Difference between revisions of "NONHSAT017674"
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==Annotated Information==
===Transcriptomic Nomeclature===
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[[Category:Intergenic]] | [[Category:Intergenic]] | ||
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+ | {{lncrnadb| | ||
+ | tID = NONHSAT017674 | | ||
+ | ltID = Beta-globin transcripts| | ||
+ | ann = <tab class=wikitable sep=tab head=top> | ||
+ | Section Description | ||
+ | ID Beta-globin transcripts | ||
+ | Characteristics >1 kb, intergenic RNAs transcribed from the beta-globin locus. | ||
+ | Expression Dynamically expressed during erythroid cell development.<br />Nuclear localised. | ||
+ | Function Intergenic transcripts (or their transcription) are believed to participate in the developmental switch of beta-globin cluster genes, with proposed roles in chromatin remodeling and long-range cis-activation. RNAs may be processed by RNAi machinery. | ||
+ | Conservation N/A | ||
+ | Misc N/A | ||
+ | </tab>| | ||
+ | }} |
Revision as of 12:33, 6 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017674 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
410 nt |
Genomic location |
chr11-:5301819..5302228 |
Exon number |
1 |
Exons |
5301819..5302228 |
Genome context |
|
Sequence |
000001 TTTTACAAGC TCAGCTCCCT CTATCCCTTC CAGCATCCTC ATCTCTGATT AAATAAGCTT CAGTTTTTCC TTAGTTCCTG 000080
000081 TTACATTTCT GTGTGTCTCC ATTAGTGACC TCCCATAGTC CAAGCATGAG CAGTTCTGGC CAGGCCCCTG TCGGGGTCAG 000160 000161 TGCCCCACCC CCGCCTTCTG GTTCCGTGTA ACCTTCTAAG CAAACCTTCT GGCTCAAGCA CAGCAATGCT GAGTCATGAT 000240 000241 GAGTCATGCT GAGGCTTAGG GTGTGTGCCC AGATGTTCTC AGCCTAGAGT GATGACTCCT ATCTGGGTCC CCAGCAGGAT 000320 000321 GCTTACAGGG CAGATGGCAA AAAAAAGGAG AAGCTGACCA CCTGACTAAA ACTCCACCTC AAACGGCATC ATAAAGAAAA 000400 000401 TGGATGCCTG |
Annotation (From lncRNAdb)
Section | Description |
---|---|
ID | Beta-globin transcripts |
Characteristics | >1 kb, intergenic RNAs transcribed from the beta-globin locus. |
Expression | Dynamically expressed during erythroid cell development. Nuclear localised. |
Function | Intergenic transcripts (or their transcription) are believed to participate in the developmental switch of beta-globin cluster genes, with proposed roles in chromatin remodeling and long-range cis-activation. RNAs may be processed by RNAi machinery. |
Conservation | N/A |
Misc | N/A |