Difference between revisions of "Lnc-CMPK2-13:5"

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sequence = <dnaseq>CTAGAAGCCTTCTGGGTCACTCATAAACCAAAGAGAAAATAAGGCAGCACATATTTCCCATAGAAATGTGGAATGTAAGAAAGGCACATAAAGCAATCCAAGTTGCCTGCAGATATCCACAGCCTACTTCAGTCTCAGTAATGCTCTTTTAACCTGGTGCATCAGTTTAAGGGAAGACATGAGATCATGGGTTTAAGTGAGGCTTCATCATGCCAAGACAACGTGATCAGTTATTCCCAACCTATATAACTCACATACACTGGAGGAAATATCTTCATGGAATTAAAACCACATGGAGTAACATTTCACGTAAGCAGAATTCAGGAATGATTTCAGTAATTCCATCCCAAACACACACAGGCAAAGGGAGTGAAGATTTCTTCAGCAACATGGTGGCAGAAAGATCATGAAAAGATCTAGGCCAGTCCAAGCTCACTGCAGTTAAATCTTCAGTCTCCAGCACTGCACTTGGGAAAGCGTCAAGGAGTTGAATGTATATGTAATTGGAGTGCCAGAAGAAGAGAACTGAGAGAGAGGGGCAGAACAGCTCATGAGGGGGAAAACCCACTACATACAAACAAGAATACTGCAGACTCCTCATCAGAATCTATGCTACCTGTAAAGGCTTGTAAAAGCACAGAGCTGCTCTCACCATGCAGCCAAAGAAGAAATGAGGATATCGGTCCTATAACTGCAAGGAACTGAATGCTGCCAACCACCTGAACGGACTTGGGCTACTGAGAAGAAGCTATTCTAGCAAAGCTGGAGGAATTCCACCAGACTGACAGAACAACACAAATAAGTCCATGCCTGACGCACAGCAGGGGCTCAAGGCAAGTTTGTGGACTCGAAGCCCTGTTAGAATGGATGGAATTTGGTCTTATGAAGC</dnaseq>|
 
sequence = <dnaseq>CTAGAAGCCTTCTGGGTCACTCATAAACCAAAGAGAAAATAAGGCAGCACATATTTCCCATAGAAATGTGGAATGTAAGAAAGGCACATAAAGCAATCCAAGTTGCCTGCAGATATCCACAGCCTACTTCAGTCTCAGTAATGCTCTTTTAACCTGGTGCATCAGTTTAAGGGAAGACATGAGATCATGGGTTTAAGTGAGGCTTCATCATGCCAAGACAACGTGATCAGTTATTCCCAACCTATATAACTCACATACACTGGAGGAAATATCTTCATGGAATTAAAACCACATGGAGTAACATTTCACGTAAGCAGAATTCAGGAATGATTTCAGTAATTCCATCCCAAACACACACAGGCAAAGGGAGTGAAGATTTCTTCAGCAACATGGTGGCAGAAAGATCATGAAAAGATCTAGGCCAGTCCAAGCTCACTGCAGTTAAATCTTCAGTCTCCAGCACTGCACTTGGGAAAGCGTCAAGGAGTTGAATGTATATGTAATTGGAGTGCCAGAAGAAGAGAACTGAGAGAGAGGGGCAGAACAGCTCATGAGGGGGAAAACCCACTACATACAAACAAGAATACTGCAGACTCCTCATCAGAATCTATGCTACCTGTAAAGGCTTGTAAAAGCACAGAGCTGCTCTCACCATGCAGCCAAAGAAGAAATGAGGATATCGGTCCTATAACTGCAAGGAACTGAATGCTGCCAACCACCTGAACGGACTTGGGCTACTGAGAAGAAGCTATTCTAGCAAAGCTGGAGGAATTCCACCAGACTGACAGAACAACACAAATAAGTCCATGCCTGACGCACAGCAGGGGCTCAAGGCAAGTTTGTGGACTCGAAGCCCTGTTAGAATGGATGGAATTTGGTCTTATGAAGC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-CMPK2-13]]
+
[[Category:Intergenic]][[Category:lnc-CMPK2-13]][[Category:NONHSAG026881]]

Revision as of 06:06, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-CMPK2-13:5

Source

LNCipedia2.1

Same with

NONHSAT068808

Classification

intergenic

Length

889 nt

Genomic location

chr2-:5758527..5831361

Exon number

7

Exons

5758527..5758673,5761336..5761466,5774263..5774448,5775548..5775742,5789971..5790043,5824558..5824671,5831319..5831361

Genome context

Sequence
000001 CTAGAAGCCT TCTGGGTCAC TCATAAACCA AAGAGAAAAT AAGGCAGCAC ATATTTCCCA TAGAAATGTG GAATGTAAGA 000080
000081 AAGGCACATA AAGCAATCCA AGTTGCCTGC AGATATCCAC AGCCTACTTC AGTCTCAGTA ATGCTCTTTT AACCTGGTGC 000160
000161 ATCAGTTTAA GGGAAGACAT GAGATCATGG GTTTAAGTGA GGCTTCATCA TGCCAAGACA ACGTGATCAG TTATTCCCAA 000240
000241 CCTATATAAC TCACATACAC TGGAGGAAAT ATCTTCATGG AATTAAAACC ACATGGAGTA ACATTTCACG TAAGCAGAAT 000320
000321 TCAGGAATGA TTTCAGTAAT TCCATCCCAA ACACACACAG GCAAAGGGAG TGAAGATTTC TTCAGCAACA TGGTGGCAGA 000400
000401 AAGATCATGA AAAGATCTAG GCCAGTCCAA GCTCACTGCA GTTAAATCTT CAGTCTCCAG CACTGCACTT GGGAAAGCGT 000480
000481 CAAGGAGTTG AATGTATATG TAATTGGAGT GCCAGAAGAA GAGAACTGAG AGAGAGGGGC AGAACAGCTC ATGAGGGGGA 000560
000561 AAACCCACTA CATACAAACA AGAATACTGC AGACTCCTCA TCAGAATCTA TGCTACCTGT AAAGGCTTGT AAAAGCACAG 000640
000641 AGCTGCTCTC ACCATGCAGC CAAAGAAGAA ATGAGGATAT CGGTCCTATA ACTGCAAGGA ACTGAATGCT GCCAACCACC 000720
000721 TGAACGGACT TGGGCTACTG AGAAGAAGCT ATTCTAGCAA AGCTGGAGGA ATTCCACCAG ACTGACAGAA CAACACAAAT 000800
000801 AAGTCCATGC CTGACGCACA GCAGGGGCTC AAGGCAAGTT TGTGGACTCG AAGCCCTGTT AGAATGGATG GAATTTGGTC 000880
000881 TTATGAAGC
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