Difference between revisions of "ENST00000453100.1"
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==Annotated Information== | ==Annotated Information== | ||
| + | ===Name=== | ||
| + | LINC00570 | ||
| + | |||
| + | ===Characteristics=== | ||
| + | Multiple 2-4 exon isoforms with variation in splicing and TSSs. Isoforms between 380 nt and 1.3kb. Intergenic between ROCK2 and E2F6. In-vitro translation showed no sign of protein product. | ||
| + | |||
| + | ===Function=== | ||
| + | LINC00570 expression appears to stimulate ROCK2 gene expression (in HeLa cells). | ||
| + | |||
| + | ===Expression=== | ||
| + | Expressed in HeLa cells. | ||
| + | |||
| + | ===Conservation=== | ||
| + | Please input conservation information here. | ||
| + | |||
| + | ===Misc=== | ||
| + | Please input misc information here. | ||
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===Transcriptomic Nomeclature=== | ===Transcriptomic Nomeclature=== | ||
Please input transcriptomic nomeclature information here. | Please input transcriptomic nomeclature information here. | ||
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===Regulation=== | ===Regulation=== | ||
Please input regulation information here. | Please input regulation information here. | ||
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===Allelic Information and Variation=== | ===Allelic Information and Variation=== | ||
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}} | }} | ||
[[Category:Intergenic]] | [[Category:Intergenic]] | ||
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Revision as of 02:22, 11 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Name
LINC00570
Characteristics
Multiple 2-4 exon isoforms with variation in splicing and TSSs. Isoforms between 380 nt and 1.3kb. Intergenic between ROCK2 and E2F6. In-vitro translation showed no sign of protein product.
Function
LINC00570 expression appears to stimulate ROCK2 gene expression (in HeLa cells).
Expression
Expressed in HeLa cells.
Conservation
Please input conservation information here.
Misc
Please input misc information here.
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Regulation
Please input regulation information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
ENST00000453100.1 |
| Source |
Gencode19 |
| Same with |
lnc-GREB1-4:3,NONHSAT069166 |
| Classification |
intergenic |
| Length |
399 nt |
| Genomic location |
chr2+:11539180..11542384 |
| Exon number |
2 |
| Exons |
11539180..11539344,11542151..11542384 |
| Genome context |
|
| Sequence |
000001 ACTGTGCCCT GGATGTGAGA CGTGGAATCA AGGAGATTAT TTTGGAGCTT TAAGACGTAA TGGCACCCTG CTGGGTTTCA 000080
000081 GACTTGAGTG GAGCCTGCAG CCTTTCTTTC GGCCGGTTTC TCCCTTTTGG AACGGGAGTA TTTACCCAAT GCCTGTACCC 000160 000161 CCATGGTGGC AGCTGAGGCT TACTACCCCA GGAAAGGGAT GCCACCAGAG AAGGCAGACA ACCAAGATGG CGACTCTCAA 000240 000241 TTTTTGAGCT CCTAATTTTC TCATGTCAGA CATAAGAAAA AAAAATATTT TTTAAAGAAA AAGCTTTAGG TTGCAAAAAT 000320 000321 CTAGGCCTTT CAACTTTAAA ATCCTATTCT TGCAAGCCTT GGAGAATAAA GCTTATGCAT AAACAGTAGA TTTGGAAAC |
