Difference between revisions of "LINC00862"
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | LINC00862 | + | LINC00862:long intergenic non-protein coding RNA 862 |
| − | + | ||
| − | long intergenic non-protein coding RNA 862 | + | ===Characteristics=== |
| − | === | + | genomic location: 1q32.1 |
| − | + | ||
| − | === | + | ===Function=== |
| − | + | LINC00862 couble be a potential signature for Cystic Fibrosis (CF) as it is differentially expressed between CF and non-CF cells <ref name="ref1" />. | |
| − | === | + | |
| − | + | ===Regulation=== | |
| − | === | + | |
| − | + | ===Diseases=== | |
| − | === | + | Cystic Fibrosis <ref name="ref1" /> |
| − | + | ||
| − | === | + | ===Expression=== |
| − | + | LINC00862 is differentially expressed between Cystic Fibrosis (CF) and non-CF cells <ref name="ref1" />. | |
| − | == | + | |
| − | + | ===Sequence=== | |
| + | >NR_040064.1 Homo sapiens long intergenic non-protein coding RNA 862 (LINC00862), long non-coding RNA | ||
| + | <dnaseq>TGATGAATTTGTGTGTGTTGTGGCTGATGTGCATTTTGGTGCTTTGTATGCAAGTTTAAGAATATCTTAG | ||
| + | CAATAGGAAAGGAAGATTTATGGCAGTTTAATTAATGAATATAATGAAGGCTAAAACTTGTAGATAAATT | ||
| + | TATAAGGTGCTTAAGAGCTCTTCAATTTGTTAATGGAAAGAAACACCATTTACACCGGATGGCTACAAAG | ||
| + | CAACCTTATTCTGAGAGAGAGGATCTCATTCTGTCACCCAGGCTGGAGTGCATGATCATAGCTCACTGCA | ||
| + | GCCTCGACCTCCTGGGCTCAAGTGATCCTCCTGCTCCAGCCTCTCAAGTAGCTAGGACTACAGATCTTTT | ||
| + | CTCAGAATAGCAGTCTGTAGGCTGTCACCTAAAGTGTCCTGTTTTCAGTGCTGCACCTGCTCTGAGCTTC | ||
| + | ATCTTTTTACGAAGACGTCATGGTGTGCTATCTGTACTGGGAAACTTTCCCCAGCATCAGCCATCTCCTG | ||
| + | AAGATAACATTGTCTGCTAGAGATTGTCATGTATGTGGATTGAATCTCTTTATCTTCATGGATCCAGTTG | ||
| + | AAAATCAGGCATTGCATCCAGTTATCATGGCTTTAATCTTAATGCCTTCCCTGCACTGTTTTGGGAATAT | ||
| + | CTTAATACTGCTATTTTTGAAGAGTCCAGCTCAGTTATTCTGCAGAATGTCTGTTGATTTGGCTTTGCTG | ||
| + | TTTCCTCATAAGTAGATCCAGATTATACGTTTTTGTTGATGTTGGGTTCTTCTCAGTGAATCACATCCGA | ||
| + | TGATGTCAGCACGAGGCCTGATCATTTGGTTTAGGTAGCTTTCACTAGACTTTTTCATTGTAAAGGTACC | ||
| + | TATCCCTTTTCTAATTAATAAGTAATATGTTGGGTGATAGTTTGTGTGTGAATATCCTTTTCTCCAGTGA | ||
| + | CCTTTCATCCAATGGTTTCAGCATTTTAAATGATCCTGGGCTGAGTCAGTTTTCAGTGGTGGCTGCAGAC | ||
| + | TTGTGGTTTTCCAATTCTTTCATCACTTTTACATTTATTAATTGGCAGTCTATGACTTCTTATAGCCACA | ||
| + | TAAAGATAATTCAGGAATTATCTGAACCTATGAATGTTACCTTATTTGGAAAAAGAGTCTTTGCAGATAC | ||
| + | AATTCAATTAAGAATCTTGAGATGAGGAGATTATCCTGGATTATCCAATGGGCCCTAAATCCAATGACAA | ||
| + | ATGTCCTTGGCAGAGGGAGATTTGAGACAGGAGAAGAGAAGACACGAAGGAGGGAAGGAAGTGATGTGAC | ||
| + | CACAGAGGCAGCGATTGGAGTGATGTAGTCACAAGCCAAGGAGCACCAACAGCCACCAGGAGCTGGAAGA | ||
| + | GCCCAAGAGTATATACTAATACCTGGATTTGGGACTTGGGACTTCTGGTCTCTAGAAGTAGGAAAGAATA | ||
| + | AACATCTGTTTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA</dnaseq> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Sorbonne Universités, UPMC Univ Paris 06, INSERM, Centre de Recherche Saint-Antoine (CRSA)Paris, France. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Balloy V, Koshy R, Perra L, Corvol H, Chignard M, Guillot L, Scaria V. | ||
| + | Bronchial Epithelial Cells from Cystic Fibrosis Patients Express a Specific Long | ||
| + | Non-coding RNA Signature upon Pseudomonas aeruginosa Infection. Front Cell Infect | ||
| + | Microbiol. 2017 May 29;7:218. | ||
| + | |||
| + | </ref> | ||
| + | </references> | ||
Latest revision as of 02:15, 1 August 2017
Contents
Annotated Information
Name
LINC00862:long intergenic non-protein coding RNA 862
Characteristics
genomic location: 1q32.1
Function
LINC00862 couble be a potential signature for Cystic Fibrosis (CF) as it is differentially expressed between CF and non-CF cells [1].
Regulation
Diseases
Cystic Fibrosis [1]
Expression
LINC00862 is differentially expressed between Cystic Fibrosis (CF) and non-CF cells [1].
Sequence
>NR_040064.1 Homo sapiens long intergenic non-protein coding RNA 862 (LINC00862), long non-coding RNA
000001 TGATGAATTT GTGTGTGTTG TGGCTGATGT GCATTTTGGT GCTTTGTATG CAAGTTTAAG AATATCTTAG CAATAGGAAA 000080
000081 GGAAGATTTA TGGCAGTTTA ATTAATGAAT ATAATGAAGG CTAAAACTTG TAGATAAATT TATAAGGTGC TTAAGAGCTC 000160
000161 TTCAATTTGT TAATGGAAAG AAACACCATT TACACCGGAT GGCTACAAAG CAACCTTATT CTGAGAGAGA GGATCTCATT 000240
000241 CTGTCACCCA GGCTGGAGTG CATGATCATA GCTCACTGCA GCCTCGACCT CCTGGGCTCA AGTGATCCTC CTGCTCCAGC 000320
000321 CTCTCAAGTA GCTAGGACTA CAGATCTTTT CTCAGAATAG CAGTCTGTAG GCTGTCACCT AAAGTGTCCT GTTTTCAGTG 000400
000401 CTGCACCTGC TCTGAGCTTC ATCTTTTTAC GAAGACGTCA TGGTGTGCTA TCTGTACTGG GAAACTTTCC CCAGCATCAG 000480
000481 CCATCTCCTG AAGATAACAT TGTCTGCTAG AGATTGTCAT GTATGTGGAT TGAATCTCTT TATCTTCATG GATCCAGTTG 000560
000561 AAAATCAGGC ATTGCATCCA GTTATCATGG CTTTAATCTT AATGCCTTCC CTGCACTGTT TTGGGAATAT CTTAATACTG 000640
000641 CTATTTTTGA AGAGTCCAGC TCAGTTATTC TGCAGAATGT CTGTTGATTT GGCTTTGCTG TTTCCTCATA AGTAGATCCA 000720
000721 GATTATACGT TTTTGTTGAT GTTGGGTTCT TCTCAGTGAA TCACATCCGA TGATGTCAGC ACGAGGCCTG ATCATTTGGT 000800
000801 TTAGGTAGCT TTCACTAGAC TTTTTCATTG TAAAGGTACC TATCCCTTTT CTAATTAATA AGTAATATGT TGGGTGATAG 000880
000881 TTTGTGTGTG AATATCCTTT TCTCCAGTGA CCTTTCATCC AATGGTTTCA GCATTTTAAA TGATCCTGGG CTGAGTCAGT 000960
000961 TTTCAGTGGT GGCTGCAGAC TTGTGGTTTT CCAATTCTTT CATCACTTTT ACATTTATTA ATTGGCAGTC TATGACTTCT 001040
001041 TATAGCCACA TAAAGATAAT TCAGGAATTA TCTGAACCTA TGAATGTTAC CTTATTTGGA AAAAGAGTCT TTGCAGATAC 001120
001121 AATTCAATTA AGAATCTTGA GATGAGGAGA TTATCCTGGA TTATCCAATG GGCCCTAAAT CCAATGACAA ATGTCCTTGG 001200
001201 CAGAGGGAGA TTTGAGACAG GAGAAGAGAA GACACGAAGG AGGGAAGGAA GTGATGTGAC CACAGAGGCA GCGATTGGAG 001280
001281 TGATGTAGTC ACAAGCCAAG GAGCACCAAC AGCCACCAGG AGCTGGAAGA GCCCAAGAGT ATATACTAAT ACCTGGATTT 001360
001361 GGGACTTGGG ACTTCTGGTC TCTAGAAGTA GGAAAGAATA AACATCTGTT TTTTGTTAAA AAAAAAAAAA AAAAAAAAAA 001440
001441 AAAAA
000081 GGAAGATTTA TGGCAGTTTA ATTAATGAAT ATAATGAAGG CTAAAACTTG TAGATAAATT TATAAGGTGC TTAAGAGCTC 000160
000161 TTCAATTTGT TAATGGAAAG AAACACCATT TACACCGGAT GGCTACAAAG CAACCTTATT CTGAGAGAGA GGATCTCATT 000240
000241 CTGTCACCCA GGCTGGAGTG CATGATCATA GCTCACTGCA GCCTCGACCT CCTGGGCTCA AGTGATCCTC CTGCTCCAGC 000320
000321 CTCTCAAGTA GCTAGGACTA CAGATCTTTT CTCAGAATAG CAGTCTGTAG GCTGTCACCT AAAGTGTCCT GTTTTCAGTG 000400
000401 CTGCACCTGC TCTGAGCTTC ATCTTTTTAC GAAGACGTCA TGGTGTGCTA TCTGTACTGG GAAACTTTCC CCAGCATCAG 000480
000481 CCATCTCCTG AAGATAACAT TGTCTGCTAG AGATTGTCAT GTATGTGGAT TGAATCTCTT TATCTTCATG GATCCAGTTG 000560
000561 AAAATCAGGC ATTGCATCCA GTTATCATGG CTTTAATCTT AATGCCTTCC CTGCACTGTT TTGGGAATAT CTTAATACTG 000640
000641 CTATTTTTGA AGAGTCCAGC TCAGTTATTC TGCAGAATGT CTGTTGATTT GGCTTTGCTG TTTCCTCATA AGTAGATCCA 000720
000721 GATTATACGT TTTTGTTGAT GTTGGGTTCT TCTCAGTGAA TCACATCCGA TGATGTCAGC ACGAGGCCTG ATCATTTGGT 000800
000801 TTAGGTAGCT TTCACTAGAC TTTTTCATTG TAAAGGTACC TATCCCTTTT CTAATTAATA AGTAATATGT TGGGTGATAG 000880
000881 TTTGTGTGTG AATATCCTTT TCTCCAGTGA CCTTTCATCC AATGGTTTCA GCATTTTAAA TGATCCTGGG CTGAGTCAGT 000960
000961 TTTCAGTGGT GGCTGCAGAC TTGTGGTTTT CCAATTCTTT CATCACTTTT ACATTTATTA ATTGGCAGTC TATGACTTCT 001040
001041 TATAGCCACA TAAAGATAAT TCAGGAATTA TCTGAACCTA TGAATGTTAC CTTATTTGGA AAAAGAGTCT TTGCAGATAC 001120
001121 AATTCAATTA AGAATCTTGA GATGAGGAGA TTATCCTGGA TTATCCAATG GGCCCTAAAT CCAATGACAA ATGTCCTTGG 001200
001201 CAGAGGGAGA TTTGAGACAG GAGAAGAGAA GACACGAAGG AGGGAAGGAA GTGATGTGAC CACAGAGGCA GCGATTGGAG 001280
001281 TGATGTAGTC ACAAGCCAAG GAGCACCAAC AGCCACCAGG AGCTGGAAGA GCCCAAGAGT ATATACTAAT ACCTGGATTT 001360
001361 GGGACTTGGG ACTTCTGGTC TCTAGAAGTA GGAAAGAATA AACATCTGTT TTTTGTTAAA AAAAAAAAAA AAAAAAAAAA 001440
001441 AAAAA
Labs working on this lncRNA
- Sorbonne Universités, UPMC Univ Paris 06, INSERM, Centre de Recherche Saint-Antoine (CRSA)Paris, France.
