Difference between revisions of "ENST00000437795.1"
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==Annotated Information== | ==Annotated Information== | ||
| + | ===Name=== | ||
| + | LINC00570 | ||
| + | |||
| + | ===Characteristics=== | ||
| + | Multiple 2-4 exon isoforms with variation in splicing and TSSs. Isoforms between 380 nt and 1.3kb. Intergenic between ROCK2 and E2F6. In-vitro translation showed no sign of protein product. | ||
| + | |||
| + | ===Function=== | ||
| + | LINC00570 expression appears to stimulate ROCK2 gene expression (in HeLa cells). | ||
| + | |||
| + | ===Expression=== | ||
| + | Expressed in HeLa cells. | ||
| + | |||
| + | ===Conservation=== | ||
| + | Please input conservation information here. | ||
| + | |||
| + | ===Misc=== | ||
| + | Please input misc information here. | ||
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===Transcriptomic Nomeclature=== | ===Transcriptomic Nomeclature=== | ||
Please input transcriptomic nomeclature information here. | Please input transcriptomic nomeclature information here. | ||
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===Regulation=== | ===Regulation=== | ||
Please input regulation information here. | Please input regulation information here. | ||
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===Allelic Information and Variation=== | ===Allelic Information and Variation=== | ||
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}} | }} | ||
[[Category:Intergenic]] | [[Category:Intergenic]] | ||
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Revision as of 02:20, 11 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Name
LINC00570
Characteristics
Multiple 2-4 exon isoforms with variation in splicing and TSSs. Isoforms between 380 nt and 1.3kb. Intergenic between ROCK2 and E2F6. In-vitro translation showed no sign of protein product.
Function
LINC00570 expression appears to stimulate ROCK2 gene expression (in HeLa cells).
Expression
Expressed in HeLa cells.
Conservation
Please input conservation information here.
Misc
Please input misc information here.
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Regulation
Please input regulation information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
ENST00000437795.1 |
| Source |
Gencode19 |
| Same with |
lnc-GREB1-4:2,NONHSAT069165 |
| Classification |
intergenic |
| Length |
490 nt |
| Genomic location |
chr2+:11539128..11542234 |
| Exon number |
4 |
| Exons |
11539128..11539344,11539798..11539900,11540498..11540583,11542151..11542234 |
| Genome context |
|
| Sequence |
000001 AGAGCCCCAG AGGCAGAGCT GCCCAAGGCT TTGGGAGCCC ACCTCTTGCA TCACTGTGCC CTGGATGTGA GACGTGGAAT 000080
000081 CAAGGAGATT ATTTTGGAGC TTTAAGACGT AATGGCACCC TGCTGGGTTT CAGACTTGAG TGGAGCCTGC AGCCTTTCTT 000160 000161 TCGGCCGGTT TCTCCCTTTT GGAACGGGAG TATTTACCCA ATGCCTGTAC CCCCATGACG TGCCCGTGTC CCCTTCCTCC 000240 000241 ACCACAAGAT TGTAAGTTTT CTGGAGCCTC CCCAGAAGCT GAGAAGAAGC TGCTATGCTT CCTGTTCAGC CTGCAGAACC 000320 000321 GCCACTTCCA GCATCGATGG TGTCAGGTCA GGTCCTCTGG GTAGAAGAAA TGGAGTCAGT TAGGAGTGCT GGAGACTGAG 000400 000401 TAAGAGGTGG CAGCTGAGGC TTACTACCCC AGGAAAGGGA TGCCACCAGA GAAGGCAGAC AACCAAGATG GCGACTCTCA 000480 000481 ATTTTTGAGC |
