Difference between revisions of "Lnc-SRL-2:4"
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sequence = <dnaseq>CCGGAGAGCAGGTGACGGCGGCCTCCGGGCATGGAGCTCGCGCTGACGAAAGGTTCTGGAAGCCGCCGTAAAAAGTAATCAAGAAACGGGTGACAGGACTTTTCGAACAAGGTCTCACCATGCTGCCCAAGCTGGTCTGAAAACTCTTGTCCTCAGGCAGTCCTCCCACCTCGGCCTCCCAAAGATCTGAGATTACAGGCATGAGCCACCACACCTGGCCTTGGTTTTAATTCCTGTCACAGTATATTAGTTTTCGCTGTTGTGTATTGATTGATTGAGACAGGGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGGGGCATGATCCCAGCTCACTGCAACCTCCACCTCTTGGATTCAAGTGATTCTCCCGTCTCAGCCTCCCGAGTAACAGGAACCACAGGTGTGTGCCAGCACGCCTGGCTAATTTTTTTTTTTTTTTTCTTGAGGTGGAGTTTCACTGTTGTTGCCCAGGTTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCTTCAGCCTCACGAGTTGTTGGGATTACAGGCGCCCGCCACCACGCCCAGGTAATTTTTGTTTAGTAGAGACGGGGTTTCACCATGTTGGCCTGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTTGTGGGATTGCAGGCGTGAGCCACTGCGCCTGGCCTAATTTTTCAATTTTTTGGTGGAGATAGGGTTTCACCATGTTGGCCAGGCTGGAGTTTTGCCTGTTCTAGAAGCTTGTATCAGTCATACAACACCCCTTTGAGGAACCGTTTGAGGTGTGGCACGATACAGCAAGTCAGCTGCCAAAGAGGGGCTTAGCCACAGGAAGTGCGTGCCCAGAACGCATCTCCCGTGTCCCTCACAGCAGTTCTATGAGGCTGGCTGCCCTGTTTGACAACTGAGGCCCGCATCTTCCCCGGAATCACCGACGTGTGGCTCTGAGCCCTGTCCCAGGGATTTTCTCCATCAGAGAAGAGGAGCACTTTGAGCTTTGAGAGGAGCAGCCCTCTGCAAGTGAAGTGGAAAAAAAGGAAGCAGGCGAGGAGGCCCATCCAGACCCTCCCCCAAGACCCTTGCTGAAATGGCTGGGATGCGGCGTGCAGAAGCTCTCCTTTCCTTCACAGCCCCTGGCTTTCCAAGAGTCCCTGCCCACCCAGATGCCCGCTGGCAGATGCAGCCTCATCTCAAGGACACTGCTTGCTGGATAAATCCCTCACCACCCTAGAGACAGCCCACGGTCCTGAGACAAGGATGCGGGCCAGGCTTGTTGCACGTAAGCGCCTCCCGCAGAAACCAGTGAGGCCGGAGTTCCAGAGGAAATGATGTAGGGACAGAGGCAGAGGGCCTCCAGGAGGCACCAGCCCCAGAGTCTTCCCTAGAATCAGACTTTAAGCACAAGCAGGGAGGGAAAGCACTTGAGCAGTGCCCGTCCCTGCATACCTGGCCTCTGCTGGAACCCATGCAGGGACAGGACACTTCTTTATCAGCAATCCTGTTCCTCTCCTGGGCAGCTTCAACCTGAACATCCTCCTTCACCTTGAGCTAAAATGGGTTTCTTGTCACCCTTGCCCATCAAACCTGGCCTTGCCCTCAGGAACCACACAGGACAAGCCTAATACTTCCTTCTTGTGGCAACACTTTAGCAATTGAGACCTGGCTGTCAGGTCCTCCAAATAAACATTTGTGACTGTGATGTTGACTTGCCGCTTCTGGGGACCTCTTCTCATTTGATCGGAGAAAGTTTTTCAGGGTTAAACCTACTTCTTTCCCCCAAGAAACTCTTCTTGTCAGGCTCACGCCTATAATCCTGGCACTTTGGGAGGCCAAGGCAGGAGGATTGTTTGAGACCAGCCTGGGCAACGTAGGTAGACTATGTTGCTACAAAAAGAAAAAGAAAAAATGGCCAGGTGTAGTAGTCCCAGCTGCTTGGAGGCTGAGGTAGGAGGTTTGCTTGAGCCCAGGAGGTCGAGGCTGCAGTGAGCTATGATTGTGCCACTGCACTCTAGCCTGGGAGACAGAATGAGGCCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGATGATGAAACTCCTCACGTATTTCTCCCCGGAGCATGTGCTCCCAGGCTCAAATCCACAGCAGCCTCGTTACACACACGTCATCCCCTGGCCCCGAGATATTGCACCGCCTTCCCCTTTCTAGCTCTGAACCCCCACATGAAGCAGCCAGACGTAGGAAAACCCAGATTCATAAAGCGCTGATATGGGTGGTCCTTTACCAAAGGATTTTCTGCTTTACAAAGTAATTCACCAAATGATTTCCCTAGAGTATGGGCAGAGATTTGCAAACTACAGCTTGGAACCAAGCTGCCTTTTTTTTATAATAAA</dnaseq>| | sequence = <dnaseq>CCGGAGAGCAGGTGACGGCGGCCTCCGGGCATGGAGCTCGCGCTGACGAAAGGTTCTGGAAGCCGCCGTAAAAAGTAATCAAGAAACGGGTGACAGGACTTTTCGAACAAGGTCTCACCATGCTGCCCAAGCTGGTCTGAAAACTCTTGTCCTCAGGCAGTCCTCCCACCTCGGCCTCCCAAAGATCTGAGATTACAGGCATGAGCCACCACACCTGGCCTTGGTTTTAATTCCTGTCACAGTATATTAGTTTTCGCTGTTGTGTATTGATTGATTGAGACAGGGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGGGGCATGATCCCAGCTCACTGCAACCTCCACCTCTTGGATTCAAGTGATTCTCCCGTCTCAGCCTCCCGAGTAACAGGAACCACAGGTGTGTGCCAGCACGCCTGGCTAATTTTTTTTTTTTTTTTCTTGAGGTGGAGTTTCACTGTTGTTGCCCAGGTTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCTTCAGCCTCACGAGTTGTTGGGATTACAGGCGCCCGCCACCACGCCCAGGTAATTTTTGTTTAGTAGAGACGGGGTTTCACCATGTTGGCCTGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTTGTGGGATTGCAGGCGTGAGCCACTGCGCCTGGCCTAATTTTTCAATTTTTTGGTGGAGATAGGGTTTCACCATGTTGGCCAGGCTGGAGTTTTGCCTGTTCTAGAAGCTTGTATCAGTCATACAACACCCCTTTGAGGAACCGTTTGAGGTGTGGCACGATACAGCAAGTCAGCTGCCAAAGAGGGGCTTAGCCACAGGAAGTGCGTGCCCAGAACGCATCTCCCGTGTCCCTCACAGCAGTTCTATGAGGCTGGCTGCCCTGTTTGACAACTGAGGCCCGCATCTTCCCCGGAATCACCGACGTGTGGCTCTGAGCCCTGTCCCAGGGATTTTCTCCATCAGAGAAGAGGAGCACTTTGAGCTTTGAGAGGAGCAGCCCTCTGCAAGTGAAGTGGAAAAAAAGGAAGCAGGCGAGGAGGCCCATCCAGACCCTCCCCCAAGACCCTTGCTGAAATGGCTGGGATGCGGCGTGCAGAAGCTCTCCTTTCCTTCACAGCCCCTGGCTTTCCAAGAGTCCCTGCCCACCCAGATGCCCGCTGGCAGATGCAGCCTCATCTCAAGGACACTGCTTGCTGGATAAATCCCTCACCACCCTAGAGACAGCCCACGGTCCTGAGACAAGGATGCGGGCCAGGCTTGTTGCACGTAAGCGCCTCCCGCAGAAACCAGTGAGGCCGGAGTTCCAGAGGAAATGATGTAGGGACAGAGGCAGAGGGCCTCCAGGAGGCACCAGCCCCAGAGTCTTCCCTAGAATCAGACTTTAAGCACAAGCAGGGAGGGAAAGCACTTGAGCAGTGCCCGTCCCTGCATACCTGGCCTCTGCTGGAACCCATGCAGGGACAGGACACTTCTTTATCAGCAATCCTGTTCCTCTCCTGGGCAGCTTCAACCTGAACATCCTCCTTCACCTTGAGCTAAAATGGGTTTCTTGTCACCCTTGCCCATCAAACCTGGCCTTGCCCTCAGGAACCACACAGGACAAGCCTAATACTTCCTTCTTGTGGCAACACTTTAGCAATTGAGACCTGGCTGTCAGGTCCTCCAAATAAACATTTGTGACTGTGATGTTGACTTGCCGCTTCTGGGGACCTCTTCTCATTTGATCGGAGAAAGTTTTTCAGGGTTAAACCTACTTCTTTCCCCCAAGAAACTCTTCTTGTCAGGCTCACGCCTATAATCCTGGCACTTTGGGAGGCCAAGGCAGGAGGATTGTTTGAGACCAGCCTGGGCAACGTAGGTAGACTATGTTGCTACAAAAAGAAAAAGAAAAAATGGCCAGGTGTAGTAGTCCCAGCTGCTTGGAGGCTGAGGTAGGAGGTTTGCTTGAGCCCAGGAGGTCGAGGCTGCAGTGAGCTATGATTGTGCCACTGCACTCTAGCCTGGGAGACAGAATGAGGCCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGATGATGAAACTCCTCACGTATTTCTCCCCGGAGCATGTGCTCCCAGGCTCAAATCCACAGCAGCCTCGTTACACACACGTCATCCCCTGGCCCCGAGATATTGCACCGCCTTCCCCTTTCTAGCTCTGAACCCCCACATGAAGCAGCCAGACGTAGGAAAACCCAGATTCATAAAGCGCTGATATGGGTGGTCCTTTACCAAAGGATTTTCTGCTTTACAAAGTAATTCACCAAATGATTTCCCTAGAGTATGGGCAGAGATTTGCAAACTACAGCTTGGAACCAAGCTGCCTTTTTTTTATAATAAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-SRL-2]] | + | [[Category:Intergenic]][[Category:lnc-SRL-2]][[Category:NONHSAG018432]][[Category:Transcripts]] |
Latest revision as of 05:23, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-SRL-2:4 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT148101 |
Classification |
intergenic |
Length |
2428 nt |
Genomic location |
chr16-:4295340..4303751 |
Exon number |
4 |
Exons |
4295340..4296861,4296974..4297062,4301323..4302035,4303648..4303751 |
Genome context |
|
Sequence |
000001 CCGGAGAGCA GGTGACGGCG GCCTCCGGGC ATGGAGCTCG CGCTGACGAA AGGTTCTGGA AGCCGCCGTA AAAAGTAATC 000080
000081 AAGAAACGGG TGACAGGACT TTTCGAACAA GGTCTCACCA TGCTGCCCAA GCTGGTCTGA AAACTCTTGT CCTCAGGCAG 000160 000161 TCCTCCCACC TCGGCCTCCC AAAGATCTGA GATTACAGGC ATGAGCCACC ACACCTGGCC TTGGTTTTAA TTCCTGTCAC 000240 000241 AGTATATTAG TTTTCGCTGT TGTGTATTGA TTGATTGAGA CAGGGTCTCG CTCTGTTGCC CAGGCTGGAG TGCAGGGGCA 000320 000321 TGATCCCAGC TCACTGCAAC CTCCACCTCT TGGATTCAAG TGATTCTCCC GTCTCAGCCT CCCGAGTAAC AGGAACCACA 000400 000401 GGTGTGTGCC AGCACGCCTG GCTAATTTTT TTTTTTTTTT TCTTGAGGTG GAGTTTCACT GTTGTTGCCC AGGTTGGAGT 000480 000481 GCAGTGGCAC AATCTCAGCT CACTGCAACC TCTGCCTCCT GGGTTCAAGT GATTCTCCTG CTTCAGCCTC ACGAGTTGTT 000560 000561 GGGATTACAG GCGCCCGCCA CCACGCCCAG GTAATTTTTG TTTAGTAGAG ACGGGGTTTC ACCATGTTGG CCTGGCTGGT 000640 000641 CTCGAACTCC TGACCTCAGG TGATCCACCC ACCTCGGCCT CCCAAAGTTG TGGGATTGCA GGCGTGAGCC ACTGCGCCTG 000720 000721 GCCTAATTTT TCAATTTTTT GGTGGAGATA GGGTTTCACC ATGTTGGCCA GGCTGGAGTT TTGCCTGTTC TAGAAGCTTG 000800 000801 TATCAGTCAT ACAACACCCC TTTGAGGAAC CGTTTGAGGT GTGGCACGAT ACAGCAAGTC AGCTGCCAAA GAGGGGCTTA 000880 000881 GCCACAGGAA GTGCGTGCCC AGAACGCATC TCCCGTGTCC CTCACAGCAG TTCTATGAGG CTGGCTGCCC TGTTTGACAA 000960 000961 CTGAGGCCCG CATCTTCCCC GGAATCACCG ACGTGTGGCT CTGAGCCCTG TCCCAGGGAT TTTCTCCATC AGAGAAGAGG 001040 001041 AGCACTTTGA GCTTTGAGAG GAGCAGCCCT CTGCAAGTGA AGTGGAAAAA AAGGAAGCAG GCGAGGAGGC CCATCCAGAC 001120 001121 CCTCCCCCAA GACCCTTGCT GAAATGGCTG GGATGCGGCG TGCAGAAGCT CTCCTTTCCT TCACAGCCCC TGGCTTTCCA 001200 001201 AGAGTCCCTG CCCACCCAGA TGCCCGCTGG CAGATGCAGC CTCATCTCAA GGACACTGCT TGCTGGATAA ATCCCTCACC 001280 001281 ACCCTAGAGA CAGCCCACGG TCCTGAGACA AGGATGCGGG CCAGGCTTGT TGCACGTAAG CGCCTCCCGC AGAAACCAGT 001360 001361 GAGGCCGGAG TTCCAGAGGA AATGATGTAG GGACAGAGGC AGAGGGCCTC CAGGAGGCAC CAGCCCCAGA GTCTTCCCTA 001440 001441 GAATCAGACT TTAAGCACAA GCAGGGAGGG AAAGCACTTG AGCAGTGCCC GTCCCTGCAT ACCTGGCCTC TGCTGGAACC 001520 001521 CATGCAGGGA CAGGACACTT CTTTATCAGC AATCCTGTTC CTCTCCTGGG CAGCTTCAAC CTGAACATCC TCCTTCACCT 001600 001601 TGAGCTAAAA TGGGTTTCTT GTCACCCTTG CCCATCAAAC CTGGCCTTGC CCTCAGGAAC CACACAGGAC AAGCCTAATA 001680 001681 CTTCCTTCTT GTGGCAACAC TTTAGCAATT GAGACCTGGC TGTCAGGTCC TCCAAATAAA CATTTGTGAC TGTGATGTTG 001760 001761 ACTTGCCGCT TCTGGGGACC TCTTCTCATT TGATCGGAGA AAGTTTTTCA GGGTTAAACC TACTTCTTTC CCCCAAGAAA 001840 001841 CTCTTCTTGT CAGGCTCACG CCTATAATCC TGGCACTTTG GGAGGCCAAG GCAGGAGGAT TGTTTGAGAC CAGCCTGGGC 001920 001921 AACGTAGGTA GACTATGTTG CTACAAAAAG AAAAAGAAAA AATGGCCAGG TGTAGTAGTC CCAGCTGCTT GGAGGCTGAG 002000 002001 GTAGGAGGTT TGCTTGAGCC CAGGAGGTCG AGGCTGCAGT GAGCTATGAT TGTGCCACTG CACTCTAGCC TGGGAGACAG 002080 002081 AATGAGGCCC TGTCTCAAAA AAAAAAAAAA AAAAAAAAAG ATGATGAAAC TCCTCACGTA TTTCTCCCCG GAGCATGTGC 002160 002161 TCCCAGGCTC AAATCCACAG CAGCCTCGTT ACACACACGT CATCCCCTGG CCCCGAGATA TTGCACCGCC TTCCCCTTTC 002240 002241 TAGCTCTGAA CCCCCACATG AAGCAGCCAG ACGTAGGAAA ACCCAGATTC ATAAAGCGCT GATATGGGTG GTCCTTTACC 002320 002321 AAAGGATTTT CTGCTTTACA AAGTAATTCA CCAAATGATT TCCCTAGAGT ATGGGCAGAG ATTTGCAAAC TACAGCTTGG 002400 002401 AACCAAGCTG CCTTTTTTTT ATAATAAA |