Difference between revisions of "NONHSAT056456"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGAAGAGGACGGACCTAAGATGGCGGCCTCCAGGGGGCTGGGAATAGCCGCTCATGTCGGCTAACGGAGCGGTGTGGGGCCGCGTGCGAAGCCGCCTCCGCGCCTTCCCCGAGCGGCTGGCCGCCTGCGGGGCCGAGGCCGCGGCGTACGGCAGGTGCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCTGAGTAAGGACTTCTGCGCGCGGGAGTTCGAGGCCCTGCGGAGCTGCTTCGCCGCTGCGGTAGGTGGGCGCGGGCCCCTTCCCCCCTTCCCAGCCCTTCCCCTCCAAGAGCCAGCGGGCCCCGGCTTTCCTTTGCTTTCCCGTTGGTTCAAGGTTTGAGCGCCTGCCGCGTGCTTTAGACGCCGGCTGACAAAATCACCGAGCCATCGACGAGCCCGCGAAACCTCGGCCGTCCTGGGCTTGTCCCTGCATGTTTGTAAAGCGGGACTGGCACCAACCTCAGAAAGGATGGGAGATGTGTGCAAAAAAGCGCCTTGTAAAACGCGCCAAGAAGACGCTGGAGGGAGGCTGTTAGGAGGGACTCTGAGCTTCACACCTGTCTGCTGCCATGGGTGCAGAGCCCTAGTCCTGATGGCCCCTGGTGGCACATATCGAATGCCTAGGGCAGAAAGGAAGTGGGAATGGCGAAGATGTGACATTCCTCGGTGTTAGATCCTGTTTTTTCTTAACAAGTTGAGGCGTGGGTAGAGCAGGAATTGGTTTTCCAGCATTG</dnaseq>| | sequence = <dnaseq>GGAAGAGGACGGACCTAAGATGGCGGCCTCCAGGGGGCTGGGAATAGCCGCTCATGTCGGCTAACGGAGCGGTGTGGGGCCGCGTGCGAAGCCGCCTCCGCGCCTTCCCCGAGCGGCTGGCCGCCTGCGGGGCCGAGGCCGCGGCGTACGGCAGGTGCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCTGAGTAAGGACTTCTGCGCGCGGGAGTTCGAGGCCCTGCGGAGCTGCTTCGCCGCTGCGGTAGGTGGGCGCGGGCCCCTTCCCCCCTTCCCAGCCCTTCCCCTCCAAGAGCCAGCGGGCCCCGGCTTTCCTTTGCTTTCCCGTTGGTTCAAGGTTTGAGCGCCTGCCGCGTGCTTTAGACGCCGGCTGACAAAATCACCGAGCCATCGACGAGCCCGCGAAACCTCGGCCGTCCTGGGCTTGTCCCTGCATGTTTGTAAAGCGGGACTGGCACCAACCTCAGAAAGGATGGGAGATGTGTGCAAAAAAGCGCCTTGTAAAACGCGCCAAGAAGACGCTGGAGGGAGGCTGTTAGGAGGGACTCTGAGCTTCACACCTGTCTGCTGCCATGGGTGCAGAGCCCTAGTCCTGATGGCCCCTGGTGGCACATATCGAATGCCTAGGGCAGAAAGGAAGTGGGAATGGCGAAGATGTGACATTCCTCGGTGTTAGATCCTGTTTTTTCTTAACAAGTTGAGGCGTGGGTAGAGCAGGAATTGGTTTTCCAGCATTG</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG022986]] |
Revision as of 08:21, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056456 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
741 nt |
Genomic location |
chr17+:79213111..79215014 |
Exon number |
3 |
Exons |
79213111..79213247,79213368..79213743,79214787..79215014 |
Genome context |
|
Sequence |
000001 GGAAGAGGAC GGACCTAAGA TGGCGGCCTC CAGGGGGCTG GGAATAGCCG CTCATGTCGG CTAACGGAGC GGTGTGGGGC 000080
000081 CGCGTGCGAA GCCGCCTCCG CGCCTTCCCC GAGCGGCTGG CCGCCTGCGG GGCCGAGGCC GCGGCGTACG GCAGGTGCGT 000160 000161 GCAGGCCTCC ACGGCCCCGG GCGGCCGCCT GAGTAAGGAC TTCTGCGCGC GGGAGTTCGA GGCCCTGCGG AGCTGCTTCG 000240 000241 CCGCTGCGGT AGGTGGGCGC GGGCCCCTTC CCCCCTTCCC AGCCCTTCCC CTCCAAGAGC CAGCGGGCCC CGGCTTTCCT 000320 000321 TTGCTTTCCC GTTGGTTCAA GGTTTGAGCG CCTGCCGCGT GCTTTAGACG CCGGCTGACA AAATCACCGA GCCATCGACG 000400 000401 AGCCCGCGAA ACCTCGGCCG TCCTGGGCTT GTCCCTGCAT GTTTGTAAAG CGGGACTGGC ACCAACCTCA GAAAGGATGG 000480 000481 GAGATGTGTG CAAAAAAGCG CCTTGTAAAA CGCGCCAAGA AGACGCTGGA GGGAGGCTGT TAGGAGGGAC TCTGAGCTTC 000560 000561 ACACCTGTCT GCTGCCATGG GTGCAGAGCC CTAGTCCTGA TGGCCCCTGG TGGCACATAT CGAATGCCTA GGGCAGAAAG 000640 000641 GAAGTGGGAA TGGCGAAGAT GTGACATTCC TCGGTGTTAG ATCCTGTTTT TTCTTAACAA GTTGAGGCGT GGGTAGAGCA 000720 000721 GGAATTGGTT TTCCAGCATT G |
Predicted Small Protein
Name | NONHSAT056456_smProtein_53:346 |
Length | 98 |
Molecular weight | 10248.7578 |
Aromaticity | 0.103092783505 |
Instability index | 65.7742268041 |
Isoelectric point | 10.2909545898 |
Runs | 10 |
Runs residual | 0.0284459717449 |
Runs probability | 0.0119413531178 |
Amino acid sequence | MSANGAVWGRVRSRLRAFPERLAACGAEAAAYGRCVQASTAPGGRLSKDFCAREFEALRS CFAAAVGGRGPLPPFPALPLQEPAGPGFPLLSRWFKV |
Secondary structure | LLLLLLEEHHHHHHHHHHHHHHHHHHHHHHHHLLEEELLLLLLLLLLHHHHHHHHHHHHH HHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |