Difference between revisions of "LINC00226"
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | LINC00226 | + | LINC00226:long intergenic non-protein coding RNA 226 <ref name="ref1" /> |
| − | + | ||
| − | long intergenic non-protein coding RNA 226 | + | ===Expression=== |
| − | === | + | LINC00226 is downregulated in 10 Pancreatic ductal adenocarcinoma(PDAC) cell lines comparing with the immortalized non‐malignant pancreatic duct cell line (HPDE) <ref name="ref1" />. |
| − | " | + | |
| − | === | + | ===Sequence=== |
| − | + | >NR_033375.2 Homo sapiens long intergenic non-protein coding RNA 226 (LINC00226), long non-coding RNA | |
| − | == | + | <dnaseq>GCGGCCGCTCCGACCCGGCCTCTGGCGCTGGCTCTCCGCCCGCTGGGCATCCGCTCCCCGCGCGGCACGT |
| − | + | GCGGCGGCCCCTGCGCGCCTGGCTCAGCCCTGGCGCCGCTCCATTCCGCCAGGCGCGGGCGGGCAGGAGC | |
| − | == | + | TCTGGAAAAAATTATTCTAAGAGACAAATTAAAAGAATAATCTGTAATAAGGAGACGTCAACATTCCATC |
| − | + | TCAGGAAAAAACTGAAAACATGTAATACATACAAAGTCCTGAGAAGAAACCTCGAAGCACAGGAAGGGTC | |
| − | = | + | TCATGTATAGTAGCATGTTGAGAAAACTGAAGAGCCCTGTAATCCTGAGGAGGGGGCCTAATCCAAGGAG |
| − | + | AGAGAGGCTCCGGGTCCTGTGGACACACACGGGTTGCCTGCTTCACCCCATCTAGGAGCTGCTTCCTGAA | |
| − | + | GCCTTCAGGAGGCAGGAGGCTGAATTTGTTTCTCAGGACAATCTTAATCACATCCGGACAGGGAGAAAAA | |
| − | + | CATTCATGACCTAGGACAGATAAAATATGTATAATTAAAATTTCATTGAAAATTGAGAAATTTTGGTTGT | |
| − | + | ATGTATTTATAGTGAATAAAGCTATGTTATGATTTA</dnaseq> | |
| − | + | ==Labs working on this lncRNA== | |
| + | *Department of General Surgery, The Affiliated Yantai Yuhuangding Hospital of Qingdao University, Yantai, China. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Yu X, Lin Y, Sui W, Zou Y, Lv Z. Analysis of distinct long noncoding RNA | ||
| + | transcriptional fingerprints in pancreatic ductal adenocarcinoma. Cancer Med. | ||
| + | 2017 Mar;6(3):673-680. | ||
| + | </ref> | ||
| + | </references> | ||
Latest revision as of 07:49, 31 August 2017
Contents
Annotated Information
Name
LINC00226:long intergenic non-protein coding RNA 226 [1]
Expression
LINC00226 is downregulated in 10 Pancreatic ductal adenocarcinoma(PDAC) cell lines comparing with the immortalized non‐malignant pancreatic duct cell line (HPDE) [1].
Sequence
>NR_033375.2 Homo sapiens long intergenic non-protein coding RNA 226 (LINC00226), long non-coding RNA
000001 GCGGCCGCTC CGACCCGGCC TCTGGCGCTG GCTCTCCGCC CGCTGGGCAT CCGCTCCCCG CGCGGCACGT GCGGCGGCCC 000080
000081 CTGCGCGCCT GGCTCAGCCC TGGCGCCGCT CCATTCCGCC AGGCGCGGGC GGGCAGGAGC TCTGGAAAAA ATTATTCTAA 000160
000161 GAGACAAATT AAAAGAATAA TCTGTAATAA GGAGACGTCA ACATTCCATC TCAGGAAAAA ACTGAAAACA TGTAATACAT 000240
000241 ACAAAGTCCT GAGAAGAAAC CTCGAAGCAC AGGAAGGGTC TCATGTATAG TAGCATGTTG AGAAAACTGA AGAGCCCTGT 000320
000321 AATCCTGAGG AGGGGGCCTA ATCCAAGGAG AGAGAGGCTC CGGGTCCTGT GGACACACAC GGGTTGCCTG CTTCACCCCA 000400
000401 TCTAGGAGCT GCTTCCTGAA GCCTTCAGGA GGCAGGAGGC TGAATTTGTT TCTCAGGACA ATCTTAATCA CATCCGGACA 000480
000481 GGGAGAAAAA CATTCATGAC CTAGGACAGA TAAAATATGT ATAATTAAAA TTTCATTGAA AATTGAGAAA TTTTGGTTGT 000560
000561 ATGTATTTAT AGTGAATAAA GCTATGTTAT GATTTA
000081 CTGCGCGCCT GGCTCAGCCC TGGCGCCGCT CCATTCCGCC AGGCGCGGGC GGGCAGGAGC TCTGGAAAAA ATTATTCTAA 000160
000161 GAGACAAATT AAAAGAATAA TCTGTAATAA GGAGACGTCA ACATTCCATC TCAGGAAAAA ACTGAAAACA TGTAATACAT 000240
000241 ACAAAGTCCT GAGAAGAAAC CTCGAAGCAC AGGAAGGGTC TCATGTATAG TAGCATGTTG AGAAAACTGA AGAGCCCTGT 000320
000321 AATCCTGAGG AGGGGGCCTA ATCCAAGGAG AGAGAGGCTC CGGGTCCTGT GGACACACAC GGGTTGCCTG CTTCACCCCA 000400
000401 TCTAGGAGCT GCTTCCTGAA GCCTTCAGGA GGCAGGAGGC TGAATTTGTT TCTCAGGACA ATCTTAATCA CATCCGGACA 000480
000481 GGGAGAAAAA CATTCATGAC CTAGGACAGA TAAAATATGT ATAATTAAAA TTTCATTGAA AATTGAGAAA TTTTGGTTGT 000560
000561 ATGTATTTAT AGTGAATAAA GCTATGTTAT GATTTA
Labs working on this lncRNA
- Department of General Surgery, The Affiliated Yantai Yuhuangding Hospital of Qingdao University, Yantai, China.
