Difference between revisions of "LINC00160"
Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC00160 ===Approved Name=== long intergenic non-protein coding RNA 160 ===Previous Symbols=== C21orf52, NCRNA00160 ===Synonym...") |
Chunlei Yu (talk | contribs) |
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===Previous Symbols=== | ===Previous Symbols=== | ||
C21orf52, NCRNA00160 | C21orf52, NCRNA00160 | ||
| − | |||
| − | |||
===Chromosome=== | ===Chromosome=== | ||
21q22.12 | 21q22.12 | ||
===RefSeq ID=== | ===RefSeq ID=== | ||
NR_024351 | NR_024351 | ||
| − | |||
| − | |||
===Ensembl ID=== | ===Ensembl ID=== | ||
ENSG00000230978 | ENSG00000230978 | ||
| − | === | + | ===Disease=== |
| − | + | * breast cancer<ref name="ref1" /> | |
| + | ===labs working on this lncRNA=== | ||
| + | * Center for Nuclear Receptors and Cell Signaling (P.J., F.M., C.W.), Department of Biology and Biochemistry, and Department of Biology and Biochemistry (P.H.G.), University of Houston, Houston, Texas 77204. <ref name="ref1" /> | ||
| + | ===References=== | ||
| + | <references> | ||
| + | <ref name="ref1">Jonsson P, Coarfa C, Mesmar F, Raz T, Rajapakshe K, Thompson JF, et al. Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer[J]. Molecular endocrinology. 2015,29(11):1634-45.</ref>(1) | ||
| + | </references> | ||
===Sequence=== | ===Sequence=== | ||
>gi|392050767|ref|NR_024351.2| Homo sapiens long intergenic non-protein coding RNA 160 (LINC00160), long non-coding RNA | >gi|392050767|ref|NR_024351.2| Homo sapiens long intergenic non-protein coding RNA 160 (LINC00160), long non-coding RNA | ||
<dnaseq>GAATGAGGAAGCTCTCTGTGTACTGATGGGGACAGAAGTTCCAGGACATTTTGTAAGGTGGCTGAAAAACAAGACAGATGCTTCCAGAATCAATCACCGAATGGTGGATCTACAGCCAACCACCCATTCTCTTCAGTCACTGAGATGATATGATGCTGCTGGTCCAAGGACTACATTTCGAGAACCCCAACCACGCATGGATTGTTGTCAACTATGAATCACAAGATTTCCAGGGTTTTGTCTGCTGCCTTCCCTGCAAGCCCTGCCATCCACTGAGACCCAACCTCAGCCATTCTTGGCACATCAGCCCATGAGAAGTCTGCCACTCTTTCTTCCTAAGCAAAGCAGCATCCTTCAGGGCCTGGAGCTCCTGGACACAAAAGCCATTTTTGGGAGAAAAATGTGGATAAAGTCACTCCTGGGCCACCTGTCTGTGAGGCTGTATGGAAGCTGCCTACTGGTTTGAGGAGAGGCTGCTGGGTTCTTTCCTTTACTAAGGATTTGCTTAAGTCAGCCCTCCAGGATCCAAAAAAGAGCCAGAAAAAAGCCAGCAAAACAGCTGAGGCACAGACTAGATGGTAGTCCAAGGACCAAGACCTGGCCAGCCAGAGGGACCAGGTGTCCAGACCCCGGACTGTTTTCAATACAGTTATACAATGAAATCAAATAAATGGATGTATTGATTGCTTGGCAA</dnaseq> | <dnaseq>GAATGAGGAAGCTCTCTGTGTACTGATGGGGACAGAAGTTCCAGGACATTTTGTAAGGTGGCTGAAAAACAAGACAGATGCTTCCAGAATCAATCACCGAATGGTGGATCTACAGCCAACCACCCATTCTCTTCAGTCACTGAGATGATATGATGCTGCTGGTCCAAGGACTACATTTCGAGAACCCCAACCACGCATGGATTGTTGTCAACTATGAATCACAAGATTTCCAGGGTTTTGTCTGCTGCCTTCCCTGCAAGCCCTGCCATCCACTGAGACCCAACCTCAGCCATTCTTGGCACATCAGCCCATGAGAAGTCTGCCACTCTTTCTTCCTAAGCAAAGCAGCATCCTTCAGGGCCTGGAGCTCCTGGACACAAAAGCCATTTTTGGGAGAAAAATGTGGATAAAGTCACTCCTGGGCCACCTGTCTGTGAGGCTGTATGGAAGCTGCCTACTGGTTTGAGGAGAGGCTGCTGGGTTCTTTCCTTTACTAAGGATTTGCTTAAGTCAGCCCTCCAGGATCCAAAAAAGAGCCAGAAAAAAGCCAGCAAAACAGCTGAGGCACAGACTAGATGGTAGTCCAAGGACCAAGACCTGGCCAGCCAGAGGGACCAGGTGTCCAGACCCCGGACTGTTTTCAATACAGTTATACAATGAAATCAAATAAATGGATGTATTGATTGCTTGGCAA</dnaseq> | ||
Latest revision as of 15:07, 1 July 2016
Contents
Annotated Information
Approved Symbol
LINC00160
Approved Name
long intergenic non-protein coding RNA 160
Previous Symbols
C21orf52, NCRNA00160
Chromosome
21q22.12
RefSeq ID
NR_024351
Ensembl ID
ENSG00000230978
Disease
- breast cancer[1]
labs working on this lncRNA
- Center for Nuclear Receptors and Cell Signaling (P.J., F.M., C.W.), Department of Biology and Biochemistry, and Department of Biology and Biochemistry (P.H.G.), University of Houston, Houston, Texas 77204. [1]
References
Sequence
>gi|392050767|ref|NR_024351.2| Homo sapiens long intergenic non-protein coding RNA 160 (LINC00160), long non-coding RNA
000001 GAATGAGGAA GCTCTCTGTG TACTGATGGG GACAGAAGTT CCAGGACATT TTGTAAGGTG GCTGAAAAAC AAGACAGATG 000080
000081 CTTCCAGAAT CAATCACCGA ATGGTGGATC TACAGCCAAC CACCCATTCT CTTCAGTCAC TGAGATGATA TGATGCTGCT 000160
000161 GGTCCAAGGA CTACATTTCG AGAACCCCAA CCACGCATGG ATTGTTGTCA ACTATGAATC ACAAGATTTC CAGGGTTTTG 000240
000241 TCTGCTGCCT TCCCTGCAAG CCCTGCCATC CACTGAGACC CAACCTCAGC CATTCTTGGC ACATCAGCCC ATGAGAAGTC 000320
000321 TGCCACTCTT TCTTCCTAAG CAAAGCAGCA TCCTTCAGGG CCTGGAGCTC CTGGACACAA AAGCCATTTT TGGGAGAAAA 000400
000401 ATGTGGATAA AGTCACTCCT GGGCCACCTG TCTGTGAGGC TGTATGGAAG CTGCCTACTG GTTTGAGGAG AGGCTGCTGG 000480
000481 GTTCTTTCCT TTACTAAGGA TTTGCTTAAG TCAGCCCTCC AGGATCCAAA AAAGAGCCAG AAAAAAGCCA GCAAAACAGC 000560
000561 TGAGGCACAG ACTAGATGGT AGTCCAAGGA CCAAGACCTG GCCAGCCAGA GGGACCAGGT GTCCAGACCC CGGACTGTTT 000640
000641 TCAATACAGT TATACAATGA AATCAAATAA ATGGATGTAT TGATTGCTTG GCAA
000081 CTTCCAGAAT CAATCACCGA ATGGTGGATC TACAGCCAAC CACCCATTCT CTTCAGTCAC TGAGATGATA TGATGCTGCT 000160
000161 GGTCCAAGGA CTACATTTCG AGAACCCCAA CCACGCATGG ATTGTTGTCA ACTATGAATC ACAAGATTTC CAGGGTTTTG 000240
000241 TCTGCTGCCT TCCCTGCAAG CCCTGCCATC CACTGAGACC CAACCTCAGC CATTCTTGGC ACATCAGCCC ATGAGAAGTC 000320
000321 TGCCACTCTT TCTTCCTAAG CAAAGCAGCA TCCTTCAGGG CCTGGAGCTC CTGGACACAA AAGCCATTTT TGGGAGAAAA 000400
000401 ATGTGGATAA AGTCACTCCT GGGCCACCTG TCTGTGAGGC TGTATGGAAG CTGCCTACTG GTTTGAGGAG AGGCTGCTGG 000480
000481 GTTCTTTCCT TTACTAAGGA TTTGCTTAAG TCAGCCCTCC AGGATCCAAA AAAGAGCCAG AAAAAAGCCA GCAAAACAGC 000560
000561 TGAGGCACAG ACTAGATGGT AGTCCAAGGA CCAAGACCTG GCCAGCCAGA GGGACCAGGT GTCCAGACCC CGGACTGTTT 000640
000641 TCAATACAGT TATACAATGA AATCAAATAA ATGGATGTAT TGATTGCTTG GCAA
