Difference between revisions of "ENST00000579174.1"

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sequence = <dnaseq>CATTCACCACCGCGTGACGCGGCGCCGGGTCGCCGCCGCAGATTCGACACAAAACCCGGAAGGACCCCGCCGAAGGTTTTCTCCGGTTCGGGAGAGAGACGGAGTCCCGCTCTGTCACGCAGGCTGCCAGGCTGGCGTACAGTGGCGCAATCTCAGCTCGCTGCAACCTCCACCTCCTGGGTTCAAGCGATTTTCTTGCCTCTGCCTCCTGAGTAGCTGGGATTACTGGCACACACCACCATGCACAGGGAGATATGAGACATCAATCAATATATGTAAGATGTACATCAGTTTCGTCTGGAAAGATGGGACAACATGAAGCAGGGAGGGGGCTCCCTGGTGACAGTTCCTTGTTCAAAATGCCAAGAACCTGGATGACTCATAGTCAAGACCCTCCACCAGTAACATATATTGGCGAGCCAGCCAGGAGCGAATGGGTCTCATGAGATCTGATGGTTTTGAAAATGGGAGTTGCCCTGCACAAGCTCTCCTTTTGCCTGCTGCCATCCACATAAGATGTGATTTGCTCTTCCTTGCCTTCCACCATGATTGTGAGGCCTTCCCAGCATGTGGAAATGGTCCAGCCTGCAATAACTGAAGCCCCCAGACCTGGAACCTGAAGATCCCATCAGCCACTAAACCTGTGAACCTGTAGAAGACCTGAAGTACCTGTTTAAAAGGCAGCCAAAAGATAAGTAAATTCCTATCAACTTTCCTTGGTGTCCTTCTTGTATATTTACTGTAAGCTGGATATA</dnaseq>|
 
sequence = <dnaseq>CATTCACCACCGCGTGACGCGGCGCCGGGTCGCCGCCGCAGATTCGACACAAAACCCGGAAGGACCCCGCCGAAGGTTTTCTCCGGTTCGGGAGAGAGACGGAGTCCCGCTCTGTCACGCAGGCTGCCAGGCTGGCGTACAGTGGCGCAATCTCAGCTCGCTGCAACCTCCACCTCCTGGGTTCAAGCGATTTTCTTGCCTCTGCCTCCTGAGTAGCTGGGATTACTGGCACACACCACCATGCACAGGGAGATATGAGACATCAATCAATATATGTAAGATGTACATCAGTTTCGTCTGGAAAGATGGGACAACATGAAGCAGGGAGGGGGCTCCCTGGTGACAGTTCCTTGTTCAAAATGCCAAGAACCTGGATGACTCATAGTCAAGACCCTCCACCAGTAACATATATTGGCGAGCCAGCCAGGAGCGAATGGGTCTCATGAGATCTGATGGTTTTGAAAATGGGAGTTGCCCTGCACAAGCTCTCCTTTTGCCTGCTGCCATCCACATAAGATGTGATTTGCTCTTCCTTGCCTTCCACCATGATTGTGAGGCCTTCCCAGCATGTGGAAATGGTCCAGCCTGCAATAACTGAAGCCCCCAGACCTGGAACCTGAAGATCCCATCAGCCACTAAACCTGTGAACCTGTAGAAGACCTGAAGTACCTGTTTAAAAGGCAGCCAAAAGATAAGTAAATTCCTATCAACTTTCCTTGGTGTCCTTCTTGTATATTTACTGTAAGCTGGATATA</dnaseq>|
 
}}
 
}}
[[Category:Antisense]][[Category:lnc-GGCT-1]]
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[[Category:Antisense]][[Category:lnc-GGCT-1]][[Category:NONHSAG047260]]

Revision as of 07:27, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000579174.1

Source

Gencode19

Same with

lnc-GGCT-1:2,NONHSAT119913

Classification

antisense

Length

755 nt

Genomic location

chr7-:30614320..30634424

Exon number

6

Exons

30614320..30614497,30616180..30616326,30618847..30618930,30624327..30624424,30624946..30625095,30634327..30634424

Genome context

Sequence
000001 CATTCACCAC CGCGTGACGC GGCGCCGGGT CGCCGCCGCA GATTCGACAC AAAACCCGGA AGGACCCCGC CGAAGGTTTT 000080
000081 CTCCGGTTCG GGAGAGAGAC GGAGTCCCGC TCTGTCACGC AGGCTGCCAG GCTGGCGTAC AGTGGCGCAA TCTCAGCTCG 000160
000161 CTGCAACCTC CACCTCCTGG GTTCAAGCGA TTTTCTTGCC TCTGCCTCCT GAGTAGCTGG GATTACTGGC ACACACCACC 000240
000241 ATGCACAGGG AGATATGAGA CATCAATCAA TATATGTAAG ATGTACATCA GTTTCGTCTG GAAAGATGGG ACAACATGAA 000320
000321 GCAGGGAGGG GGCTCCCTGG TGACAGTTCC TTGTTCAAAA TGCCAAGAAC CTGGATGACT CATAGTCAAG ACCCTCCACC 000400
000401 AGTAACATAT ATTGGCGAGC CAGCCAGGAG CGAATGGGTC TCATGAGATC TGATGGTTTT GAAAATGGGA GTTGCCCTGC 000480
000481 ACAAGCTCTC CTTTTGCCTG CTGCCATCCA CATAAGATGT GATTTGCTCT TCCTTGCCTT CCACCATGAT TGTGAGGCCT 000560
000561 TCCCAGCATG TGGAAATGGT CCAGCCTGCA ATAACTGAAG CCCCCAGACC TGGAACCTGA AGATCCCATC AGCCACTAAA 000640
000641 CCTGTGAACC TGTAGAAGAC CTGAAGTACC TGTTTAAAAG GCAGCCAAAA GATAAGTAAA TTCCTATCAA CTTTCCTTGG 000720
000721 TGTCCTTCTT GTATATTTAC TGTAAGCTGG ATATA
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