Difference between revisions of "NONHSAT055435"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ATTTTTCTCATAACTGTTTATTTATGGACTTTGTAAAGTGAATTAACCTGAAGTTAAATTTAAAATCTTAACTTCCTTTTCCTATTCATCTTCAGATTATGGATTGGATATGTCTACTTCTGGATGCAAATTTTACTGTTGTTGTAATGATGCCAGAAGCAAAGAGGCTACTGATAAATCTTTACAAGCTTGTAAAATCTCAGATATCTGTTTATTCTGAGCTCAACAAGATTGAAGTAAGTTTTCGGGAGCTACAGAAATTAAATCAAGAAAAGAATAATAGAGGATTATATTCAATTGAAGTGCTGGAGCTCTTCTGATATTATCAATTCTCCTTCATAGACATTTTATAAAGCTCTTTTATGTGAACTCTTGCTTCATCCAGGCAAGAACGGTGTTTTGTTTGCGACCATCTCAGTGTCAAGAGAAACGTGTCAGTGAGTACCTGGACCATCACTTAACTGATGCTCCGGGGTAGGACTGCAGGTTTCACATGAACCTGTTCTAGGCTGTGGACATTGGTGTGGAGAGGTTCTGCAATTTTTTAAAAATATGTAACTGGGTTGATTTTAAGTAAAATTATTTGTGTATTGATAAAAGTCTAATTTCTTA</dnaseq>| | sequence = <dnaseq>ATTTTTCTCATAACTGTTTATTTATGGACTTTGTAAAGTGAATTAACCTGAAGTTAAATTTAAAATCTTAACTTCCTTTTCCTATTCATCTTCAGATTATGGATTGGATATGTCTACTTCTGGATGCAAATTTTACTGTTGTTGTAATGATGCCAGAAGCAAAGAGGCTACTGATAAATCTTTACAAGCTTGTAAAATCTCAGATATCTGTTTATTCTGAGCTCAACAAGATTGAAGTAAGTTTTCGGGAGCTACAGAAATTAAATCAAGAAAAGAATAATAGAGGATTATATTCAATTGAAGTGCTGGAGCTCTTCTGATATTATCAATTCTCCTTCATAGACATTTTATAAAGCTCTTTTATGTGAACTCTTGCTTCATCCAGGCAAGAACGGTGTTTTGTTTGCGACCATCTCAGTGTCAAGAGAAACGTGTCAGTGAGTACCTGGACCATCACTTAACTGATGCTCCGGGGTAGGACTGCAGGTTTCACATGAACCTGTTCTAGGCTGTGGACATTGGTGTGGAGAGGTTCTGCAATTTTTTAAAAATATGTAACTGGGTTGATTTTAAGTAAAATTATTTGTGTATTGATAAAAGTCTAATTTCTTA</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG022570]] |
Revision as of 07:51, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT055435 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
612 nt |
| Genomic location |
chr17+:65739500..65740267 |
| Exon number |
2 |
| Exons |
65739500..65739702,65739859..65740267 |
| Genome context |
|
| Sequence |
000001 ATTTTTCTCA TAACTGTTTA TTTATGGACT TTGTAAAGTG AATTAACCTG AAGTTAAATT TAAAATCTTA ACTTCCTTTT 000080
000081 CCTATTCATC TTCAGATTAT GGATTGGATA TGTCTACTTC TGGATGCAAA TTTTACTGTT GTTGTAATGA TGCCAGAAGC 000160 000161 AAAGAGGCTA CTGATAAATC TTTACAAGCT TGTAAAATCT CAGATATCTG TTTATTCTGA GCTCAACAAG ATTGAAGTAA 000240 000241 GTTTTCGGGA GCTACAGAAA TTAAATCAAG AAAAGAATAA TAGAGGATTA TATTCAATTG AAGTGCTGGA GCTCTTCTGA 000320 000321 TATTATCAAT TCTCCTTCAT AGACATTTTA TAAAGCTCTT TTATGTGAAC TCTTGCTTCA TCCAGGCAAG AACGGTGTTT 000400 000401 TGTTTGCGAC CATCTCAGTG TCAAGAGAAA CGTGTCAGTG AGTACCTGGA CCATCACTTA ACTGATGCTC CGGGGTAGGA 000480 000481 CTGCAGGTTT CACATGAACC TGTTCTAGGC TGTGGACATT GGTGTGGAGA GGTTCTGCAA TTTTTTAAAA ATATGTAACT 000560 000561 GGGTTGATTT TAAGTAAAAT TATTTGTGTA TTGATAAAAG TCTAATTTCT TA |
Predicted Small Protein
| Name | NONHSAT055435_smProtein_98:319 |
| Length | 74 |
| Molecular weight | 8636.1305 |
| Aromaticity | 0.0958904109589 |
| Instability index | 43.4643835616 |
| Isoelectric point | 6.19793701172 |
| Runs | 14 |
| Runs residual | 0.0476358815731 |
| Runs probability | 0.032957327075 |
| Amino acid sequence | MDWICLLLDANFTVVVMMPEAKRLLINLYKLVKSQISVYSELNKIEVSFRELQKLNQEKN NRGLYSIEVLELF |
| Secondary structure | LLEEEELLLLLLEEEEELHHHHHHHHHHHHHHHHHHHHHHHHLLEEELHHHHHHHHHHHL LLLLEEEEHHHHL |
| PRMN | - |
| PiMo | - |
