Difference between revisions of "Lnc-TMEM132C-2:2"
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sequence = <dnaseq>CTGGAAACAAATGCACTTAACCAGAAAAACAGGGACATCAACCAGCAAAGATGCATCCTCATTTAATAGAGCTTGAAATTACTATAATCTGTAAAGTACAGCGAGAAGAAGAAGTTTCACCTGCCTGCACATCTGTCGTTGACTCTCCATCTGACTTGGAGGGACTCTGAGGGACCAACCTGAGCCTGAGAAGAGGCAAGATTCCCCTTCAAGGACACACTGGGAACTTACGGACCTCTTTCTCCATGGTGCAGAGCGCAGAGGTGAACAAACAGACGCATAATAGCTCTTGAGCTTGCCATTGGGAAGTGAAAATCAACTGCTTGAATAAATGTAAGGACTCAGGTAGACATCACCTTGTGACTCAACAGCAGCCAATAAGATGGAAATAAAGGCCATGAAGTTATCGGATGGCATCTACAAGGAATACTTAGATGAGGAGGTGACTCTGGTAGCAATTGTTCTTTTGTCTTTCTCACCTTCCTTCTTGTCCTGTCTGGGATGCTGAAGTGATGGCTGGTATACAGATGCCCTGTTGTGATGTTGAGATAAACATGAGAATAAAAGTCGGCGATTACAGATGGCAGAGAAGAGAGAGAAAGATAGGATGTAGGTGGATATTGACGGAACTAAGTTTCTATTGCACAAGTTCTACCACCAACCTCTGGACTTCATGATATGTGAGGGAGAAATAAACTCCTATTTTAGAAGAGATCTATGTTACCTGCAACTGAACGGAATGCTTAATTGGCACATCCTATGTGCTCCAAACCTTCCTTAATTTCTGTGTGTAAGGCATACTTAGTCTTTACCCATTATTCTGTTCACATTCATTCACTTGATCAGCCTCCCAACTCTATGGTAAAGAGTTTACTACAGTTTACTCTATTAGTAAGGGAGATTCTGGAGCAAGCCCCACAAATCATAGATTGAATACCCATTCATTAAGAGAGAGATTTAAAGATACTTCTATCCAAACACATTTTAAATTTCCAGCACCTTTGAGGTGGTGGAGGTTCATGGTGGTTGATAGGGTTTAAATGACTTGTGATTCAAGCTCCATATTACAATGTAACAGTGCAAAAGTTCATTTTTTTAAATTTATTTTACTTTAAGTTCTGGTATACATGTGTAGAACATGCGGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCTATCAAACCGTCACCTAGGTTTTAAGAACCACATGCATTAGGTATTTGACCTAATGCTCTCCCTCATGTTGCCCCCCAACTCCCTGACAGGGCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTTGATTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTCATTCTTTTTTATGGCTTCATAATATTCCATGAGTCTGGATTTGGTTACAGATAGAGCTGGACAAGCCTTAGCTATATCTAATGGCTTTTGACATGTTATATCAATTTCTTACTGCTTTTGTAAATGAATATATTAAGAAGAAAAAATTACAAATGACCCTTTCTTCACAAACTTTTAGGGTAATCAAGTTCAGTTATTAAAAAATGGATGTTTGCAACATTCATAGTAATTATTTTCAGAAAATTAAAAATGATTAAAAATTATATTTTCATCCCATTCAGATATTATATATTTAACTGTGAGATAATTCTCAGAGATAAATGTCAACTTTTAAAAAATGCTAAATAAATTAAATCAAAATATCCCCTCTAAAATAAATAAATTAGCTCCGATTATTTCTTCTTTTTAAATTTTTCCTTATAGTTGTAAAAATAAAGTGAACGTTTTGGCTCATTTCCTCATTAAAGTTTGAATTTTCCAGTC</dnaseq>| | sequence = <dnaseq>CTGGAAACAAATGCACTTAACCAGAAAAACAGGGACATCAACCAGCAAAGATGCATCCTCATTTAATAGAGCTTGAAATTACTATAATCTGTAAAGTACAGCGAGAAGAAGAAGTTTCACCTGCCTGCACATCTGTCGTTGACTCTCCATCTGACTTGGAGGGACTCTGAGGGACCAACCTGAGCCTGAGAAGAGGCAAGATTCCCCTTCAAGGACACACTGGGAACTTACGGACCTCTTTCTCCATGGTGCAGAGCGCAGAGGTGAACAAACAGACGCATAATAGCTCTTGAGCTTGCCATTGGGAAGTGAAAATCAACTGCTTGAATAAATGTAAGGACTCAGGTAGACATCACCTTGTGACTCAACAGCAGCCAATAAGATGGAAATAAAGGCCATGAAGTTATCGGATGGCATCTACAAGGAATACTTAGATGAGGAGGTGACTCTGGTAGCAATTGTTCTTTTGTCTTTCTCACCTTCCTTCTTGTCCTGTCTGGGATGCTGAAGTGATGGCTGGTATACAGATGCCCTGTTGTGATGTTGAGATAAACATGAGAATAAAAGTCGGCGATTACAGATGGCAGAGAAGAGAGAGAAAGATAGGATGTAGGTGGATATTGACGGAACTAAGTTTCTATTGCACAAGTTCTACCACCAACCTCTGGACTTCATGATATGTGAGGGAGAAATAAACTCCTATTTTAGAAGAGATCTATGTTACCTGCAACTGAACGGAATGCTTAATTGGCACATCCTATGTGCTCCAAACCTTCCTTAATTTCTGTGTGTAAGGCATACTTAGTCTTTACCCATTATTCTGTTCACATTCATTCACTTGATCAGCCTCCCAACTCTATGGTAAAGAGTTTACTACAGTTTACTCTATTAGTAAGGGAGATTCTGGAGCAAGCCCCACAAATCATAGATTGAATACCCATTCATTAAGAGAGAGATTTAAAGATACTTCTATCCAAACACATTTTAAATTTCCAGCACCTTTGAGGTGGTGGAGGTTCATGGTGGTTGATAGGGTTTAAATGACTTGTGATTCAAGCTCCATATTACAATGTAACAGTGCAAAAGTTCATTTTTTTAAATTTATTTTACTTTAAGTTCTGGTATACATGTGTAGAACATGCGGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCTATCAAACCGTCACCTAGGTTTTAAGAACCACATGCATTAGGTATTTGACCTAATGCTCTCCCTCATGTTGCCCCCCAACTCCCTGACAGGGCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTTGATTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTCATTCTTTTTTATGGCTTCATAATATTCCATGAGTCTGGATTTGGTTACAGATAGAGCTGGACAAGCCTTAGCTATATCTAATGGCTTTTGACATGTTATATCAATTTCTTACTGCTTTTGTAAATGAATATATTAAGAAGAAAAAATTACAAATGACCCTTTCTTCACAAACTTTTAGGGTAATCAAGTTCAGTTATTAAAAAATGGATGTTTGCAACATTCATAGTAATTATTTTCAGAAAATTAAAAATGATTAAAAATTATATTTTCATCCCATTCAGATATTATATATTTAACTGTGAGATAATTCTCAGAGATAAATGTCAACTTTTAAAAAATGCTAAATAAATTAAATCAAAATATCCCCTCTAAAATAAATAAATTAGCTCCGATTATTTCTTCTTTTTAAATTTTTCCTTATAGTTGTAAAAATAAAGTGAACGTTTTGGCTCATTTCCTCATTAAAGTTTGAATTTTCCAGTC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-TMEM132C-2]] | + | [[Category:Intergenic]][[Category:lnc-TMEM132C-2]][[Category:Transcripts]] |
Latest revision as of 05:30, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-TMEM132C-2:2 |
| Source |
LNCipedia2.1 |
| Same with |
, |
| Classification |
intergenic |
| Length |
1923 nt |
| Genomic location |
chr12+:128399965..128436096 |
| Exon number |
3 |
| Exons |
128399965..128400227,128429263..128429344,128434519..128436096 |
| Genome context |
|
| Sequence |
000001 CTGGAAACAA ATGCACTTAA CCAGAAAAAC AGGGACATCA ACCAGCAAAG ATGCATCCTC ATTTAATAGA GCTTGAAATT 000080
000081 ACTATAATCT GTAAAGTACA GCGAGAAGAA GAAGTTTCAC CTGCCTGCAC ATCTGTCGTT GACTCTCCAT CTGACTTGGA 000160 000161 GGGACTCTGA GGGACCAACC TGAGCCTGAG AAGAGGCAAG ATTCCCCTTC AAGGACACAC TGGGAACTTA CGGACCTCTT 000240 000241 TCTCCATGGT GCAGAGCGCA GAGGTGAACA AACAGACGCA TAATAGCTCT TGAGCTTGCC ATTGGGAAGT GAAAATCAAC 000320 000321 TGCTTGAATA AATGTAAGGA CTCAGGTAGA CATCACCTTG TGACTCAACA GCAGCCAATA AGATGGAAAT AAAGGCCATG 000400 000401 AAGTTATCGG ATGGCATCTA CAAGGAATAC TTAGATGAGG AGGTGACTCT GGTAGCAATT GTTCTTTTGT CTTTCTCACC 000480 000481 TTCCTTCTTG TCCTGTCTGG GATGCTGAAG TGATGGCTGG TATACAGATG CCCTGTTGTG ATGTTGAGAT AAACATGAGA 000560 000561 ATAAAAGTCG GCGATTACAG ATGGCAGAGA AGAGAGAGAA AGATAGGATG TAGGTGGATA TTGACGGAAC TAAGTTTCTA 000640 000641 TTGCACAAGT TCTACCACCA ACCTCTGGAC TTCATGATAT GTGAGGGAGA AATAAACTCC TATTTTAGAA GAGATCTATG 000720 000721 TTACCTGCAA CTGAACGGAA TGCTTAATTG GCACATCCTA TGTGCTCCAA ACCTTCCTTA ATTTCTGTGT GTAAGGCATA 000800 000801 CTTAGTCTTT ACCCATTATT CTGTTCACAT TCATTCACTT GATCAGCCTC CCAACTCTAT GGTAAAGAGT TTACTACAGT 000880 000881 TTACTCTATT AGTAAGGGAG ATTCTGGAGC AAGCCCCACA AATCATAGAT TGAATACCCA TTCATTAAGA GAGAGATTTA 000960 000961 AAGATACTTC TATCCAAACA CATTTTAAAT TTCCAGCACC TTTGAGGTGG TGGAGGTTCA TGGTGGTTGA TAGGGTTTAA 001040 001041 ATGACTTGTG ATTCAAGCTC CATATTACAA TGTAACAGTG CAAAAGTTCA TTTTTTTAAA TTTATTTTAC TTTAAGTTCT 001120 001121 GGTATACATG TGTAGAACAT GCGGGTTTGT TACATAGGTA TACATGTGCC ATGGTGGTTT GCTGCACCTA TCAAACCGTC 001200 001201 ACCTAGGTTT TAAGAACCAC ATGCATTAGG TATTTGACCT AATGCTCTCC CTCATGTTGC CCCCCAACTC CCTGACAGGG 001280 001281 CCCAGTGTGT GATGTTCCCC TCCCTGTGTC CATGTGTTCT CATTGTTCAA CTCCCACTTA TGAGTGAGAA CATGTGGTGT 001360 001361 TTGATTTTCT GTTCCTGTGT TAGTTTGCTG AGAATGATGG CTTCCAGCTT CATCCATGTC CCTGCAAAGG ACACGAACTC 001440 001441 ATTCTTTTTT ATGGCTTCAT AATATTCCAT GAGTCTGGAT TTGGTTACAG ATAGAGCTGG ACAAGCCTTA GCTATATCTA 001520 001521 ATGGCTTTTG ACATGTTATA TCAATTTCTT ACTGCTTTTG TAAATGAATA TATTAAGAAG AAAAAATTAC AAATGACCCT 001600 001601 TTCTTCACAA ACTTTTAGGG TAATCAAGTT CAGTTATTAA AAAATGGATG TTTGCAACAT TCATAGTAAT TATTTTCAGA 001680 001681 AAATTAAAAA TGATTAAAAA TTATATTTTC ATCCCATTCA GATATTATAT ATTTAACTGT GAGATAATTC TCAGAGATAA 001760 001761 ATGTCAACTT TTAAAAAATG CTAAATAAAT TAAATCAAAA TATCCCCTCT AAAATAAATA AATTAGCTCC GATTATTTCT 001840 001841 TCTTTTTAAA TTTTTCCTTA TAGTTGTAAA AATAAAGTGA ACGTTTTGGC TCATTTCCTC ATTAAAGTTT GAATTTTCCA 001920 001921 GTC |