Difference between revisions of "NONHSAT024759"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>CAACTTTGCTTTCAGATAACCCTCCTTCCTCCACCTCACAAAAACTCACAAGCTGCAACCCTTCTGATGTCCACTCCCACACAAACCAGCTTCAGGCCTTTTTCAAGATGTGACTGGAGTGATTTGCACCCGGATGCCTAGACTCGCCATCTGCTCAAAGACTGCTCAGAAAGCCCTCCCATGCATTCCCCTGCTGCATACCAGCCCACTCTGCCTGCAGCTGCTGTCTGCAGGACTTCATATCTATGCCACACTGTGTAAAAGCTGTGCTTCAAGAAATCACAAAAACATTTTCCTGCACCTACTACACAGCCTGAGTGCGGCATAAGTTGACCTTGCTTGCTAAGAAATGGGGCAAGAAATGCTTTTTTGTGTGTGTCATGTCTGTTTGTTTTTCAATTAAGAGAGGAAAGCATTAGGCAGATGGAATGTACATGTGAGGATGAGGAGACAGAAAACAAGTAGCCCTTTCCATCAAGATAGAGGGTTTTCTGGGGTTGCTGGCTATTGAATGTCACTCCTGATTTCTCTTTCCAAGGCACTGTACCACCAGCCTACTGAGATTGTGTGGGAGCTTTCATGGGGGTTGTATTTCACTGATGAAAATAAATTTTTTGCATAATGTG</dnaseq>| | sequence = <dnaseq>CAACTTTGCTTTCAGATAACCCTCCTTCCTCCACCTCACAAAAACTCACAAGCTGCAACCCTTCTGATGTCCACTCCCACACAAACCAGCTTCAGGCCTTTTTCAAGATGTGACTGGAGTGATTTGCACCCGGATGCCTAGACTCGCCATCTGCTCAAAGACTGCTCAGAAAGCCCTCCCATGCATTCCCCTGCTGCATACCAGCCCACTCTGCCTGCAGCTGCTGTCTGCAGGACTTCATATCTATGCCACACTGTGTAAAAGCTGTGCTTCAAGAAATCACAAAAACATTTTCCTGCACCTACTACACAGCCTGAGTGCGGCATAAGTTGACCTTGCTTGCTAAGAAATGGGGCAAGAAATGCTTTTTTGTGTGTGTCATGTCTGTTTGTTTTTCAATTAAGAGAGGAAAGCATTAGGCAGATGGAATGTACATGTGAGGATGAGGAGACAGAAAACAAGTAGCCCTTTCCATCAAGATAGAGGGTTTTCTGGGGTTGCTGGCTATTGAATGTCACTCCTGATTTCTCTTTCCAAGGCACTGTACCACCAGCCTACTGAGATTGTGTGGGAGCTTTCATGGGGGTTGTATTTCACTGATGAAAATAAATTTTTTGCATAATGTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG009876]] |
Revision as of 06:32, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT024759 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
626 nt |
| Genomic location |
chr11-:121898991..121934975 |
| Exon number |
2 |
| Exons |
121898991..121899553,121934888..121934975 |
| Genome context |
|
| Sequence |
000001 CAACTTTGCT TTCAGATAAC CCTCCTTCCT CCACCTCACA AAAACTCACA AGCTGCAACC CTTCTGATGT CCACTCCCAC 000080
000081 ACAAACCAGC TTCAGGCCTT TTTCAAGATG TGACTGGAGT GATTTGCACC CGGATGCCTA GACTCGCCAT CTGCTCAAAG 000160 000161 ACTGCTCAGA AAGCCCTCCC ATGCATTCCC CTGCTGCATA CCAGCCCACT CTGCCTGCAG CTGCTGTCTG CAGGACTTCA 000240 000241 TATCTATGCC ACACTGTGTA AAAGCTGTGC TTCAAGAAAT CACAAAAACA TTTTCCTGCA CCTACTACAC AGCCTGAGTG 000320 000321 CGGCATAAGT TGACCTTGCT TGCTAAGAAA TGGGGCAAGA AATGCTTTTT TGTGTGTGTC ATGTCTGTTT GTTTTTCAAT 000400 000401 TAAGAGAGGA AAGCATTAGG CAGATGGAAT GTACATGTGA GGATGAGGAG ACAGAAAACA AGTAGCCCTT TCCATCAAGA 000480 000481 TAGAGGGTTT TCTGGGGTTG CTGGCTATTG AATGTCACTC CTGATTTCTC TTTCCAAGGC ACTGTACCAC CAGCCTACTG 000560 000561 AGATTGTGTG GGAGCTTTCA TGGGGGTTGT ATTTCACTGA TGAAAATAAA TTTTTTGCAT AATGTG |
Predicted Small Protein
| Name | NONHSAT024759_smProtein_245:316 |
| Length | 24 |
| Molecular weight | 2635.0855 |
| Aromaticity | 0.130434782609 |
| Instability index | 90.447826087 |
| Isoelectric point | 7.81353759766 |
| Runs | 5 |
| Runs residual | 0.0103519668737 |
| Runs probability | 0.0380321497969 |
| Amino acid sequence | MPHCVKAVLQEITKTFSCTYYTA |
| Secondary structure | LLHHHHHHHHHHHHHLEEEEELL |
| PRMN | - |
| PiMo | - |
