Difference between revisions of "LINC00969"

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(Created page with "==Annotated Information== ===Approved Symbol=== LINC00969 ===Approved Name=== long intergenic non-protein coding RNA 969 ===Previous Symbols=== _ ===Synonyms=== ENST0000045332...")
 
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==Annotated Information==
 
==Annotated Information==
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===Approved Symbol===
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===Name===
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LINC00969
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LINC00969:long intergenic non-protein coding RNA 969
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===Approved Name===
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long intergenic non-protein coding RNA 969
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ENST00000453324<ref name="ref1" />
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===Previous Symbols===
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===Characteristics===
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_
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LncRNA ENST00000453324 , also named as LINC000969, is transcribed from the intron area of gene mucin 20 (MUC20), which is located on the sense strand of chromosome 3.<ref name="ref1" />
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===Synonyms===
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ENST00000453324
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It is a intron sense overlapping LncRNA.<ref name="ref1" />
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===Chromosome===
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===Expression===
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3q29
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===RefSeq ID===
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The expression of LncRNA ENST00000453324 is significantly upregulated in early stage LSCC(lung squamous cell carcinoma).<ref name="ref1" />
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_
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===OMIM ID===
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===Diseases===
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_
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lung squamous cell carcinoma<ref name="ref1" />
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===RefSeq(supplied by NCBI)===
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===Sequence===
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NR_122105
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>NR_122105.1 Homo sapiens long intergenic non-protein coding RNA 969 (LINC00969), long non-coding RNA
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===pubmed IDs===
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<dnaseq>ATTTAAATTTTTTTTAATGATGTCTTTTTTGGCAGTGCACAGCCAGAGGACAACACATCACACACAAGAA
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28076325
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ACAGTTGTGCTCATGTGATGGGGGCCTCAGCACTAGGAAGGAGTGGACTGTTGGCGCACGCAGCAGCTTG
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AATAAATCTGAAAGTCACTACGCTGCGTAAGAGAAGCCAAATAAAGCGCATGCTGTGTACAGAGGGTGTC
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GAGAATGCCTCCTACGTGACGGAAAGCAGATCCGTGGTTCCCTGCAGACTGGCAGGAGCAGATTCCAAAG
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GCACAGGAAGAAGCTTGCAGTACAAAGATAAAAATCTAAAGTGGTTGCTGTGGAGGACAGGGGTCAGTGG
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TGGAAGTGAGACCGAAATAGACTCTGAAGTAATATCTGGACTTTGAAATTGCAGCTGCTCCCAACCCCAG
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AACCTTTGCTGTCTTGGGACGGATCACCGCTGCAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATG
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TGGCACCAGACTGCCACCCAGACCACAGTGTCCTCTGCAACCCTGCTTCTCAGATGACCAAGATGGTGCT
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GCAGATGGTGCTGAGGATGGAGAACCCACCAAGCCCCGCTAGGAGCCACCTAGACTGGATGCAGAGCATG
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GTTCAGTGAGTTCTCCAAACCAGCCTCCCAGGAATGCCATTCAACATGGCTGTGAGGAGAATAAAGAAGA
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GAGCCTGACTCCTCTCCTGAGGCCCCTTCCCCACCCTGAGCCAGCAGGATCCACGGAGCAGAGGTCATCT
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GTCCCCAGCTTGGCCCACTGAGGCCAGCATGGCTGGGCCCAGGATGCTTGTCTCTCAGCTCCCATCCTGT
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GTACTTCCACATTGGTTTAACCAGAGGAAAACCGAAATCTACAATTGTCATAAACACATTTAAATGTGCG
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TAGAATCAGCCATACAAATTGTGAAACATA</dnaseq>
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==Labs working on this lncRNA==
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*State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai 200050, China.
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==References==
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<references>
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<ref name="ref1">
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Cheng Z, Bai Y, Wang P, Wu Z, Zhou L, Zhong M, Jin Q, Zhao J, Mao H, Mao H.
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Identification of long noncoding RNAs for the detection of early stage lung
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squamous cell carcinoma by microarray analysis. Oncotarget. 2017 Feb
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21;8(8):13329-13337.
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</ref>
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</references>

Revision as of 11:40, 7 September 2017

Annotated Information

Name

LINC00969:long intergenic non-protein coding RNA 969

ENST00000453324[1]

Characteristics

LncRNA ENST00000453324 , also named as LINC000969, is transcribed from the intron area of gene mucin 20 (MUC20), which is located on the sense strand of chromosome 3.[1]

It is a intron sense overlapping LncRNA.[1]

Expression

The expression of LncRNA ENST00000453324 is significantly upregulated in early stage LSCC(lung squamous cell carcinoma).[1]

Diseases

lung squamous cell carcinoma[1]

Sequence

>NR_122105.1 Homo sapiens long intergenic non-protein coding RNA 969 (LINC00969), long non-coding RNA

000001 ATTTAAATTT TTTTTAATGA TGTCTTTTTT GGCAGTGCAC AGCCAGAGGA CAACACATCA CACACAAGAA ACAGTTGTGC 000080
000081 TCATGTGATG GGGGCCTCAG CACTAGGAAG GAGTGGACTG TTGGCGCACG CAGCAGCTTG AATAAATCTG AAAGTCACTA 000160
000161 CGCTGCGTAA GAGAAGCCAA ATAAAGCGCA TGCTGTGTAC AGAGGGTGTC GAGAATGCCT CCTACGTGAC GGAAAGCAGA 000240
000241 TCCGTGGTTC CCTGCAGACT GGCAGGAGCA GATTCCAAAG GCACAGGAAG AAGCTTGCAG TACAAAGATA AAAATCTAAA 000320
000321 GTGGTTGCTG TGGAGGACAG GGGTCAGTGG TGGAAGTGAG ACCGAAATAG ACTCTGAAGT AATATCTGGA CTTTGAAATT 000400
000401 GCAGCTGCTC CCAACCCCAG AACCTTTGCT GTCTTGGGAC GGATCACCGC TGCAAGAGGG GAAGTTGCTA CTGTGATGAA 000480
000481 TTCTGCCATG TGGCACCAGA CTGCCACCCA GACCACAGTG TCCTCTGCAA CCCTGCTTCT CAGATGACCA AGATGGTGCT 000560
000561 GCAGATGGTG CTGAGGATGG AGAACCCACC AAGCCCCGCT AGGAGCCACC TAGACTGGAT GCAGAGCATG GTTCAGTGAG 000640
000641 TTCTCCAAAC CAGCCTCCCA GGAATGCCAT TCAACATGGC TGTGAGGAGA ATAAAGAAGA GAGCCTGACT CCTCTCCTGA 000720
000721 GGCCCCTTCC CCACCCTGAG CCAGCAGGAT CCACGGAGCA GAGGTCATCT GTCCCCAGCT TGGCCCACTG AGGCCAGCAT 000800
000801 GGCTGGGCCC AGGATGCTTG TCTCTCAGCT CCCATCCTGT GTACTTCCAC ATTGGTTTAA CCAGAGGAAA ACCGAAATCT 000880
000881 ACAATTGTCA TAAACACATT TAAATGTGCG TAGAATCAGC CATACAAATT GTGAAACATA

Labs working on this lncRNA

  • State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai 200050, China.

References

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Cheng Z, Bai Y, Wang P, Wu Z, Zhou L, Zhong M, Jin Q, Zhao J, Mao H, Mao H. Identification of long noncoding RNAs for the detection of early stage lung squamous cell carcinoma by microarray analysis. Oncotarget. 2017 Feb 21;8(8):13329-13337.
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