Difference between revisions of "Lnc-ZNF83-1:1"

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sequence = <dnaseq>GGGCCGGGACAAAGCCTGGGCCGGGCCTGCGCTTCCGTTCGCTTGACTGGCTGCGCTTGTTTTCAGGGTTTTGGTCTGAAAACGGATCTTACCTGCGCAGAGCAAAATCGGTTGTAGATTATATCCACGAAAATTCCTTCTATTAAAATGAATTTCAAGTCCCACCTACCCTGGAAGCAGAAAGAGAGAGAAGAGAGAGAGTAAAGAGAAAGAGAAAAGAAAGAGAAGTTGAAAAAGAGAAAGAAAACCAAGAAAGAAAGAGAAAAAAACCGAAAATAAATGGACAAGAAAGAAAAAGATGTAGTCTGGTTTTGTTGCCCAGGCTGGTCTCCAGCTTCTAGCCTCAAGCAGTCTTCCCATCTGCTCCTACCAAAGTGCTCGGATTATAGGCATGAATCACCTTGCATGGGAGATAAGGACCCCCACATCAAGCCCTCAGGTCACTGGGATCCTGGACTACGGCACTGCTCCAGGCAGGCCTGGTTATCCTGCTTGAGGCAGCAATCCTCTTGAGCCTAGTGAAATGCAACTGGCTGTACCTCAATGATGTTGCCCTGAGATTCTGCCAGTCGAGGTATTACTTCAATCTCCTGAGACCAGCCTCTACCTCCAGATCCAGGGAGGCCAACGTGCCATGCATCCCTGGAGCATGAAACCCCCGATCAAGGAGGAAAAAGGCAGGAGAAAGTCAGGAGAGGGGCAGGGTCTGCAGGATCCCAGGACCAGGAAGAGTTCACGGCCTCCCTGGGACTGGGGCTGCGTCGCTGCGCTCCAGGAGCTGACGAGGGAGCGGAGCAGATGGGAAGCTCCCAGGGCGGGAATCAACCTTGCGGTGAGGACTTTAAAAAAGGTGCGGGCCAGTGCAGGGGACACTGAAGGATTTGAGGCAGGAAAACTCCGCGATAAGAGCTGTCTATATGGCCCTGTGGCAGAAGCACGGGGGACACGACCCCATGGAACTGTGTCCATTAAACCTCTTTGTCTTCATAAATTACCCAGTCTCGGGTATTTCTTTATTAGCAGCGTGAGAACAGACTAATACAGTAAATTGGTAATGGTATAGAGTGGGGTGCTGCTATAAGGATACCTCAAAATGTGGAAGCAAATTTTGAACTGGGTAACAGGCAAAGGCTGGAACAGTTTGGAGGGCTCAAAAGAAGACAGGAAGACGTGGGAAAGTTTGGAGCTTCCTAGAAAATGGTTGTTGAATGGTTCTGACCAAAAAGTCCAGGCTGAAGGTGGTCTCAGATGGAGATGAGGAACTTTATTGGAACTGGAGCAGAGGTGAGCTGCAGGGGCGGAGCCCTCATGGAGAACCTCTGCTAGAGCAGTGCAGAAGTAAAATGTGGGGTTGGAGCCCCCACACAGACTACTCACTACTCGCCTAGTGCAGCCGTGAGAAAAGGGCCACCCTCCTATAGACCCCAGAATGGTAGATTCACCGACAGCTTGCACCATGTGCCTGGAAAAGTAGCAGACACAACACCAGCCTGTGAAAGCAGCCAGGAGAGGAGCTGTACCCTGCAAAGTCACAGGGGCAGACATGGGTTCCCTGCAAGACCACTGGAACCAACCTCTTGCATAAGTGTGACCTGGATGTGAGACACGGAGTCAAAAGAGATCATTTTGGAGCTTTGACTGCCCTGCTGGATTTCAGACTGGCATGGGGCCTGTGACCTGTTTTGGCCAATTTCTCCCATTTGCAACGGGCGTTATTTATCCAATACCTGTGCCTCCATTGTACCTAGGAAATAACTAACTTGCTTTTTATTTTACAGGCTCATAAACAGAAGAGACTTGCTTGTCTCAGATGAAACTTTGGACTGTGGACTTTTGAGTTAATGCTGAAATAAGACTTTGGGGGACTGTTGGGGAGGCATGATTGGTTTTGAAATGTGAGGACATGAGATTTGGGAGGGACCAGGGGCAAAATGATATGGTTTGGCTGTGTCCCCACCAAATCTCATCTTGAATTGCAGCTCCCATGATCCCCACATGTGGGAGGGACCCGGGGGGAGGTAACTGAATCATGGGGGTGGGATTTTCCCATGCTGTTCTCATGATAGTGAATAAATCTCATGAGATCTTATGGTTTTATAAAGGGCAGTTTCCCTGCACGGGCTCTCTCTTGCCCGCCACCACGTAAGACATGTGTTTGCTCCTCCTTCACCTTCTGCCATGATTGTGAGGTCTCTCTAGCCGTGTGAAACTGTGAGTCCATTAAACTTCTTTTTCTTTAT</dnaseq>|
 
sequence = <dnaseq>GGGCCGGGACAAAGCCTGGGCCGGGCCTGCGCTTCCGTTCGCTTGACTGGCTGCGCTTGTTTTCAGGGTTTTGGTCTGAAAACGGATCTTACCTGCGCAGAGCAAAATCGGTTGTAGATTATATCCACGAAAATTCCTTCTATTAAAATGAATTTCAAGTCCCACCTACCCTGGAAGCAGAAAGAGAGAGAAGAGAGAGAGTAAAGAGAAAGAGAAAAGAAAGAGAAGTTGAAAAAGAGAAAGAAAACCAAGAAAGAAAGAGAAAAAAACCGAAAATAAATGGACAAGAAAGAAAAAGATGTAGTCTGGTTTTGTTGCCCAGGCTGGTCTCCAGCTTCTAGCCTCAAGCAGTCTTCCCATCTGCTCCTACCAAAGTGCTCGGATTATAGGCATGAATCACCTTGCATGGGAGATAAGGACCCCCACATCAAGCCCTCAGGTCACTGGGATCCTGGACTACGGCACTGCTCCAGGCAGGCCTGGTTATCCTGCTTGAGGCAGCAATCCTCTTGAGCCTAGTGAAATGCAACTGGCTGTACCTCAATGATGTTGCCCTGAGATTCTGCCAGTCGAGGTATTACTTCAATCTCCTGAGACCAGCCTCTACCTCCAGATCCAGGGAGGCCAACGTGCCATGCATCCCTGGAGCATGAAACCCCCGATCAAGGAGGAAAAAGGCAGGAGAAAGTCAGGAGAGGGGCAGGGTCTGCAGGATCCCAGGACCAGGAAGAGTTCACGGCCTCCCTGGGACTGGGGCTGCGTCGCTGCGCTCCAGGAGCTGACGAGGGAGCGGAGCAGATGGGAAGCTCCCAGGGCGGGAATCAACCTTGCGGTGAGGACTTTAAAAAAGGTGCGGGCCAGTGCAGGGGACACTGAAGGATTTGAGGCAGGAAAACTCCGCGATAAGAGCTGTCTATATGGCCCTGTGGCAGAAGCACGGGGGACACGACCCCATGGAACTGTGTCCATTAAACCTCTTTGTCTTCATAAATTACCCAGTCTCGGGTATTTCTTTATTAGCAGCGTGAGAACAGACTAATACAGTAAATTGGTAATGGTATAGAGTGGGGTGCTGCTATAAGGATACCTCAAAATGTGGAAGCAAATTTTGAACTGGGTAACAGGCAAAGGCTGGAACAGTTTGGAGGGCTCAAAAGAAGACAGGAAGACGTGGGAAAGTTTGGAGCTTCCTAGAAAATGGTTGTTGAATGGTTCTGACCAAAAAGTCCAGGCTGAAGGTGGTCTCAGATGGAGATGAGGAACTTTATTGGAACTGGAGCAGAGGTGAGCTGCAGGGGCGGAGCCCTCATGGAGAACCTCTGCTAGAGCAGTGCAGAAGTAAAATGTGGGGTTGGAGCCCCCACACAGACTACTCACTACTCGCCTAGTGCAGCCGTGAGAAAAGGGCCACCCTCCTATAGACCCCAGAATGGTAGATTCACCGACAGCTTGCACCATGTGCCTGGAAAAGTAGCAGACACAACACCAGCCTGTGAAAGCAGCCAGGAGAGGAGCTGTACCCTGCAAAGTCACAGGGGCAGACATGGGTTCCCTGCAAGACCACTGGAACCAACCTCTTGCATAAGTGTGACCTGGATGTGAGACACGGAGTCAAAAGAGATCATTTTGGAGCTTTGACTGCCCTGCTGGATTTCAGACTGGCATGGGGCCTGTGACCTGTTTTGGCCAATTTCTCCCATTTGCAACGGGCGTTATTTATCCAATACCTGTGCCTCCATTGTACCTAGGAAATAACTAACTTGCTTTTTATTTTACAGGCTCATAAACAGAAGAGACTTGCTTGTCTCAGATGAAACTTTGGACTGTGGACTTTTGAGTTAATGCTGAAATAAGACTTTGGGGGACTGTTGGGGAGGCATGATTGGTTTTGAAATGTGAGGACATGAGATTTGGGAGGGACCAGGGGCAAAATGATATGGTTTGGCTGTGTCCCCACCAAATCTCATCTTGAATTGCAGCTCCCATGATCCCCACATGTGGGAGGGACCCGGGGGGAGGTAACTGAATCATGGGGGTGGGATTTTCCCATGCTGTTCTCATGATAGTGAATAAATCTCATGAGATCTTATGGTTTTATAAAGGGCAGTTTCCCTGCACGGGCTCTCTCTTGCCCGCCACCACGTAAGACATGTGTTTGCTCCTCCTTCACCTTCTGCCATGATTGTGAGGTCTCTCTAGCCGTGTGAAACTGTGAGTCCATTAAACTTCTTTTTCTTTAT</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-ZNF83-1]][[Category:NONHSAG026410]][[Category:Transcripts]]

Latest revision as of 05:47, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-ZNF83-1:1

Source

LNCipedia2.1

Same with

NONHSAT067542

Classification

intergenic

Length

2240 nt

Genomic location

chr19-:52892095..52901010

Exon number

5

Exons

52892095..52893679,52898972..52899003,52899569..52899752,52899863..52900005,52900715..52901010

Genome context

Sequence
000001 GGGCCGGGAC AAAGCCTGGG CCGGGCCTGC GCTTCCGTTC GCTTGACTGG CTGCGCTTGT TTTCAGGGTT TTGGTCTGAA 000080
000081 AACGGATCTT ACCTGCGCAG AGCAAAATCG GTTGTAGATT ATATCCACGA AAATTCCTTC TATTAAAATG AATTTCAAGT 000160
000161 CCCACCTACC CTGGAAGCAG AAAGAGAGAG AAGAGAGAGA GTAAAGAGAA AGAGAAAAGA AAGAGAAGTT GAAAAAGAGA 000240
000241 AAGAAAACCA AGAAAGAAAG AGAAAAAAAC CGAAAATAAA TGGACAAGAA AGAAAAAGAT GTAGTCTGGT TTTGTTGCCC 000320
000321 AGGCTGGTCT CCAGCTTCTA GCCTCAAGCA GTCTTCCCAT CTGCTCCTAC CAAAGTGCTC GGATTATAGG CATGAATCAC 000400
000401 CTTGCATGGG AGATAAGGAC CCCCACATCA AGCCCTCAGG TCACTGGGAT CCTGGACTAC GGCACTGCTC CAGGCAGGCC 000480
000481 TGGTTATCCT GCTTGAGGCA GCAATCCTCT TGAGCCTAGT GAAATGCAAC TGGCTGTACC TCAATGATGT TGCCCTGAGA 000560
000561 TTCTGCCAGT CGAGGTATTA CTTCAATCTC CTGAGACCAG CCTCTACCTC CAGATCCAGG GAGGCCAACG TGCCATGCAT 000640
000641 CCCTGGAGCA TGAAACCCCC GATCAAGGAG GAAAAAGGCA GGAGAAAGTC AGGAGAGGGG CAGGGTCTGC AGGATCCCAG 000720
000721 GACCAGGAAG AGTTCACGGC CTCCCTGGGA CTGGGGCTGC GTCGCTGCGC TCCAGGAGCT GACGAGGGAG CGGAGCAGAT 000800
000801 GGGAAGCTCC CAGGGCGGGA ATCAACCTTG CGGTGAGGAC TTTAAAAAAG GTGCGGGCCA GTGCAGGGGA CACTGAAGGA 000880
000881 TTTGAGGCAG GAAAACTCCG CGATAAGAGC TGTCTATATG GCCCTGTGGC AGAAGCACGG GGGACACGAC CCCATGGAAC 000960
000961 TGTGTCCATT AAACCTCTTT GTCTTCATAA ATTACCCAGT CTCGGGTATT TCTTTATTAG CAGCGTGAGA ACAGACTAAT 001040
001041 ACAGTAAATT GGTAATGGTA TAGAGTGGGG TGCTGCTATA AGGATACCTC AAAATGTGGA AGCAAATTTT GAACTGGGTA 001120
001121 ACAGGCAAAG GCTGGAACAG TTTGGAGGGC TCAAAAGAAG ACAGGAAGAC GTGGGAAAGT TTGGAGCTTC CTAGAAAATG 001200
001201 GTTGTTGAAT GGTTCTGACC AAAAAGTCCA GGCTGAAGGT GGTCTCAGAT GGAGATGAGG AACTTTATTG GAACTGGAGC 001280
001281 AGAGGTGAGC TGCAGGGGCG GAGCCCTCAT GGAGAACCTC TGCTAGAGCA GTGCAGAAGT AAAATGTGGG GTTGGAGCCC 001360
001361 CCACACAGAC TACTCACTAC TCGCCTAGTG CAGCCGTGAG AAAAGGGCCA CCCTCCTATA GACCCCAGAA TGGTAGATTC 001440
001441 ACCGACAGCT TGCACCATGT GCCTGGAAAA GTAGCAGACA CAACACCAGC CTGTGAAAGC AGCCAGGAGA GGAGCTGTAC 001520
001521 CCTGCAAAGT CACAGGGGCA GACATGGGTT CCCTGCAAGA CCACTGGAAC CAACCTCTTG CATAAGTGTG ACCTGGATGT 001600
001601 GAGACACGGA GTCAAAAGAG ATCATTTTGG AGCTTTGACT GCCCTGCTGG ATTTCAGACT GGCATGGGGC CTGTGACCTG 001680
001681 TTTTGGCCAA TTTCTCCCAT TTGCAACGGG CGTTATTTAT CCAATACCTG TGCCTCCATT GTACCTAGGA AATAACTAAC 001760
001761 TTGCTTTTTA TTTTACAGGC TCATAAACAG AAGAGACTTG CTTGTCTCAG ATGAAACTTT GGACTGTGGA CTTTTGAGTT 001840
001841 AATGCTGAAA TAAGACTTTG GGGGACTGTT GGGGAGGCAT GATTGGTTTT GAAATGTGAG GACATGAGAT TTGGGAGGGA 001920
001921 CCAGGGGCAA AATGATATGG TTTGGCTGTG TCCCCACCAA ATCTCATCTT GAATTGCAGC TCCCATGATC CCCACATGTG 002000
002001 GGAGGGACCC GGGGGGAGGT AACTGAATCA TGGGGGTGGG ATTTTCCCAT GCTGTTCTCA TGATAGTGAA TAAATCTCAT 002080
002081 GAGATCTTAT GGTTTTATAA AGGGCAGTTT CCCTGCACGG GCTCTCTCTT GCCCGCCACC ACGTAAGACA TGTGTTTGCT 002160
002161 CCTCCTTCAC CTTCTGCCAT GATTGTGAGG TCTCTCTAGC CGTGTGAAAC TGTGAGTCCA TTAAACTTCT TTTTCTTTAT 002240
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