Difference between revisions of "HDHD5-AS1"
| Line 12: | Line 12: | ||
===RefSeq ID=== | ===RefSeq ID=== | ||
NR_024483 | NR_024483 | ||
| − | |||
| − | |||
===RefSeq(supplied by NCBI)=== | ===RefSeq(supplied by NCBI)=== | ||
NR_024482 | NR_024482 | ||
| + | |||
| + | ===Characteristics=== | ||
| + | The distance between HDHD5-AS1 and the adjacent gene CECR5 is at least 99 bp <ref name="ref1" />. | ||
| + | |||
| + | ===Conservation=== | ||
| + | The sequences of exon 1 of HDHD5-AS1 is conserved in human and mouse <ref name="ref1" />. | ||
| + | |||
| + | ===Disease=== | ||
| + | cat eye syndrome | ||
| + | |||
| + | ===Expression=== | ||
| + | {| class='wikitable' style="text-align:center" | ||
| + | |- | ||
| + | ! | Gene name | ||
| + | ! | Probe used | ||
| + | ! | Size of transcript(s) in kb | ||
| + | ! | Tissues showing expression | ||
| + | |- | ||
| + | | rowspan="1"|CECR8 | ||
| + | | | cDNA 1840041 | ||
| + | | | 1.4 | ||
| + | | | Testis | ||
| + | |- | ||
| + | | rowspan="1"|CECR4 | ||
| + | | |cDNA 321686 | ||
| + | | | 7 | ||
| + | | | Adult heart and skeletal muscle, all fetal tissues tested | ||
| + | |- | ||
| + | | rowspan="2"|CECR3 | ||
| + | | |cDNA | ||
| + | | | 2.4 and 3.7 | ||
| + | | | 2.4 kb—predominantly in lung; 3.7 kg—weakly in all tissues | ||
| + | |} | ||
| + | |||
===pubmed IDs=== | ===pubmed IDs=== | ||
11381032 | 11381032 | ||
| − | === | + | |
| − | cat eye syndrome | + | ==Labs working on this lncRNA== |
| + | * Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada. <ref name="ref1" /> | ||
| + | |||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> Footz, T.K., et al., Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (1088-9051 (Print)). | ||
| + | </ref>(1) | ||
Revision as of 15:36, 24 September 2017
Contents
Annotated Information
Approved Symbol
HDHD5-AS1
Approved Name
HDHD5 antisense RNA 1
Previous Symbols
"CECR4, CECR5-AS1"
Synonyms
NCRNA00017
Chromosome
22q11.1
RefSeq ID
NR_024483
RefSeq(supplied by NCBI)
NR_024482
Characteristics
The distance between HDHD5-AS1 and the adjacent gene CECR5 is at least 99 bp [1].
Conservation
The sequences of exon 1 of HDHD5-AS1 is conserved in human and mouse [1].
Disease
cat eye syndrome
Expression
| Gene name | Probe used | Size of transcript(s) in kb | Tissues showing expression |
|---|---|---|---|
| CECR8 | cDNA 1840041 | 1.4 | Testis |
| CECR4 | cDNA 321686 | 7 | Adult heart and skeletal muscle, all fetal tissues tested |
| CECR3 | cDNA | 2.4 and 3.7 | 2.4 kb—predominantly in lung; 3.7 kg—weakly in all tissues |
pubmed IDs
11381032
Labs working on this lncRNA
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada. [1]
References
<references>
[1](1)
