Difference between revisions of "Lnc-STAB2-1:2"

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sequence = <dnaseq>AGGTCTCTAACAGCGAATCCAAGACTGGGATTTTTTTAAAGCTCTCTTCCCTTCCCCACCTTGAGTGTACAATGGAGAGTGCTAGTGTGGTGTCACATGGTGCAACATGGCTCAGTGTTGTGTGAAACTAAGATTTGGGGCATATTTTATAATGAACATAACATATGAGCATAACAGTCGTGATTAACGTATACAATTAAAGATATGTGGAAATGACTCCATCTCCGACCACACATCCTCTGAGTAATTTTGATGGGGATGGCTTATGTTCTACTGCCACCTCGTGGTGGGCATTCTGTGAACATGCATCTTGGAACAGTGGGGAGAACCAGTTTGGACTTCTGAGGATCCAAAAGCCCAAGAAAAAAATCTGAGTTCTCACGACAAAGTCACTTCCTGCTACAACACCTGGAAAATGTCATGACCCGAGCTAGTCTCACTTCAGAGTCCCTGGTTTCTAGTACGGTGCCTGACAGATAGATGACTTTCTTTATATGTTGCTGAAGACAGGCAGAGAGGAAGAAAGGAAGAGAGGATAAAGGGAGGAATAAACTTGATATAAGCATCTTTGCATAATTAACAACTGGGTCAAATTTTCTTCATTTCATTGAGATTCTTGATACAAGCCTCTGCTGATGAATTGGATTCCAAAAAGATATTGTTGTCCAGGCCACACCATACGGGACTTACCACTCCCAGTTGCTAACATCTGCACGTATTTGCCTGGAGGTCTCCTCTGGTCACCAGATCCTACTCTGCCTGGGCCACATGACAAGGTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTATATATGCCCTAGCCTCCCAACCCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTCCCATCCTGTCTCCCCTTCCCCATTTCCCTACCCGTGTTTCCTGGGACCACCTCCAAAACTAAGAATTTCCCCAAGCTGTTCCTTGAAGAACCCAAACTAAGATTGCTAAAGCACTAAGCTGGAAGTGACTCAAAACCAAAAAGCCTAACATAAGCTTTTGTCTTCTTTAAGAATTCATTCTGAACTGTCTGCCAATTTCATTTTAACATTAGAAAATGATTGAAAATGTTAAATTGGCCTTGCTTGACTTCAACATTTGACACAGTTACTCCAAGGATACATACATTGCGCTATAGAATTCCTCTATTTTTTTGCTATCCCTCCATCAAGTGGTGAGTTCTGACTCCAAAATATGTTTTAGATCAGTCCTCTACTCTCCATTTCCACTGCCAGCCCCCTAGTCCATCCCATGCCATCTCTTGCTAGACTGGTCATCACTTGCTAGACTGTCACCAAATCCTCCTGACTGGCCCATCCCCGATTCCACTCTTGACCCTTCCAATCTATTATTTCATAGCAACTAAGAAAAATGTTTAAAAATATAAATCAATTGATATCACTTCCTTCATTAAAACCTAGCTTCCCATTGCACATAGAATGAAATCCCAAGTCCTTCTTGTGGACTAAAAGACTTCTCCCACTTCTGTTTTAACTCACTGTACCCTTCACTCACGGTACTCCAGGAACCTTAATGTCCTCTCTGTTCCCAGAATGGATCCAGCCTGTCCAGGCCTTTGTGCTTGCTCTTCCCTCTTCCTGAATATTCTGACCTGGCTCTGTGTGTGTCTACTTCCTCCTCATCTCTCAGATCTCCTTTGCAAAAGGGCTTCCCCAATGATTTAATTTAATATCATCTTTTCATGTACCCCAAATGTCATTCTCTAGCACTGTATTCTGTTTATTTCCTTCATAGAATCTACAGTAAATTCTAATCGTTTCAGGTTTTTGTTTATTTACTCATTCAAAAACACATAGACTCAGTCCCTATTATCCCTACGGTGGGCCAGGCCTAGACCCTTGACAGGTGCGGGAGGTACACAGTGATCAAAAACAGACCCTACCTACATTAGGGAGAGAATTTAGTGAGAGAGACTGATGTTAAACAAATAATAACATATGCAGTTTTAAAGCTGACACTGTAAGAAGTGTTATATACAGAGCCCTATGAGAAGTCAAATTAGAAAATTTTGGCCTACTTAGGGATGGCATCCCCAAGGAAGTAAACAATGAGCTGGGGCCTGTGTAGGCAAAGGTTAACTCAGCAAACCTGGGTTGTTCAAACCCTGCACATTTTCAGGAAAAGCCTGTCTTCAGGAATGACCCTGGGAAAAGAGCTCTGAGGCTTTGGAATGCCCTGCCTGATAAGAGTGTGTCTTTATGCCCAAAGCCTTGGGCAACACGGTACCAGTTTGATCACATAGTTTATGTTAACAGTGAGATTTATGGTGAATGCCTGCTCTTGCTCTAGGAGGTTGAAGTCTGAGTAGCCAACATCAATCCTGCAGGTACTACATGCCAATGCAACTGGCCCCCAATTAAAAATTCTGGACACTCACTCAGGGGAGATTCCTAGTTGGTAGCACTTTACTCAGGCAGTCACACACTATTGCTGGAAGAATGAAGTGTGCCCATGTGACGCCACTGGAGGAGGACACCTGGAAACTTGGGCCTGTTTTTTCCTGGACTTTGCCCCAAGTGCTTTTTCCCCTTTCTGGTTTGAATCTGTATCCTTTCACTGTAAGAAATTTCCACCTTGAGCATGACAGCTTTTCTGAGTCCTGTGAGTTCTAGCAAATCATTAAGCCTAAGGATGGTCTCAGGGACCCTGACACAGCACCAAAGAGAGTGTTTAAGGCAGAGAAAACAGCAGACTCAAAAACCCCGTGACATCCCTGAGCATCTCGACATGAGAAGTGTAACAAAAGCTGGTTAGGTGGGAATGGAAGAGAAAGCAGGTGTGTGACACTAGGTGTCCACATTCTCTCTTCACTGGTGAATGGACACCTGTGATTGTTGTTCACTGTTGGCATCACCACCACATACCATTATGCTTGGCATGTCATTGATGCCCAAGAGTATCCATTAAATAAATGAATTAT</dnaseq>|
 
sequence = <dnaseq>AGGTCTCTAACAGCGAATCCAAGACTGGGATTTTTTTAAAGCTCTCTTCCCTTCCCCACCTTGAGTGTACAATGGAGAGTGCTAGTGTGGTGTCACATGGTGCAACATGGCTCAGTGTTGTGTGAAACTAAGATTTGGGGCATATTTTATAATGAACATAACATATGAGCATAACAGTCGTGATTAACGTATACAATTAAAGATATGTGGAAATGACTCCATCTCCGACCACACATCCTCTGAGTAATTTTGATGGGGATGGCTTATGTTCTACTGCCACCTCGTGGTGGGCATTCTGTGAACATGCATCTTGGAACAGTGGGGAGAACCAGTTTGGACTTCTGAGGATCCAAAAGCCCAAGAAAAAAATCTGAGTTCTCACGACAAAGTCACTTCCTGCTACAACACCTGGAAAATGTCATGACCCGAGCTAGTCTCACTTCAGAGTCCCTGGTTTCTAGTACGGTGCCTGACAGATAGATGACTTTCTTTATATGTTGCTGAAGACAGGCAGAGAGGAAGAAAGGAAGAGAGGATAAAGGGAGGAATAAACTTGATATAAGCATCTTTGCATAATTAACAACTGGGTCAAATTTTCTTCATTTCATTGAGATTCTTGATACAAGCCTCTGCTGATGAATTGGATTCCAAAAAGATATTGTTGTCCAGGCCACACCATACGGGACTTACCACTCCCAGTTGCTAACATCTGCACGTATTTGCCTGGAGGTCTCCTCTGGTCACCAGATCCTACTCTGCCTGGGCCACATGACAAGGTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTATATATGCCCTAGCCTCCCAACCCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTCCCATCCTGTCTCCCCTTCCCCATTTCCCTACCCGTGTTTCCTGGGACCACCTCCAAAACTAAGAATTTCCCCAAGCTGTTCCTTGAAGAACCCAAACTAAGATTGCTAAAGCACTAAGCTGGAAGTGACTCAAAACCAAAAAGCCTAACATAAGCTTTTGTCTTCTTTAAGAATTCATTCTGAACTGTCTGCCAATTTCATTTTAACATTAGAAAATGATTGAAAATGTTAAATTGGCCTTGCTTGACTTCAACATTTGACACAGTTACTCCAAGGATACATACATTGCGCTATAGAATTCCTCTATTTTTTTGCTATCCCTCCATCAAGTGGTGAGTTCTGACTCCAAAATATGTTTTAGATCAGTCCTCTACTCTCCATTTCCACTGCCAGCCCCCTAGTCCATCCCATGCCATCTCTTGCTAGACTGGTCATCACTTGCTAGACTGTCACCAAATCCTCCTGACTGGCCCATCCCCGATTCCACTCTTGACCCTTCCAATCTATTATTTCATAGCAACTAAGAAAAATGTTTAAAAATATAAATCAATTGATATCACTTCCTTCATTAAAACCTAGCTTCCCATTGCACATAGAATGAAATCCCAAGTCCTTCTTGTGGACTAAAAGACTTCTCCCACTTCTGTTTTAACTCACTGTACCCTTCACTCACGGTACTCCAGGAACCTTAATGTCCTCTCTGTTCCCAGAATGGATCCAGCCTGTCCAGGCCTTTGTGCTTGCTCTTCCCTCTTCCTGAATATTCTGACCTGGCTCTGTGTGTGTCTACTTCCTCCTCATCTCTCAGATCTCCTTTGCAAAAGGGCTTCCCCAATGATTTAATTTAATATCATCTTTTCATGTACCCCAAATGTCATTCTCTAGCACTGTATTCTGTTTATTTCCTTCATAGAATCTACAGTAAATTCTAATCGTTTCAGGTTTTTGTTTATTTACTCATTCAAAAACACATAGACTCAGTCCCTATTATCCCTACGGTGGGCCAGGCCTAGACCCTTGACAGGTGCGGGAGGTACACAGTGATCAAAAACAGACCCTACCTACATTAGGGAGAGAATTTAGTGAGAGAGACTGATGTTAAACAAATAATAACATATGCAGTTTTAAAGCTGACACTGTAAGAAGTGTTATATACAGAGCCCTATGAGAAGTCAAATTAGAAAATTTTGGCCTACTTAGGGATGGCATCCCCAAGGAAGTAAACAATGAGCTGGGGCCTGTGTAGGCAAAGGTTAACTCAGCAAACCTGGGTTGTTCAAACCCTGCACATTTTCAGGAAAAGCCTGTCTTCAGGAATGACCCTGGGAAAAGAGCTCTGAGGCTTTGGAATGCCCTGCCTGATAAGAGTGTGTCTTTATGCCCAAAGCCTTGGGCAACACGGTACCAGTTTGATCACATAGTTTATGTTAACAGTGAGATTTATGGTGAATGCCTGCTCTTGCTCTAGGAGGTTGAAGTCTGAGTAGCCAACATCAATCCTGCAGGTACTACATGCCAATGCAACTGGCCCCCAATTAAAAATTCTGGACACTCACTCAGGGGAGATTCCTAGTTGGTAGCACTTTACTCAGGCAGTCACACACTATTGCTGGAAGAATGAAGTGTGCCCATGTGACGCCACTGGAGGAGGACACCTGGAAACTTGGGCCTGTTTTTTCCTGGACTTTGCCCCAAGTGCTTTTTCCCCTTTCTGGTTTGAATCTGTATCCTTTCACTGTAAGAAATTTCCACCTTGAGCATGACAGCTTTTCTGAGTCCTGTGAGTTCTAGCAAATCATTAAGCCTAAGGATGGTCTCAGGGACCCTGACACAGCACCAAAGAGAGTGTTTAAGGCAGAGAAAACAGCAGACTCAAAAACCCCGTGACATCCCTGAGCATCTCGACATGAGAAGTGTAACAAAAGCTGGTTAGGTGGGAATGGAAGAGAAAGCAGGTGTGTGACACTAGGTGTCCACATTCTCTCTTCACTGGTGAATGGACACCTGTGATTGTTGTTCACTGTTGGCATCACCACCACATACCATTATGCTTGGCATGTCATTGATGCCCAAGAGTATCCATTAAATAAATGAATTAT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-STAB2-1]][[Category:Transcripts]]

Latest revision as of 05:24, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-STAB2-1:2

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

3053 nt

Genomic location

chr12+:103941572..103953587

Exon number

5

Exons

103941572..103941703,103942446..103942758,103943276..103943375,103944240..103944349,103951190..103953587

Genome context

Sequence
000001 AGGTCTCTAA CAGCGAATCC AAGACTGGGA TTTTTTTAAA GCTCTCTTCC CTTCCCCACC TTGAGTGTAC AATGGAGAGT 000080
000081 GCTAGTGTGG TGTCACATGG TGCAACATGG CTCAGTGTTG TGTGAAACTA AGATTTGGGG CATATTTTAT AATGAACATA 000160
000161 ACATATGAGC ATAACAGTCG TGATTAACGT ATACAATTAA AGATATGTGG AAATGACTCC ATCTCCGACC ACACATCCTC 000240
000241 TGAGTAATTT TGATGGGGAT GGCTTATGTT CTACTGCCAC CTCGTGGTGG GCATTCTGTG AACATGCATC TTGGAACAGT 000320
000321 GGGGAGAACC AGTTTGGACT TCTGAGGATC CAAAAGCCCA AGAAAAAAAT CTGAGTTCTC ACGACAAAGT CACTTCCTGC 000400
000401 TACAACACCT GGAAAATGTC ATGACCCGAG CTAGTCTCAC TTCAGAGTCC CTGGTTTCTA GTACGGTGCC TGACAGATAG 000480
000481 ATGACTTTCT TTATATGTTG CTGAAGACAG GCAGAGAGGA AGAAAGGAAG AGAGGATAAA GGGAGGAATA AACTTGATAT 000560
000561 AAGCATCTTT GCATAATTAA CAACTGGGTC AAATTTTCTT CATTTCATTG AGATTCTTGA TACAAGCCTC TGCTGATGAA 000640
000641 TTGGATTCCA AAAAGATATT GTTGTCCAGG CCACACCATA CGGGACTTAC CACTCCCAGT TGCTAACATC TGCACGTATT 000720
000721 TGCCTGGAGG TCTCCTCTGG TCACCAGATC CTACTCTGCC TGGGCCACAT GACAAGGTGA TGTGCTGAGG AACAAAAGCC 000800
000801 CCCAGGAGTA TCCCTCAAGC AGTGTTGGAC TGGAGTTGAG GTATATATGC CCTAGCCTCC CAACCCTGGG CTGAGATTCC 000880
000881 CAAACAACTG GGTTCCCTGG CAGGACCCAG CCCCACATAC CCAAAACACT AAACTGCTTA ATGATGGACA CTTCCCATCC 000960
000961 TGTCTCCCCT TCCCCATTTC CCTACCCGTG TTTCCTGGGA CCACCTCCAA AACTAAGAAT TTCCCCAAGC TGTTCCTTGA 001040
001041 AGAACCCAAA CTAAGATTGC TAAAGCACTA AGCTGGAAGT GACTCAAAAC CAAAAAGCCT AACATAAGCT TTTGTCTTCT 001120
001121 TTAAGAATTC ATTCTGAACT GTCTGCCAAT TTCATTTTAA CATTAGAAAA TGATTGAAAA TGTTAAATTG GCCTTGCTTG 001200
001201 ACTTCAACAT TTGACACAGT TACTCCAAGG ATACATACAT TGCGCTATAG AATTCCTCTA TTTTTTTGCT ATCCCTCCAT 001280
001281 CAAGTGGTGA GTTCTGACTC CAAAATATGT TTTAGATCAG TCCTCTACTC TCCATTTCCA CTGCCAGCCC CCTAGTCCAT 001360
001361 CCCATGCCAT CTCTTGCTAG ACTGGTCATC ACTTGCTAGA CTGTCACCAA ATCCTCCTGA CTGGCCCATC CCCGATTCCA 001440
001441 CTCTTGACCC TTCCAATCTA TTATTTCATA GCAACTAAGA AAAATGTTTA AAAATATAAA TCAATTGATA TCACTTCCTT 001520
001521 CATTAAAACC TAGCTTCCCA TTGCACATAG AATGAAATCC CAAGTCCTTC TTGTGGACTA AAAGACTTCT CCCACTTCTG 001600
001601 TTTTAACTCA CTGTACCCTT CACTCACGGT ACTCCAGGAA CCTTAATGTC CTCTCTGTTC CCAGAATGGA TCCAGCCTGT 001680
001681 CCAGGCCTTT GTGCTTGCTC TTCCCTCTTC CTGAATATTC TGACCTGGCT CTGTGTGTGT CTACTTCCTC CTCATCTCTC 001760
001761 AGATCTCCTT TGCAAAAGGG CTTCCCCAAT GATTTAATTT AATATCATCT TTTCATGTAC CCCAAATGTC ATTCTCTAGC 001840
001841 ACTGTATTCT GTTTATTTCC TTCATAGAAT CTACAGTAAA TTCTAATCGT TTCAGGTTTT TGTTTATTTA CTCATTCAAA 001920
001921 AACACATAGA CTCAGTCCCT ATTATCCCTA CGGTGGGCCA GGCCTAGACC CTTGACAGGT GCGGGAGGTA CACAGTGATC 002000
002001 AAAAACAGAC CCTACCTACA TTAGGGAGAG AATTTAGTGA GAGAGACTGA TGTTAAACAA ATAATAACAT ATGCAGTTTT 002080
002081 AAAGCTGACA CTGTAAGAAG TGTTATATAC AGAGCCCTAT GAGAAGTCAA ATTAGAAAAT TTTGGCCTAC TTAGGGATGG 002160
002161 CATCCCCAAG GAAGTAAACA ATGAGCTGGG GCCTGTGTAG GCAAAGGTTA ACTCAGCAAA CCTGGGTTGT TCAAACCCTG 002240
002241 CACATTTTCA GGAAAAGCCT GTCTTCAGGA ATGACCCTGG GAAAAGAGCT CTGAGGCTTT GGAATGCCCT GCCTGATAAG 002320
002321 AGTGTGTCTT TATGCCCAAA GCCTTGGGCA ACACGGTACC AGTTTGATCA CATAGTTTAT GTTAACAGTG AGATTTATGG 002400
002401 TGAATGCCTG CTCTTGCTCT AGGAGGTTGA AGTCTGAGTA GCCAACATCA ATCCTGCAGG TACTACATGC CAATGCAACT 002480
002481 GGCCCCCAAT TAAAAATTCT GGACACTCAC TCAGGGGAGA TTCCTAGTTG GTAGCACTTT ACTCAGGCAG TCACACACTA 002560
002561 TTGCTGGAAG AATGAAGTGT GCCCATGTGA CGCCACTGGA GGAGGACACC TGGAAACTTG GGCCTGTTTT TTCCTGGACT 002640
002641 TTGCCCCAAG TGCTTTTTCC CCTTTCTGGT TTGAATCTGT ATCCTTTCAC TGTAAGAAAT TTCCACCTTG AGCATGACAG 002720
002721 CTTTTCTGAG TCCTGTGAGT TCTAGCAAAT CATTAAGCCT AAGGATGGTC TCAGGGACCC TGACACAGCA CCAAAGAGAG 002800
002801 TGTTTAAGGC AGAGAAAACA GCAGACTCAA AAACCCCGTG ACATCCCTGA GCATCTCGAC ATGAGAAGTG TAACAAAAGC 002880
002881 TGGTTAGGTG GGAATGGAAG AGAAAGCAGG TGTGTGACAC TAGGTGTCCA CATTCTCTCT TCACTGGTGA ATGGACACCT 002960
002961 GTGATTGTTG TTCACTGTTG GCATCACCAC CACATACCAT TATGCTTGGC ATGTCATTGA TGCCCAAGAG TATCCATTAA 003040
003041 ATAAATGAAT TAT
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