Difference between revisions of "NONHSAT118459"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGATGATGGAGACAGAGCGACTTGTGCTACCCCCTCCAGATCCCCTGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAGTAGCGTGAGTGACTTTTGACCCTAACCTTTGACCCGCATTGAGTCCAAACCTCCTTCACCCTCCTCACAGTAGGATCTAGCTTAACCTTGTTCATCTGTGCCTGTACTCCTGTCCATCCCAGCCTGAAGGGGTGCTGGACAGATTACAGCCCAGTGTACCTGCAGTACGTGTGAGGACAGAGCAGAAAGGGCTGGGGATATTTTTGCTTTGAGAGCTGCTCTTTCAAATGTGGCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTTTGAGCCTCCAACCTTTCATCCTTAGGTCTGGGACCCCTTTTTCTAAAATcagtgagtctccaatttcagtgtgcttcatgattagccagggagctttttaaaaatgcacattcctaggtccagcctccatgtttctgaAATCCAAAATCTGCCCCAGGTAATTCAGTAGCAGGTAGTTTTTGGCCAAGCCTGATTGTCCTAGTCTGTTTGACACATCTGCCATTTCTGATCTGAACACAAGTCCCATCATCTCTTTTGTCTG</dnaseq>| | sequence = <dnaseq>GGATGATGGAGACAGAGCGACTTGTGCTACCCCCTCCAGATCCCCTGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAGTAGCGTGAGTGACTTTTGACCCTAACCTTTGACCCGCATTGAGTCCAAACCTCCTTCACCCTCCTCACAGTAGGATCTAGCTTAACCTTGTTCATCTGTGCCTGTACTCCTGTCCATCCCAGCCTGAAGGGGTGCTGGACAGATTACAGCCCAGTGTACCTGCAGTACGTGTGAGGACAGAGCAGAAAGGGCTGGGGATATTTTTGCTTTGAGAGCTGCTCTTTCAAATGTGGCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTTTGAGCCTCCAACCTTTCATCCTTAGGTCTGGGACCCCTTTTTCTAAAATcagtgagtctccaatttcagtgtgcttcatgattagccagggagctttttaaaaatgcacattcctaggtccagcctccatgtttctgaAATCCAAAATCTGCCCCAGGTAATTCAGTAGCAGGTAGTTTTTGGCCAAGCCTGATTGTCCTAGTCTGTTTGACACATCTGCCATTTCTGATCTGAACACAAGTCCCATCATCTCTTTTGTCTG</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG046653]][[Category:Transcripts]] |
Latest revision as of 06:24, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT118459 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
686 nt |
| Genomic location |
chr6_ssto_hap7+:3259678..3260445 |
| Exon number |
2 |
| Exons |
3259678..3259701,3259784..3260445 |
| Genome context |
|
| Sequence |
000001 GGATGATGGA GACAGAGCGA CTTGTGCTAC CCCCTCCAGA TCCCCTGGAC CTACCCCTTC GGGCCGTGGA GCTCGGATGC 000080
000081 ACGGGGCACT GGGAGCTGCT GAACTTGCCT GGAGCTCCAG AGAGTAGCGT GAGTGACTTT TGACCCTAAC CTTTGACCCG 000160 000161 CATTGAGTCC AAACCTCCTT CACCCTCCTC ACAGTAGGAT CTAGCTTAAC CTTGTTCATC TGTGCCTGTA CTCCTGTCCA 000240 000241 TCCCAGCCTG AAGGGGTGCT GGACAGATTA CAGCCCAGTG TACCTGCAGT ACGTGTGAGG ACAGAGCAGA AAGGGCTGGG 000320 000321 GATATTTTTG CTTTGAGAGC TGCTCTTTCA AATGTGGCAT TTCTCCGTGG AGCTCCCTTC TGTATCCAAG CACCAGGGCA 000400 000401 CTTGGTGACT GAGATGATAG GCTTTGAGCC TCCAACCTTT CATCCTTAGG TCTGGGACCC CTTTTTCTAA AATcagtgag 000480 000481 tctccaattt cagtgtgctt catgattagc cagggagctt tttaaaaatg cacattccta ggtccagcct ccatgtttct 000560 000561 gaAATCCAAA ATCTGCCCCA GGTAATTCAG TAGCAGGTAG TTTTTGGCCA AGCCTGATTG TCCTAGTCTG TTTGACACAT 000640 000641 CTGCCATTTC TGATCTGAAC ACAAGTCCCA TCATCTCTTT TGTCTG |
Predicted Small Protein
| Name | NONHSAT118459_smProtein_2:142 |
| Length | 47 |
| Molecular weight | 5043.7466 |
| Aromaticity | 0.0434782608696 |
| Instability index | 54.2956521739 |
| Isoelectric point | 4.11639404297 |
| Runs | 7 |
| Runs residual | 0.00918737060041 |
| Runs probability | 0.0365785954022 |
| Amino acid sequence | MMETERLVLPPPDPLDLPLRAVELGCTGHWELLNLPGAPESSVSDF |
| Secondary structure | LLLLEEELLLLLLLLLLLHHHHLLLLLLHHHHLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
