Difference between revisions of "NONHSAT121411"
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sequence = <dnaseq>ATCGTGACCCAGTAGGACAGCTCTGTGGCCTAAGGCTAGATTGGCACAATGATGGAATGGTTTTCAAGAGGCCAAGTAGGACCAGCTGTGGGTTTATCCCATTTTACCTAAGGATTTTACACAATACATTGAGTGCAGGAATGGCACGCAATGATTGCACTCAGTAATATACCAAACCACTCCTGGCTTTGTTTAGACCCTAGACTTGGGCCCTCATCCTTCTCGTAGACCTCTTGCGAGGATTTTCCCCTTTTACAGATTCACACTCAGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAACGTCCAGTGACTCACAGTTAAGAGAGCTTCAGCAGCAGCTCTGACCAAAGTGATGACCAACTACTTAACATGAATTAGAAACAGAGCAGAAAAAACACGCCTTTAGCCTGCTCTGCGTAAAGAACCAAGTCTCCACCATGAACACCAAGC</dnaseq>| | sequence = <dnaseq>ATCGTGACCCAGTAGGACAGCTCTGTGGCCTAAGGCTAGATTGGCACAATGATGGAATGGTTTTCAAGAGGCCAAGTAGGACCAGCTGTGGGTTTATCCCATTTTACCTAAGGATTTTACACAATACATTGAGTGCAGGAATGGCACGCAATGATTGCACTCAGTAATATACCAAACCACTCCTGGCTTTGTTTAGACCCTAGACTTGGGCCCTCATCCTTCTCGTAGACCTCTTGCGAGGATTTTCCCCTTTTACAGATTCACACTCAGTCCCGAACAGAAACACTTGAGCACCTACAATCTCACAGCCAACTCCCTGCCAACGTCCAGTGACTCACAGTTAAGAGAGCTTCAGCAGCAGCTCTGACCAAAGTGATGACCAACTACTTAACATGAATTAGAAACAGAGCAGAAAAAACACGCCTTTAGCCTGCTCTGCGTAAAGAACCAAGTCTCCACCATGAACACCAAGC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:NONHSAG047936]] | + | [[Category:Antisense]][[Category:NONHSAG047936]][[Category:Transcripts]] |
Latest revision as of 06:37, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT121411 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
473 nt |
| Genomic location |
chr7+:73093483..73095695 |
| Exon number |
2 |
| Exons |
73093483..73093516,73095257..73095695 |
| Genome context |
|
| Sequence |
000001 ATCGTGACCC AGTAGGACAG CTCTGTGGCC TAAGGCTAGA TTGGCACAAT GATGGAATGG TTTTCAAGAG GCCAAGTAGG 000080
000081 ACCAGCTGTG GGTTTATCCC ATTTTACCTA AGGATTTTAC ACAATACATT GAGTGCAGGA ATGGCACGCA ATGATTGCAC 000160 000161 TCAGTAATAT ACCAAACCAC TCCTGGCTTT GTTTAGACCC TAGACTTGGG CCCTCATCCT TCTCGTAGAC CTCTTGCGAG 000240 000241 GATTTTCCCC TTTTACAGAT TCACACTCAG TCCCGAACAG AAACACTTGA GCACCTACAA TCTCACAGCC AACTCCCTGC 000320 000321 CAACGTCCAG TGACTCACAG TTAAGAGAGC TTCAGCAGCA GCTCTGACCA AAGTGATGAC CAACTACTTA ACATGAATTA 000400 000401 GAAACAGAGC AGAAAAAACA CGCCTTTAGC CTGCTCTGCG TAAAGAACCA AGTCTCCACC ATGAACACCA AGC |
Predicted Small Protein
| Name | NONHSAT121411_smProtein_56:166 |
| Length | 37 |
| Molecular weight | 4132.8153 |
| Aromaticity | 0.111111111111 |
| Instability index | 82.0502777778 |
| Isoelectric point | 10.0896606445 |
| Runs | 5 |
| Runs residual | 0.0415695415695 |
| Runs probability | 0.0342165695107 |
| Amino acid sequence | MVFKRPSRTSCGFIPFYLRILHNTLSAGMARNDCTQ |
| Secondary structure | LEEELLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
