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| | LINC02490:long intergenic non-protein coding RNA 2490 | | LINC02490:long intergenic non-protein coding RNA 2490 |
| | | | |
| − | RP11-209E8<ref name="ref1" /> | + | RP11-209E8 <ref name="ref1" /> |
| − | ===Characteristics===
| |
| − | | |
| − | | |
| − | ===Cellular Localization===
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| − | | |
| | | | |
| | ===Function=== | | ===Function=== |
| − | LncRNA RP11-209E8 can conserved interact with miR-210.<ref name="ref1" /> | + | LncRNA RP11-209E8 is found to have conserved interaction with miR-210 based on the prediction results of mircode (http://www.mircode.org/) <ref name="ref1" />. |
| − | ===Regulation===
| |
| | | | |
| − | ===Diseases===
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| − | Osteosarcoma<ref name="ref1" />
| |
| | ===Expression=== | | ===Expression=== |
| − | The expression of lncRNA RP11-209E8 is no significant difference in osteosarcoma tissues and their matched non-tumor tissues.<ref name="ref1" />
| + | Although RP11-209E8 is predicted to have conserved interaction with miR-210 and miR-210 is an important gene in osteosarcoma regulation, its expression shows no significant difference in osteosarcoma tissues and their matched non-tumor tissues <ref name="ref1" />. |
| | + | |
| | ===Sequence=== | | ===Sequence=== |
| − | >XR_001751549.1 PREDICTED: Homo sapiens uncharacterized LOC105370822 (LOC105370822), ncRNA | + | >NR_147181.1 Homo sapiens long intergenic non-protein coding RNA 2490 (LINC02490), long non-coding RNA |
| − | <dnaseq>TAAGTCCAAAGTCCTATGTTCAGATACTGACATGGGTGACAAAAAGAAAAGCTTAGTTTCTACTCTTCAG | + | <dnaseq>GCTCTCTTCTGCTCTTCTGCCCTGTGAGGATGCAGCAAGAAAACCCTCACCAGATGCCAGTGCCTTGATC |
| − | GAGCTCAGAGTCTGGGGGAGGGACAGACACAAATAACCAGTGAACGTGAAAATGGCAAAATAAGTGCTTT
| + | TTGGACTTCCCAGCCCCCAGAGCTGACTAGATCGCTAGCTGGCCCTTTGATTTAACTCTTCATCTACCAT |
| − | GGGAAGAGGCGAGGGAAAAATGAGATCCTGCCAGCTCCCCTTGTATCCGTTTCACTGGAAATGTTTTTCT
| + | AGTCAGGTGCCACAGCTTGATGAACGAGATAGAATCGCACAATGGGATCAAAGGGACAGCCAGCCCAGTT |
| − | CTATTTTCACTCATAAACCACCTGCTTGGGACTCCGTTGGCCATCACCAATACATTTTCTTTTTCTCTGT
| + | TATTTCCAGAGGAAAAGCTTACCAGGACACAAAGGAGGAAAAAAGACTCGGCTTGAAACCAATTCTTCCC |
| − | ATCTCTTGTCCAGCTCAACCCTGCTAGAGCAACTTCCTTTGCTGATGTGCAAGAGGCTTTCTTTTCACCC
| + | TGAAGTACAAATGTAAGAGAAAAGACATCACCAGGAGCAGTTACGTCTATGGCAATCGTAGCTCTGTAAG |
| − | CTTCCTATCAGCCAGGGTTCAATTGCAGTCCACAGAGCCCATTCAAGTTTGATTAAGCAGAAAGATATTT
| + | CCTGGCCTGCTCACGTGGAAGTAAATTATTTGATGAGCTGGGGAAATATAAGCAGTTTGTGTGGATTAAA |
| − | ATTACAGGGTATTAGGAACTTACAGATTTCTAGGGACAGGTGAGAGAACCAAACATGAATGCCAGACAGC
| + | AGGAAATCCTCACCCAAACTATATCTTTAAAAATTATCTAGATAATTCAGGTGAAAGCAGGCTTTCTCCC |
| − | AGAAGTGAGCAGCGAGGAAGAATGCTCAGTTACTCCCTGAGGCTGTTCCAGTGGAAAGTCCACAGCTGCT
| + | TTGTGAATTATTAAAGTAATTGATTACATCCATCTGCTCCTCGTCAGAGAATTCAAGGGCCAAATGCTTT |
| − | GCCACCTGTCACTCTACATTCATAAAACTACTACCTGAACACCAGAACCTCTGCTACAGCTGCTGCAGAT
| + | TTCGGCGTCTCCTTTTCTATCCTTCCCTTTCATGTGACTTA</dnaseq> |
| − | TAACTCAACACTTTTATGACCAGTGCTTGCCAGAAAAGGCTGTGGCCTTATCAATTTTAATTTTTTAATC
| + | |
| − | CAAAGACTCACAGGGTGCATTTGCTTGGTTGAAGCTAGTCATGTGCAAGGGATGTTTGAAATGGAGGTTT
| |
| − | TCAGATTCTTCTTGGGAAAAGCTTAATGAATCATGCGTAAAACTACCAAAATGAGGTTAACAGAATCATT
| |
| − | GGGAGCCACAAATGACAGGTCTATTTTATCTATTGTATCATCACTTAGACTATTTGCCCTTAGAAAGTTT
| |
| − | GAGCACAGGTTTTAAAAAACATTTAATGATATGCACAGAGGGGCCTGGTAGAGTATACCATTTCAACATT
| |
| − | TTACCAGGTGTAATGTTCTGAATGTGTTCCCTTAAATTTATGTGTTGGAAACATAATCCTGAATGTAACA
| |
| − | GTGTTGGGGGCTGGGGCAGAATGGGACATGCCTAGGTCATGAGGACTCTGCCCTCATGAAAGGATTAATG
| |
| − | CTGCTATAAAAACAGCCTGCAGGAGTGGCTTTGCTCTCTTCTGCTCTTCTGCCCTGTGAGGATGCAGCAA
| |
| − | GAAAACCCTCACCAGATGCCAGTGCCTTGATCTTGGACTTCCCAGCCCCCAGAGCTGACTAGATCGCTAG
| |
| − | CTGGCCCTTTGATTTAACTCTTCATCTACCATAGTCAGGTGCCACAGCTTGATGAACGAGATAGAATCGC
| |
| − | ACAATGGGATCAAAGGGACAGCCAGCCCAGTTTATTTCCAGAGGAAAAGCTTACCAGGACACAAAGGAGG
| |
| − | AAAAAAGACTCGGCTTGAAACCAATTCTTCCCTGAAGTACAAATGTAAGAGAAAAGACATCACCAGGAGC
| |
| − | AGTTACGTCTATGGCAATCGTAGCTCTGTAAGCCTGGCCTGCTCACGTGGAAGTAAATTATTTGATGAGC
| |
| − | TGGGGAAATATAAGCAGTTTGTGTGGATTAAAAGGAAATCCTCACCCAAACTATATCTTTAAAAATTATC
| |
| − | TAGATAATTCAGGTGAAAGCAGGCTTTCTCCCTTGTGAATTATTAAAGTAATTGATTACATCCATCTGCT
| |
| − | CCTCGTCAGAGAATTCAAGGGCCAAATGCTTTTTCGGCGTCTCCTTTTCTATCCTTCCCTTTCATGTGAC
| |
| − | TTACTCTTGTCTGAATCAGGAGTTTCTGTGAATAATCACCGGCCAGCTGTCACCGGTTCTCTTTTCACCT
| |
| − | GTTCTCTTTGCAAATCTGAGCAATCCAAACCTGCAGGGGTAACATTCCCCAACTGACTGAGAGTACATAA
| |
| − | GTGGTTCTTCAGCTCTGAGATGATCCTATCATTGGCTGCTTTAAAATTTGTGATTAGTCTGCTTTTTGGG
| |
| − | CATGTGAAATATAATTGGTGGTGCAGATAAACTTTTATTCACCAGAGAGAGCTTATTACAGAGCTGCTTG
| |
| − | TCATGACACGTGGAAACTCAGGAAACTTCTGTGGAGTCTCTGTGTGGCGATTCTGGCCAGAATGGTCGTA
| |
| − | TGTTTTCAAGATGCTAACTCTAGTTTCCCCAAAGCTGTCTTTTGCCTGCTGGCTTTGGTCCTATTCCACG
| |
| − | TGACTGTGGAGTGCCTCAAACTCAAGACAGCAAATGGGAAAGGAACAGGATCTGGCTCCTGGGAATGGCC
| |
| − | TGCTACCTGACAAGGTGCCCTGATCAGCTGAGTGCTAAAAACCCCGTGCTGCCCTGTGAGCCTACACGTC
| |
| − | GGGTGAATGATCTCCAGCTGGATACATAGGGGGATGCAGGGTTAAAATGGAAGTATTTGTTTCAATTTAA
| |
| − | TTAAACATTTTAGCCAAAATTCTACGTAAGCTGTGTTATATGTAAACTTGAAACCCAAACCCCTGGTTTC
| |
| − | AGTTGCCCCCTCTTATAATTATGAGGTTCATAATCTTGGCCTTGGATAAATCATATAAGTTCTTTGAGCC
| |
| − | ATAGGTTTTCCATCTGTAAAGTGGGGATAATGGTTCCTGCCAGGCCTCTCTGGGTTGTCATGAAATTTGA
| |
| − | ATGAGAACCTGAAAGCAATTAGGGAGCTCTAAGCAAGCTGTGTAACTATATGACAAACGGGTGCGTGGTT
| |
| − | TAGAATAATAATGTGTATTGAGCACTTACTATGTGTGAGGCATTGGTCTACCTTACATGTAGTCACTCAC
| |
| − | TTAGTTGTCATCACAACCCCATGAGATGGATACTATGATTGTTTGTTCCACCTTTCATGATGGAGAAAGT
| |
| − | AAGGCAGAATGGTTAAGTAACTTGTCTTAGGTGGCCCAGCAGAGAAGTGGCCTGGCTCTGGAGTCTGAGC
| |
| − | TCTTAATTTCTGTATACCTATAGCACCTTCTACATCAGCTTTCTAGGAGCAATGTGTATTGGTAAGTGGA
| |
| − | TACAAGTCCTTGAGAAGTACCAGTCTAGTCCTTGTTTTGGTTAAATTGGCTAATTGACTAATAACAGTAG
| |
| − | AGGCCTTCTCTAGCATGGGATACCCAAAGCTTCAATCAGGTAGGACCACTAGGCATGGTAGCTGCTGTCA
| |
| − | GGATCAGTATAGCCACCTGAGTGCCACCTCCACCTCCCTCCCAACTTCTTCCCCACTCTTCTGGCTCTGC
| |
| − | CAGGAAACTATGGTGCAACACTGTCAGGCTGCATGGGAGGAGGAGAGCACAGACTAGGAACCCCATGGGG
| |
| − | TTGTCCTTGAATTAGTCCTTCTTCCTGACTTTCAGGATTCAGCCATGAATACTGCCCCCTGAGGGAGCAG
| |
| − | GAACCAGCACATTGTCCTGTACTCCAAGTGGGGTTCATACCCCCTTCCTTTTGTCTTCAGGAATTCTATA
| |
| − | GCGATTCTTCCCGATTAAATACATGCCGGTCAATTAGGAGCTTATGGGCTCAAATCCATGAGGCCTGATG
| |
| − | ATTGACTCTCCTTGGTCCATCTTTCTCAGCAGGAACAGACAAATCATCAGGAATTTGAACATGTGTCTTT
| |
| − | TAAACCCACCTTCCTTTGCTGCTTGCTATGCATGATGAAATTTCACATGAGAAATCATGAGATCCTCGCA
| |
| − | AGATGCTCTTTGTTTGCCAATGAATTTTGATTTGGTTTTAGAAAAGTGGAAAGTGCAAATAGAATTAGGC
| |
| − | TTGAAAATTATTCAAGAATCATTTTAATGCTCCCAGGAGATTGGTCTGCTAACTCACATAGATTTCTGCT
| |
| − | CTCTGTCAGAATTTAGCCACTTCAAGGAAGCTTTTGTTTAGAAAGAGGTAAAATCTTTTAGAGAGAGATC
| |
| − | ACTTGTGAATTATTTGACAATTGCTCGTATTTGCTTAATGTTCTAGAGAGACATAACAGGGTATTTGAGA
| |
| − | TTTTACATTTTATATAATGTGACTTCTGAAAATGTATTTTGGTTTCCTTTTTGAAAGATTTTTGCCTTTA
| |
| − | TAAAAATGATAATGAATTATAATAGCTCTAATTATTAGCCACATTCTCTGTTAGACACTTTATACAATCT
| |
| − | CTGTTATTCTTCCCAGCAATCTTTGCAATGTAGAGATTATAATTTTATTTTATTTATGATAAAACTTTAT
| |
| − | GTGTCCTCTCAGAGAGATTAAGTAACTTGCAGAGGATCATAGAGCTGATTGTCAGTTAAGCTGGAATTCA
| |
| − | AATCCTAGTCATTGTAACTCTAACCCCACAGCATCTTAGACCTGTTGGCCCCTCAGAAGGAAGGGTGGGC
| |
| − | CTAGAACTTCAGTGCTACCCCTTCTCTGACATCACTAGTTACTAAATCTGCAATCAGCCTCAGCCTGTGC
| |
| − | TTGGTCAACTGTAGCTAGGAGCAGCCAGGAATCTTAAAGGGCCTCTAGAGAGAATTCCCAAATAGGTTCC
| |
| − | TTTCCCTCTGAATTAGTAGATAGGCAGGTCTTTGGCTCATTTGGAGGGTAGGTTAGCAGGGCATAATGGT
| |
| − | TAAGTGCTCAGGTCCTGGAGTTAGTCAGACTTGGTTCAACTCTCAGCTTTATCAATCTGGGCAAGTTTCT
| |
| − | TATTCTCTTACTATATAGTTTATGAGAGTTAGACAGAGGATTGCAGGTAAAGCATGTAGCTAATGCCTGG
| |
| − | CGTGTGGTGGGCTCAATAATGTCATTTATTATTATTGTTCTATGTTGCTGTAGAGGGAGAAAAAGCTCAG
| |
| − | ACTGTAGGTTTATTCATACTGTTTCCTTGTTTCTTCTATGCACTAAAGTCCCTTAAATAGTTAACCATTG
| |
| − | GAAAACTGTGTATTTTAGAAGAAGAAGAAGGTAGATTTTAGCTTAAAAGCATTCATTTCAGACTATATTG
| |
| − | CTAACTAATGGCAGAATCAAGAATGAAGACACAGGACTTCAGACTCCATTTCCATGATTCTCTTTACCAC
| |
| − | ACAAAGGCAGGAACCTTCCAGGTGTCTGGCAATACCACCAGTATAATGATAAGAAACATTTATGTTGCAC
| |
| − | CTATGGTGCTGATCACTTTACACACCTGACCTGACCTAATCCTCATCACAGCCTATGAAGTAGATAGCTC
| |
| − | CATGCAGATGAGGAAACTGAGCCTTGGAGAAATTAAACAGCCTCAGGTCCCAAGATACATGAATGTAATC
| |
| − | CAGGATCCAAACTGTCTGTCTTTGATACTGAGACTTTACAGTGCAGTACCTGCTGGTGTAATTCCTTCTG
| |
| − | GAATCAATAAGCCTATAGATCTGAGTAAGAAACCACCACTGATGTGATCATTGAGACACCACTTAGAGTG
| |
| − | AAGCCAGTCCCTTTCTCTCAAAGTGGAGCACATGAAGCTCTGGAGGGAACTGGTCTGTGGGCTGGGGCTC
| |
| − | AAGGAATTGCATGGAAATAGGGGGAAACCTATGCTTTTTATATGAAAGCAAATGGATATTGTGGAATAAG
| |
| − | ATGCTAAATTTACATGAATATTAAAGAATAAACAGGAGGCTTTGACTACATTTTGAGCTTTTAAATTTTG
| |
| − | TTTCTGAACCTCCAGAGACTCAAGCTTACTGGCTATTGGTGTCAGGAACACTCCCATGAAAGAGTTTTGG
| |
| − | AAATCCTGACTCAGCCAGTCCACAAAGTTCACTTCTTGCTTTGGCAAATGAACACACACAAAAAATCACT
| |
| − | GAGCTACGATTGCTTTTTGCAACTCGTTGCAGCAAGAAGCTGTTGGCCATTGATTAGCAATGGGCACATT
| |
| − | TTTCACCAAAGGCTTTGCCCTCCCTTTGCTTCGCTAATCCTGTTTGCAAGCATTTCCCCACAGAGATCGC
| |
| − | TACTTCCTCATAATGAATAAGCTCGCACTTGTGAGTTCAAACTGGCAAATTGCCACCAGACATTTATTAG
| |
| − | CTCTGGATTAATGGATCAAGACTCAAACTTTCTAGTTAAAAGAACAAGACAAGCCCTTAGGATTCAAGAC
| |
| − | TCTTTAAAAAAATCCTCATTCACTTGGCATTACCATTTCTTGCAGTCCTTCCTCTCCCTTGTAGGGTTCG
| |
| − | ATTTGTCAGTAAAGCAGTGGAAAGGACTTATTTTTCAGCCATTTTGGATCAGAGAAAATTGTTGATCTTA
| |
| − | GTTGTTCATGTTTTCCTGGGACTTTTAAATGGGACTGGTGTTCTGGCAGAAATTACTGGAATATGCTAGG
| |
| − | TGGAAGGAGACTAACATTGCCATGACATCATGGGCTCAAAGGGGCAGGTAGAGGCAAGGTTGGGAGGGTG
| |
| − | ATCCTCCTGGAGAAGAAAAAGACTCAAGGGGCTGTGTGAATTGTCCAAAGACTGCTGGCAGGCTGAGCTG
| |
| − | GAGGAAGAAAGGTCACCCTTATTCTTACAGCTACAAAGAGCTGTGCAGAGACTCCTGAGTGGGACCCTGG
| |
| − | GAGACAGATTTTGGTTCAGAAAGAAAATGGAATTTCTGGAATAGTCAAAGAGGCTCAGAATTAGAATGGC
| |
| − | TACTTCAGAAGGCATTAGCTCTTCATTCTTAGAGGGAAGAGGGTGGGCAGAGAGAGAGAGAGAAAGAGAG
| |
| − | AGAGAGACTTGCTTTAGTGAGCATATACTGTGTGCGGAATCTTTCATAGGTTATTTCTTTTCATCTTCTC
| |
| − | AACACCATTGTAAAC</dnaseq>
| |
| | ==Labs working on this lncRNA== | | ==Labs working on this lncRNA== |
| | *Department of Orthopaedics, The Third Xiangya Hospital, Central South University, Changsha, Hunan 410013, China. | | *Department of Orthopaedics, The Third Xiangya Hospital, Central South University, Changsha, Hunan 410013, China. |
