Difference between revisions of "CLMAT3"

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===Approved Name===
 
===Approved Name===
 
colorectal liver metastasis associated transcript 3
 
colorectal liver metastasis associated transcript 3
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[[File:The CLMAT3 expression levels in 90 paired CRC and normal tissue samples were analyzed via a qRT-PCR assay.png|right|thumb|400px|'''The CLMAT3 expression levels in 90 paired CRC and normal tissue samples were analyzed via a qRT-PCR assay'''<ref name="ref1" />]]
 
===Synonyms===
 
===Synonyms===
 
SPARC-AS1
 
SPARC-AS1
===Chromosome===
 
5q33.1
 
 
===RefSeq(supplied by NCBI)===
 
===RefSeq(supplied by NCBI)===
 
NR_109873
 
NR_109873
[[File:The CLMAT3 expression levels in 90 paired CRC and normal tissue samples were analyzed via a qRT-PCR assay.png|right|thumb|400px|'''The CLMAT3 expression levels in 90 paired CRC and normal tissue samples were analyzed via a qRT-PCR assay'''<ref name="ref1" />]]
 
===pubmed IDs===
 
26050227
 
===Disease===
 
colorectal cancer
 
 
===Characteristics===
 
===Characteristics===
lncRNA-CLMAT3 is located on human chromosome 14 (chr14:101379770-101381326, hg19).
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CLMAT3 is located on human chromosome 14 (chr14:101379770-101381326, hg19) <ref name="ref1" />.
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 +
===Expression===
 +
CLMAT3 is significantly up-regulated in the cancerous tissues comparing with the normal colorectal tissues, and high CLMAT3 expression strongly correlates with liver metastasis and lymph node metastasis, and shorter median overall survival duration <ref name="ref1" />.  
 +
 
 
===Function===
 
===Function===
The patients with tumors displaying high CLMAT3 expression exhibited shorter OS than the patients with tumors displaying low CLMAT3 expression. <ref name="ref1" />
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CLMAT3 over-expression is significantly associated with colorectal liver metastasis and is an independent predictor of poor survival for patients with colorectal cancer, indicating that CLMAT3 may act as an oncogene <ref name="ref1" />.
Colorectal cancer patients displaying high expression levels of CLMAT3 more frequently developed liver metastases than those with low lncRNA-CLMAT3 expression levels, indicating that lncRNA-CLMAT3 may act as an oncogene.<ref name="ref1" />
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===Disease===
 
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* colorectal cancer <ref name="ref1" />
===Expression---
 
The levels of CLMAT3 in the cancerous tissues were 2.26-fold higher than those in the normal colorectal tissues (P<0.05). In addition, CLMAT3 expression was significantly higher in the patients with liver metastasis than in those without liver metastasis and in the patients with lymph node metastasis than in those without lymph node metastasis.<ref name="ref1" />
 
  
 
==Labs working on this lncRNA==
 
==Labs working on this lncRNA==

Latest revision as of 09:58, 7 December 2017

Annotated Information

Approved Symbol

CLMAT3

Approved Name

colorectal liver metastasis associated transcript 3

The CLMAT3 expression levels in 90 paired CRC and normal tissue samples were analyzed via a qRT-PCR assay[1]

Synonyms

SPARC-AS1

RefSeq(supplied by NCBI)

NR_109873

Characteristics

CLMAT3 is located on human chromosome 14 (chr14:101379770-101381326, hg19) [1].

Expression

CLMAT3 is significantly up-regulated in the cancerous tissues comparing with the normal colorectal tissues, and high CLMAT3 expression strongly correlates with liver metastasis and lymph node metastasis, and shorter median overall survival duration [1].

Function

CLMAT3 over-expression is significantly associated with colorectal liver metastasis and is an independent predictor of poor survival for patients with colorectal cancer, indicating that CLMAT3 may act as an oncogene [1].

Disease

  • colorectal cancer [1]

Labs working on this lncRNA

  • Department of Oncological Surgery, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, People's Republic of China.[1]
  • Department of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200000, People's Republic of China.[1]

References

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Ye, L.C., et al., Aberrant expression of long noncoding RNAs in colorectal cancer with liver metastasis. Tumour Biol, 2015. 36(11): p. 8747-54.