Difference between revisions of "NONHSAT124871"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AATTATAAGAGAAAGCCATAATGTGGCAAGACTTGTAGTTCTGTGGCATGGGGCAGTACTTGAAGGGTAAATTCAGTGTGTCTACAAAATAAAGTGTGTTCTTAAGTGGTTTGCTGTGCTCACACAAAGTAAATGCATTATACTGTAGTTGCTGACATATAATGTGCATCTTTTTAAAAGCCAGCAACATGGCCATAGAGACGACTTCATCTTGCCTAATGAAAAGAATCAAGAAACACTTCAAAGGAGTCACTGGGATGCACATAAAATACCCACACTCTTAGGCAGTGCTCTACCAGTGACTGTTAAGTATATGATATCCTCAGTCAAGCTACGGTAAGCTCATTCATTTTCATAAAGAATTCTTGCTTGAACTTCCAAACTGTACCCTGCAATGCAGTGTAATTTGTGTAGACACAGCATTCTGCTTCTAGCTACTTATCAGTCCATTTTTATGACACTTTTAACTGCAGGGCGTGGGCTCCCTGATACAGACCAGACCTTGAAGAACAGCAATTCCTCGTCAGAGTTTTAGTCCAGCGGCACCATTCCGTACAAGAGCAGTTATATTTTAGGAAACTGGGACAAGAGGTCAAGGCTGGGAGTGCTTCGGGGTGAGTAAAGTAAGGTAGTTTGGAATTAGGCAAAATGGCAGGATTAG</dnaseq>| | sequence = <dnaseq>AATTATAAGAGAAAGCCATAATGTGGCAAGACTTGTAGTTCTGTGGCATGGGGCAGTACTTGAAGGGTAAATTCAGTGTGTCTACAAAATAAAGTGTGTTCTTAAGTGGTTTGCTGTGCTCACACAAAGTAAATGCATTATACTGTAGTTGCTGACATATAATGTGCATCTTTTTAAAAGCCAGCAACATGGCCATAGAGACGACTTCATCTTGCCTAATGAAAAGAATCAAGAAACACTTCAAAGGAGTCACTGGGATGCACATAAAATACCCACACTCTTAGGCAGTGCTCTACCAGTGACTGTTAAGTATATGATATCCTCAGTCAAGCTACGGTAAGCTCATTCATTTTCATAAAGAATTCTTGCTTGAACTTCCAAACTGTACCCTGCAATGCAGTGTAATTTGTGTAGACACAGCATTCTGCTTCTAGCTACTTATCAGTCCATTTTTATGACACTTTTAACTGCAGGGCGTGGGCTCCCTGATACAGACCAGACCTTGAAGAACAGCAATTCCTCGTCAGAGTTTTAGTCCAGCGGCACCATTCCGTACAAGAGCAGTTATATTTTAGGAAACTGGGACAAGAGGTCAAGGCTGGGAGTGCTTCGGGGTGAGTAAAGTAAGGTAGTTTGGAATTAGGCAAAATGGCAGGATTAG</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG049466]][[Category:Transcripts]] |
Latest revision as of 06:52, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT124871 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
661 nt |
| Genomic location |
chr8+:8246546..8247206 |
| Exon number |
1 |
| Exons |
8246546..8247206 |
| Genome context |
|
| Sequence |
000001 AATTATAAGA GAAAGCCATA ATGTGGCAAG ACTTGTAGTT CTGTGGCATG GGGCAGTACT TGAAGGGTAA ATTCAGTGTG 000080
000081 TCTACAAAAT AAAGTGTGTT CTTAAGTGGT TTGCTGTGCT CACACAAAGT AAATGCATTA TACTGTAGTT GCTGACATAT 000160 000161 AATGTGCATC TTTTTAAAAG CCAGCAACAT GGCCATAGAG ACGACTTCAT CTTGCCTAAT GAAAAGAATC AAGAAACACT 000240 000241 TCAAAGGAGT CACTGGGATG CACATAAAAT ACCCACACTC TTAGGCAGTG CTCTACCAGT GACTGTTAAG TATATGATAT 000320 000321 CCTCAGTCAA GCTACGGTAA GCTCATTCAT TTTCATAAAG AATTCTTGCT TGAACTTCCA AACTGTACCC TGCAATGCAG 000400 000401 TGTAATTTGT GTAGACACAG CATTCTGCTT CTAGCTACTT ATCAGTCCAT TTTTATGACA CTTTTAACTG CAGGGCGTGG 000480 000481 GCTCCCTGAT ACAGACCAGA CCTTGAAGAA CAGCAATTCC TCGTCAGAGT TTTAGTCCAG CGGCACCATT CCGTACAAGA 000560 000561 GCAGTTATAT TTTAGGAAAC TGGGACAAGA GGTCAAGGCT GGGAGTGCTT CGGGGTGAGT AAAGTAAGGT AGTTTGGAAT 000640 000641 TAGGCAAAAT GGCAGGATTA G |
Predicted Small Protein
| Name | NONHSAT124871_smProtein_161:283 |
| Length | 41 |
| Molecular weight | 4569.531 |
| Aromaticity | 0.075 |
| Instability index | 59.055 |
| Isoelectric point | 9.92657470703 |
| Runs | 9 |
| Runs residual | 0.0469758064516 |
| Runs probability | 0.0378613908027 |
| Amino acid sequence | MCIFLKASNMAIETTSSCLMKRIKKHFKGVTGMHIKYPHS |
| Secondary structure | LEEEEELLLHHHHLLHHHHHHHHHHHHHLLLLLEEELLLL |
| PRMN | - |
| PiMo | - |
