Difference between revisions of "NONHSAT117260"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GGGCCCCACAGTCTTCATTACAACCTCACGGTGCTGTCCCGGGATGGATCTGTGCAGTCAGGGTTTCTTGCTGAGGGACATCTGGATGGTCAGCCCTTCCTGCTCTTCAACAGGCAGAAAGGCAGGGCTGGGTCCTGGGGACAGTGGGCAGAAGCAGTTCTGGGAGCTGAGACCTGGGACACAGAGACTGAGGACTTGACAGAGAATGGGCAGGACCTCAGAAGGGCCCTGGCATATATCAAGGGACAGAAGGGAGCCTTGCATTCCCTCCAGGAGATTAGGGGTTGTGAGATCAGGAAGCCAGCAGCACCAGGGGCTCTAGGCATTCCTACTCTTATGGGTAGCTCTTCCTCTCTCTCAACCTGGAGACTCAGGAATGGACAGTATCCCAGTCCTCCAGAACTCAGACCTTTGCTATGAATATCACAAATTTCTAGAAGGAAGATGCTATGCCGGCCGAGACACACTCTCACCCTATATGGGTAGACTGCAGGCAGAAACTACAGCAGTATCTGGAATCCTGTGTGGGTGTCAGGAACTCCTCCACCATGAGTGTGGCCTGCAGTGAGGCCCTGGAGGGCAACATCACCCTGATATGCTGGGCTCTGGCTTGAATCTCCAGAATATCTCTCTGACCTGGTGACAGGATGGGGCGTCTTTGAGCCAGGATGCCCAGCAGTCTTGGGGTGTTCTGTCCAATGGGATGGGACCTACCACACAGAGGTGGCCTGCAGGATTCCCCAAGGAGAGGAGCAGAGGGTCATCTGCTCCATGGGATACAGCAGGAATCACAGCACTCACCCTGTGTCCTCT</dnaseq>| | sequence = <dnaseq>GGGCCCCACAGTCTTCATTACAACCTCACGGTGCTGTCCCGGGATGGATCTGTGCAGTCAGGGTTTCTTGCTGAGGGACATCTGGATGGTCAGCCCTTCCTGCTCTTCAACAGGCAGAAAGGCAGGGCTGGGTCCTGGGGACAGTGGGCAGAAGCAGTTCTGGGAGCTGAGACCTGGGACACAGAGACTGAGGACTTGACAGAGAATGGGCAGGACCTCAGAAGGGCCCTGGCATATATCAAGGGACAGAAGGGAGCCTTGCATTCCCTCCAGGAGATTAGGGGTTGTGAGATCAGGAAGCCAGCAGCACCAGGGGCTCTAGGCATTCCTACTCTTATGGGTAGCTCTTCCTCTCTCTCAACCTGGAGACTCAGGAATGGACAGTATCCCAGTCCTCCAGAACTCAGACCTTTGCTATGAATATCACAAATTTCTAGAAGGAAGATGCTATGCCGGCCGAGACACACTCTCACCCTATATGGGTAGACTGCAGGCAGAAACTACAGCAGTATCTGGAATCCTGTGTGGGTGTCAGGAACTCCTCCACCATGAGTGTGGCCTGCAGTGAGGCCCTGGAGGGCAACATCACCCTGATATGCTGGGCTCTGGCTTGAATCTCCAGAATATCTCTCTGACCTGGTGACAGGATGGGGCGTCTTTGAGCCAGGATGCCCAGCAGTCTTGGGGTGTTCTGTCCAATGGGATGGGACCTACCACACAGAGGTGGCCTGCAGGATTCCCCAAGGAGAGGAGCAGAGGGTCATCTGCTCCATGGGATACAGCAGGAATCACAGCACTCACCCTGTGTCCTCT</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG046042]][[Category:Transcripts]] |
Latest revision as of 06:16, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT117260 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
813 nt |
| Genomic location |
chr6_mann_hap4-:1237155..1238818 |
| Exon number |
3 |
| Exons |
1237155..1237430,1238042..1238322,1238563..1238818 |
| Genome context |
|
| Sequence |
000001 GGGCCCCACA GTCTTCATTA CAACCTCACG GTGCTGTCCC GGGATGGATC TGTGCAGTCA GGGTTTCTTG CTGAGGGACA 000080
000081 TCTGGATGGT CAGCCCTTCC TGCTCTTCAA CAGGCAGAAA GGCAGGGCTG GGTCCTGGGG ACAGTGGGCA GAAGCAGTTC 000160 000161 TGGGAGCTGA GACCTGGGAC ACAGAGACTG AGGACTTGAC AGAGAATGGG CAGGACCTCA GAAGGGCCCT GGCATATATC 000240 000241 AAGGGACAGA AGGGAGCCTT GCATTCCCTC CAGGAGATTA GGGGTTGTGA GATCAGGAAG CCAGCAGCAC CAGGGGCTCT 000320 000321 AGGCATTCCT ACTCTTATGG GTAGCTCTTC CTCTCTCTCA ACCTGGAGAC TCAGGAATGG ACAGTATCCC AGTCCTCCAG 000400 000401 AACTCAGACC TTTGCTATGA ATATCACAAA TTTCTAGAAG GAAGATGCTA TGCCGGCCGA GACACACTCT CACCCTATAT 000480 000481 GGGTAGACTG CAGGCAGAAA CTACAGCAGT ATCTGGAATC CTGTGTGGGT GTCAGGAACT CCTCCACCAT GAGTGTGGCC 000560 000561 TGCAGTGAGG CCCTGGAGGG CAACATCACC CTGATATGCT GGGCTCTGGC TTGAATCTCC AGAATATCTC TCTGACCTGG 000640 000641 TGACAGGATG GGGCGTCTTT GAGCCAGGAT GCCCAGCAGT CTTGGGGTGT TCTGTCCAAT GGGATGGGAC CTACCACACA 000720 000721 GAGGTGGCCT GCAGGATTCC CCAAGGAGAG GAGCAGAGGG TCATCTGCTC CATGGGATAC AGCAGGAATC ACAGCACTCA 000800 000801 CCCTGTGTCC TCT |
Predicted Small Protein
| Name | NONHSAT117260_smProtein_449:613 |
| Length | 55 |
| Molecular weight | 5978.8132 |
| Aromaticity | 0.0555555555556 |
| Instability index | 67.3259259259 |
| Isoelectric point | 5.41021728516 |
| Runs | 8 |
| Runs residual | 0.0145438121048 |
| Runs probability | 0.0411477654125 |
| Amino acid sequence | MPAETHSHPIWVDCRQKLQQYLESCVGVRNSSTMSVACSEALEGNITLICWALA |
| Secondary structure | LLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHLLEEHHHHHHL |
| PRMN | - |
| PiMo | - |
