Difference between revisions of "NONHSAT125670"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GTCCCTGCAGCCCTGTGAACAACTTTGACAACCTCCTGCACCAAATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCACAGAGAGCCTGGTGGGTTCCTTCCACACCACACTCTCTACCCCACCACACTGGCTGCCACATTAACAGacatggtcttgctgtgtcacccaggctggagtgaagtggcacaatcatggctcactgcagcctagaaccctgggttcaagtgatcctctcttctcagcctcctgagtagttggaactacagacatgcaccaccgtgcccagcCAATCTTCAGGCATTCCTACCACTCTTGTTGAGAGAGAGGGCTCAGAACAAATGCCAACTGcctctttccactaccttcttccccacctttctcacagtccctcagggaagacagggaagtctttcctcttccttgttctggctaaaggggacactcctcctcctttccagagtggcatccaccttcTATGGAATAGCAAAGCCAAGTGGACAGCagagagagagagaggcagagagagagagagaggcagagagagagagagGTTTACTAAGAAAAGAATAAAGATGAGGaatattttaaaatattataatCCTTATACATATTTAAAACTATCTTTTCCACTTGGTTATTTGCATTTTGTTGTTTTATGGTTTTTGCAAATGTTTAGACATTTAAAATATTTATATAGTCAAATATTTTCATGTTTTTTCATTGAATGTGCCTTCTCAGGGATGCTCAGAGAGACCTTCCACAATGTAAGTCTGTTTCCTCCTCATTCTTTTAGAGCATCAtttg</dnaseq>| | sequence = <dnaseq>GTCCCTGCAGCCCTGTGAACAACTTTGACAACCTCCTGCACCAAATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCACAGAGAGCCTGGTGGGTTCCTTCCACACCACACTCTCTACCCCACCACACTGGCTGCCACATTAACAGacatggtcttgctgtgtcacccaggctggagtgaagtggcacaatcatggctcactgcagcctagaaccctgggttcaagtgatcctctcttctcagcctcctgagtagttggaactacagacatgcaccaccgtgcccagcCAATCTTCAGGCATTCCTACCACTCTTGTTGAGAGAGAGGGCTCAGAACAAATGCCAACTGcctctttccactaccttcttccccacctttctcacagtccctcagggaagacagggaagtctttcctcttccttgttctggctaaaggggacactcctcctcctttccagagtggcatccaccttcTATGGAATAGCAAAGCCAAGTGGACAGCagagagagagagaggcagagagagagagagaggcagagagagagagagGTTTACTAAGAAAAGAATAAAGATGAGGaatattttaaaatattataatCCTTATACATATTTAAAACTATCTTTTCCACTTGGTTATTTGCATTTTGTTGTTTTATGGTTTTTGCAAATGTTTAGACATTTAAAATATTTATATAGTCAAATATTTTCATGTTTTTTCATTGAATGTGCCTTCTCAGGGATGCTCAGAGAGACCTTCCACAATGTAAGTCTGTTTCCTCCTCATTCTTTTAGAGCATCAtttg</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intronic(S)]] | + | [[Category:Intronic(S)]][[Category:NONHSAG049817]][[Category:Transcripts]] |
Latest revision as of 06:55, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT125670 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intronic(S) |
| Length |
806 nt |
| Genomic location |
chr8-:26711247..26712168 |
| Exon number |
2 |
| Exons |
26711247..26711905,26712022..26712168 |
| Genome context |
|
| Sequence |
000001 GTCCCTGCAG CCCTGTGAAC AACTTTGACA ACCTCCTGCA CCAAATTCTC AACAATGTTT CCATCCCAGT CTCAGGGCAC 000080
000081 AGAGAGCCTG GTGGGTTCCT TCCACACCAC ACTCTCTACC CCACCACACT GGCTGCCACA TTAACAGaca tggtcttgct 000160 000161 gtgtcaccca ggctggagtg aagtggcaca atcatggctc actgcagcct agaaccctgg gttcaagtga tcctctcttc 000240 000241 tcagcctcct gagtagttgg aactacagac atgcaccacc gtgcccagcC AATCTTCAGG CATTCCTACC ACTCTTGTTG 000320 000321 AGAGAGAGGG CTCAGAACAA ATGCCAACTG cctctttcca ctaccttctt ccccaccttt ctcacagtcc ctcagggaag 000400 000401 acagggaagt ctttcctctt ccttgttctg gctaaagggg acactcctcc tcctttccag agtggcatcc accttcTATG 000480 000481 GAATAGCAAA GCCAAGTGGA CAGCagagag agagagaggc agagagagag agagaggcag agagagagag agGTTTACTA 000560 000561 AGAAAAGAAT AAAGATGAGG aatattttaa aatattataa tCCTTATACA TATTTAAAAC TATCTTTTCC ACTTGGTTAT 000640 000641 TTGCATTTTG TTGTTTTATG GTTTTTGCAA ATGTTTAGAC ATTTAAAATA TTTATATAGT CAAATATTTT CATGTTTTTT 000720 000721 CATTGAATGT GCCTTCTCAG GGATGCTCAG AGAGACCTTC CACAATGTAA GTCTGTTTCC TCCTCATTCT TTTAGAGCAT 000800 000801 CAtttg |
Predicted Small Protein
| Name | NONHSAT125670_smProtein_149:211 |
| Length | 21 |
| Molecular weight | 2199.55 |
| Aromaticity | 0.1 |
| Instability index | 68.3 |
| Isoelectric point | 5.22235107422 |
| Runs | 5 |
| Runs residual | 0.01 |
| Runs probability | 0.0155272919979 |
| Amino acid sequence | MVLLCHPGWSEVAQSWLTAA |
| Secondary structure | LEEEELLLHHHHHHHHHHLL |
| PRMN | - |
| PiMo | - |
