Difference between revisions of "NONHSAT129966"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>ATGCAGATTTTTGTTAAAACCCTCACAGAGAAGACCATCACTTTGGAGACTGAACTCTTGCATACAGTAGGCCAAGATTCAGGATAAGGAAGAAATGCCTCCTGACTAGCAAAAATTGACCTTCACTGGCAAACAACTAGAAGATGGACATCCTCCGTCTGACCACAAAATTCAAAAGGGGTACACTCTCTATCTTATTTTGAAGTTTTGTGGTGGTGCTAAAGAAGAAGTTTTATACAAGTCTCAAGAAGAATAAGCATAAGAGAAAGAGGGTGACACTGGCTATCTTGAAATACTATATAGTGAATGAGAATGACAAAAACTAGTCACCTTCATTGGAAGTGTCCTTCAGATGAATGTGGTGCTAGAGTTTTTAATGGCCAGCCACTTTGACAGATATTACTGTGGCAAATGTTTTCTGACCTACTATTTCAACAAACCAGAATGCAAGTAA</dnaseq>| | sequence = <dnaseq>ATGCAGATTTTTGTTAAAACCCTCACAGAGAAGACCATCACTTTGGAGACTGAACTCTTGCATACAGTAGGCCAAGATTCAGGATAAGGAAGAAATGCCTCCTGACTAGCAAAAATTGACCTTCACTGGCAAACAACTAGAAGATGGACATCCTCCGTCTGACCACAAAATTCAAAAGGGGTACACTCTCTATCTTATTTTGAAGTTTTGTGGTGGTGCTAAAGAAGAAGTTTTATACAAGTCTCAAGAAGAATAAGCATAAGAGAAAGAGGGTGACACTGGCTATCTTGAAATACTATATAGTGAATGAGAATGACAAAAACTAGTCACCTTCATTGGAAGTGTCCTTCAGATGAATGTGGTGCTAGAGTTTTTAATGGCCAGCCACTTTGACAGATATTACTGTGGCAAATGTTTTCTGACCTACTATTTCAACAAACCAGAATGCAAGTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG051628]][[Category:Transcripts]] |
Latest revision as of 07:11, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT129966 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
454 nt |
| Genomic location |
chr9-:1164414..1164867 |
| Exon number |
1 |
| Exons |
1164414..1164867 |
| Genome context |
|
| Sequence |
000001 ATGCAGATTT TTGTTAAAAC CCTCACAGAG AAGACCATCA CTTTGGAGAC TGAACTCTTG CATACAGTAG GCCAAGATTC 000080
000081 AGGATAAGGA AGAAATGCCT CCTGACTAGC AAAAATTGAC CTTCACTGGC AAACAACTAG AAGATGGACA TCCTCCGTCT 000160 000161 GACCACAAAA TTCAAAAGGG GTACACTCTC TATCTTATTT TGAAGTTTTG TGGTGGTGCT AAAGAAGAAG TTTTATACAA 000240 000241 GTCTCAAGAA GAATAAGCAT AAGAGAAAGA GGGTGACACT GGCTATCTTG AAATACTATA TAGTGAATGA GAATGACAAA 000320 000321 AACTAGTCAC CTTCATTGGA AGTGTCCTTC AGATGAATGT GGTGCTAGAG TTTTTAATGG CCAGCCACTT TGACAGATAT 000400 000401 TACTGTGGCA AATGTTTTCT GACCTACTAT TTCAACAAAC CAGAATGCAA GTAA |
Predicted Small Protein
| Name | NONHSAT129966_smProtein_143:202 |
| Length | 20 |
| Molecular weight | 2253.7482 |
| Aromaticity | 0.105263157895 |
| Instability index | 40.1947368421 |
| Isoelectric point | 11.0001831055 |
| Runs | 5 |
| Runs residual | 0.0123839009288 |
| Runs probability | 0.0336866278042 |
| Amino acid sequence | MDILRLTTKFKRGTLSILF |
| Secondary structure | LLHHHHHHHHHLLLEEELL |
| PRMN | - |
| PiMo | - |
