Difference between revisions of "SLC16A1-AS1"
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | SLC16A1-AS1 | + | SLC16A1-AS1:SLC16A1 antisense RNA 1 |
| − | === | + | |
| − | + | ENST00000421157.1<ref name="ref1" /> | |
| − | === | + | |
| − | + | ||
| − | === | + | ===Characteristics=== |
| − | + | ||
| − | === | + | |
| − | + | ===Cellular Localization=== | |
| − | === | + | |
| − | + | ||
| − | === | + | ===Function=== |
| − | + | ||
| − | === | + | ===Regulation=== |
| − | + | ||
| − | == | + | ===Diseases=== |
| − | + | Acute myocardial infarction (AMI)<ref name="ref1" /> | |
| + | ===Expression=== | ||
| + | The expression levels of ENST00000421157.1 is decreased in AMI patients, which identified previously non-reported novel lncRNAs with altered expression in the setting of AMI.<ref name="ref1" /> | ||
| + | |||
| + | |||
| + | ===Sequence=== | ||
| + | >NR_103743.1 Homo sapiens SLC16A1 antisense RNA 1 (SLC16A1-AS1), transcript variant 1, long non-coding RNA | ||
| + | <dnaseq>GCGCGCTGCGCCCCTGCTGAGCGGCGCGGAGCTACCACGCCCTGCCAGACTCGCCCTTGGGTCCCTGTCT | ||
| + | GACGAGCTCTAGGCAATCTGCCCTCGTTCGGGACACAACCATCGGTCTCACCCCTCAGTTTCTGCCAGAG | ||
| + | AAAAAGGAAAAGTCACCGAGAGGCCTGACCCTGACGGGTGGGGGAGATGCGCGTGCGGAGTAGCGGGAAG | ||
| + | CGACTGAGGAGCGGGGAATGGGCAGCATTTGAATGGATGCGGGTGCCGCTGGCACCCGGGAAGACGCTGG | ||
| + | GGGCCGGCGCTGTAGAGCCGGGCATGGGCTGGGATGTGTTTGGATTCCAATCCGGGCCTGACACCAGTTC | ||
| + | AGTGACCTCGGGAAGTTCCCCAACCCTCCGGGCCTGTTTCCTCCCTCTGAAGTGGCGACAGTAGTAGAAC | ||
| + | CGACCTCGTAGGCTCATCGGGAGGTCCTGATGGGAGAACCCATGCAACTTGCCACCATAGAGCCAGGCCC | ||
| + | GCGGCGGTTGGCGCCTGGTGGGTATTAAAGACGAGTCGGGAAAGAAGAGCAGGTAAGAGGGTGGGGAGAC | ||
| + | TGGCCCAGTGGGTTGGGGTGTGCACCTCGGCCACGTGGAAAAGCGAGAATGCAGAGGCCGGACGCTTATG | ||
| + | GACGATGCATATGTGGGGCCGGATAGAATTGTGGCAGGCGGCGCTGGGGCTGATGCTCCTCACCCGGATT | ||
| + | ATCCTCTCTAATCCTCAGCCCTGTGAAGTGGGCACTGCCCTGAACATTTTGTAAATAAGGGACCCGAGGC | ||
| + | TCAGAGAGGTGAAGTAACTTTCCAGACAGCCCAGCTCGTCAGCGGCCAGCATTTGAAGTCACACTCCAGA | ||
| + | GCCTGTTTTTAACATAATAGCCGCTGTGACCGCATAACCAACGTGTGTGTTGAAGTGATCAAATAACCAT | ||
| + | GGAGTGTCTTTGATGTCCAGGACTTTTGAGAAATACCGAAAAATATGAGGCAAGGCCCCTGCCTTCAAAG | ||
| + | AGCTTGCAAGTTTTTGGGGGAGACTTAGGCACAAATTAACCAACATCTGTTGAGCACTTGCTGCTTGCCA | ||
| + | GGACCCTGCCCTTCCCCTCGTGTCTTCCTCCCTTCCAGGACTCACCCCCTCACTTACCCTCCCCCTCACT | ||
| + | TACCCTCCCCCTCAATTCTCACAGCAACCCTGGGAGGTAGGCCTTATGGTTTCTGTTTTGCAAATGAAGA | ||
| + | ACCTGAGATTGAAGAAGAGTAGAGATTGGAGGATCAGATCCTGAGAGGTCCCATGTGCTTTCCAATAACA | ||
| + | GTTCAGTATATTAGAAGACAGTGTGGCATCCACGGCCAAGTACTACTAGTTGATAGACTGGATGCTGCTA | ||
| + | TGGTAATCTGCCTCAGGAAAATGCCGGACTGTTGTTTGCAAGCTGGTTAAGTGAGCAAATCTTGGGAAGA | ||
| + | TTTCAAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAA | ||
| + | AACTTAAAGTGTAACAATAATAAAATTTTTTTAAAAAAAAAAAAAAAAAAAA</dnaseq> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Cardiology, The First Affiliated Hospital of Xinjiang Medical University, Urumqi, China. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Zhai H, Li XM, Liu F, Chen BD, Zheng H, Wang XM, Liao W, Chen QJ, Ma YT, Yang | ||
| + | YN. Expression pattern of genome-scale long noncoding RNA following acute | ||
| + | myocardial infarction in Chinese Uyghur patients. Oncotarget. 2017 May | ||
| + | 9;8(19):31449-31464 | ||
| + | </ref> | ||
| + | </references> | ||
Revision as of 11:00, 7 August 2017
Contents
Annotated Information
Name
SLC16A1-AS1:SLC16A1 antisense RNA 1
ENST00000421157.1[1]
Characteristics
Cellular Localization
Function
Regulation
Diseases
Acute myocardial infarction (AMI)[1]
Expression
The expression levels of ENST00000421157.1 is decreased in AMI patients, which identified previously non-reported novel lncRNAs with altered expression in the setting of AMI.[1]
Sequence
>NR_103743.1 Homo sapiens SLC16A1 antisense RNA 1 (SLC16A1-AS1), transcript variant 1, long non-coding RNA
000001 GCGCGCTGCG CCCCTGCTGA GCGGCGCGGA GCTACCACGC CCTGCCAGAC TCGCCCTTGG GTCCCTGTCT GACGAGCTCT 000080
000081 AGGCAATCTG CCCTCGTTCG GGACACAACC ATCGGTCTCA CCCCTCAGTT TCTGCCAGAG AAAAAGGAAA AGTCACCGAG 000160
000161 AGGCCTGACC CTGACGGGTG GGGGAGATGC GCGTGCGGAG TAGCGGGAAG CGACTGAGGA GCGGGGAATG GGCAGCATTT 000240
000241 GAATGGATGC GGGTGCCGCT GGCACCCGGG AAGACGCTGG GGGCCGGCGC TGTAGAGCCG GGCATGGGCT GGGATGTGTT 000320
000321 TGGATTCCAA TCCGGGCCTG ACACCAGTTC AGTGACCTCG GGAAGTTCCC CAACCCTCCG GGCCTGTTTC CTCCCTCTGA 000400
000401 AGTGGCGACA GTAGTAGAAC CGACCTCGTA GGCTCATCGG GAGGTCCTGA TGGGAGAACC CATGCAACTT GCCACCATAG 000480
000481 AGCCAGGCCC GCGGCGGTTG GCGCCTGGTG GGTATTAAAG ACGAGTCGGG AAAGAAGAGC AGGTAAGAGG GTGGGGAGAC 000560
000561 TGGCCCAGTG GGTTGGGGTG TGCACCTCGG CCACGTGGAA AAGCGAGAAT GCAGAGGCCG GACGCTTATG GACGATGCAT 000640
000641 ATGTGGGGCC GGATAGAATT GTGGCAGGCG GCGCTGGGGC TGATGCTCCT CACCCGGATT ATCCTCTCTA ATCCTCAGCC 000720
000721 CTGTGAAGTG GGCACTGCCC TGAACATTTT GTAAATAAGG GACCCGAGGC TCAGAGAGGT GAAGTAACTT TCCAGACAGC 000800
000801 CCAGCTCGTC AGCGGCCAGC ATTTGAAGTC ACACTCCAGA GCCTGTTTTT AACATAATAG CCGCTGTGAC CGCATAACCA 000880
000881 ACGTGTGTGT TGAAGTGATC AAATAACCAT GGAGTGTCTT TGATGTCCAG GACTTTTGAG AAATACCGAA AAATATGAGG 000960
000961 CAAGGCCCCT GCCTTCAAAG AGCTTGCAAG TTTTTGGGGG AGACTTAGGC ACAAATTAAC CAACATCTGT TGAGCACTTG 001040
001041 CTGCTTGCCA GGACCCTGCC CTTCCCCTCG TGTCTTCCTC CCTTCCAGGA CTCACCCCCT CACTTACCCT CCCCCTCACT 001120
001121 TACCCTCCCC CTCAATTCTC ACAGCAACCC TGGGAGGTAG GCCTTATGGT TTCTGTTTTG CAAATGAAGA ACCTGAGATT 001200
001201 GAAGAAGAGT AGAGATTGGA GGATCAGATC CTGAGAGGTC CCATGTGCTT TCCAATAACA GTTCAGTATA TTAGAAGACA 001280
001281 GTGTGGCATC CACGGCCAAG TACTACTAGT TGATAGACTG GATGCTGCTA TGGTAATCTG CCTCAGGAAA ATGCCGGACT 001360
001361 GTTGTTTGCA AGCTGGTTAA GTGAGCAAAT CTTGGGAAGA TTTCAAGCAC ACCAACATGG CACATGTATA CATATGTAAC 001440
001441 AAACCTGCAC ATTGTGCACA TGTACCCTAA AACTTAAAGT GTAACAATAA TAAAATTTTT TTAAAAAAAA AAAAAAAAAA 001520
001521 AA
000081 AGGCAATCTG CCCTCGTTCG GGACACAACC ATCGGTCTCA CCCCTCAGTT TCTGCCAGAG AAAAAGGAAA AGTCACCGAG 000160
000161 AGGCCTGACC CTGACGGGTG GGGGAGATGC GCGTGCGGAG TAGCGGGAAG CGACTGAGGA GCGGGGAATG GGCAGCATTT 000240
000241 GAATGGATGC GGGTGCCGCT GGCACCCGGG AAGACGCTGG GGGCCGGCGC TGTAGAGCCG GGCATGGGCT GGGATGTGTT 000320
000321 TGGATTCCAA TCCGGGCCTG ACACCAGTTC AGTGACCTCG GGAAGTTCCC CAACCCTCCG GGCCTGTTTC CTCCCTCTGA 000400
000401 AGTGGCGACA GTAGTAGAAC CGACCTCGTA GGCTCATCGG GAGGTCCTGA TGGGAGAACC CATGCAACTT GCCACCATAG 000480
000481 AGCCAGGCCC GCGGCGGTTG GCGCCTGGTG GGTATTAAAG ACGAGTCGGG AAAGAAGAGC AGGTAAGAGG GTGGGGAGAC 000560
000561 TGGCCCAGTG GGTTGGGGTG TGCACCTCGG CCACGTGGAA AAGCGAGAAT GCAGAGGCCG GACGCTTATG GACGATGCAT 000640
000641 ATGTGGGGCC GGATAGAATT GTGGCAGGCG GCGCTGGGGC TGATGCTCCT CACCCGGATT ATCCTCTCTA ATCCTCAGCC 000720
000721 CTGTGAAGTG GGCACTGCCC TGAACATTTT GTAAATAAGG GACCCGAGGC TCAGAGAGGT GAAGTAACTT TCCAGACAGC 000800
000801 CCAGCTCGTC AGCGGCCAGC ATTTGAAGTC ACACTCCAGA GCCTGTTTTT AACATAATAG CCGCTGTGAC CGCATAACCA 000880
000881 ACGTGTGTGT TGAAGTGATC AAATAACCAT GGAGTGTCTT TGATGTCCAG GACTTTTGAG AAATACCGAA AAATATGAGG 000960
000961 CAAGGCCCCT GCCTTCAAAG AGCTTGCAAG TTTTTGGGGG AGACTTAGGC ACAAATTAAC CAACATCTGT TGAGCACTTG 001040
001041 CTGCTTGCCA GGACCCTGCC CTTCCCCTCG TGTCTTCCTC CCTTCCAGGA CTCACCCCCT CACTTACCCT CCCCCTCACT 001120
001121 TACCCTCCCC CTCAATTCTC ACAGCAACCC TGGGAGGTAG GCCTTATGGT TTCTGTTTTG CAAATGAAGA ACCTGAGATT 001200
001201 GAAGAAGAGT AGAGATTGGA GGATCAGATC CTGAGAGGTC CCATGTGCTT TCCAATAACA GTTCAGTATA TTAGAAGACA 001280
001281 GTGTGGCATC CACGGCCAAG TACTACTAGT TGATAGACTG GATGCTGCTA TGGTAATCTG CCTCAGGAAA ATGCCGGACT 001360
001361 GTTGTTTGCA AGCTGGTTAA GTGAGCAAAT CTTGGGAAGA TTTCAAGCAC ACCAACATGG CACATGTATA CATATGTAAC 001440
001441 AAACCTGCAC ATTGTGCACA TGTACCCTAA AACTTAAAGT GTAACAATAA TAAAATTTTT TTAAAAAAAA AAAAAAAAAA 001520
001521 AA
Labs working on this lncRNA
- Department of Cardiology, The First Affiliated Hospital of Xinjiang Medical University, Urumqi, China.
