Difference between revisions of "Lnc-HPCAL1-1:13"
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sequence = <dnaseq>CCAGCAGCGTGGCAGCCACCTGTGGGCTGTCCCAGAGAAACCCACTGACCACCAAGGGCAAGCAGCTAGTGCTGGGGAGGCTGCGAAGCCAAGAGAGGGAGAGGGAGATGGAGACAGAGAGGAGGGACAGGAGCCAGCTCTCCCCTCCGCCCATCCTCCAGGCTCCCACCAGCACTTCCCAGTCAGAAGCCTGTTGACAAGAGATCCCGTTCCTTGCCCAGGTGTTGGCCCAGCTCTCTTCATGGTTCCAAGAAGGCTGCCCCAGGAAGGCTTGTGGACAGAGGGAGAAGCATCTCTTCCTCTATGTCTCTTTTTATCTAAGAAACCAGTTTGACCAGCATCCTTCCCCTCGGCTCCCCAGGAGGAATGCACGGATCCCTTCGCCTTCCCCCATCCCTCCATGGTTGACTAAACCCACTAGGATCCACTCTTTTGCGTGGAAATGGGTTCAGGCCTCCCACGAAGAGCATGAAGATGCCCTCTGTTATGGGTTACATTATGTCCCCTGCCCCCGAGACCGTATGTTGAGTCCTAACCCTAGTATTGCAGAACGTGAATTTATTAGGAGATAGGGTCTTTATGGAGGTCATTAAGTTAAATGAGGGTGTTAGGGTGGGCTGGTGTCCTGATATAAAGGGGAAATTTGGGGCTGGGTGTAGTGGCTCACACATATAATCCCAGTGCCTCGAGAGGCCAAGGCAGGAGGATTGCTTGAGGGCAGGAGTTCAAGACCAGCTTGGGTAACATAGGGAGACCGGTATCTATAAAAAAAATTAAAAACAAAAAAATTAGCCGAGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAGTCCAGGAATTTGAGGCTGCAGTGAGCCATAAAAAGATGGGGGACGATGGAGACGCACAGGGAAAACACCTTGTGAATGCGGCAGAGATAAGGGTGATGCCTCTACACACCGAGGAACTTCAGAGACAACCAGTAAGTCACTGGGAGCTCGGGGAAGGCACAGCGCAGATGCTCGCTGCCCTCAGAGGGAAGCCAGCCCGCCAACCCCTTGATCTCAGACCTCTGGCCCCTGGAACTGTGAGATGATAGATTTCTGTCGTTTAAGCACAGTGGTGCTGTGTTATAGCAGCCCTAGGGAACCATCCACTATCAGAACAAAAGCAGGGCTGGACTGCTAGAAGAAAGGAGAGGAGAATGGCAGAGGATACCCACCTTGGGGCTGAATCTGAGATCACTCCAGGGCTCCCCAGGTTGTTTTGAAGAATGGAGATGGATTTGTGCAGGGCTCACTGTAGAAGCTCAGTGCAGCATGCGACGCTTATAAGGCTGCAATCCCCAGAGCTCAGTCCCTGAAGAGCGCTGCATTCACAGACATCAGCCAGCAGACAAACCAGTACCTATTGTCCCTGACCCCCAGAATCCAGCAGACATATAAAAGATGGTTGTTAACCCCACTAAGTTTTGGGGTAATTTGTTATGCAGCCATGCAACTGAAAGAAGCAGCTACAATATTTTTATAATGAAATTCTTAGCCAGGACCCTCATAGCCTAGCAAGAAGTTCTGTCTGGAAGAGCCCAGCTTTGGGGTTGGGTATGTCTGGGTTTTAATATGTCAAGAGGGCAGGCCCTGGAGACGGAGCACATGGATTTGAATCCCAGCCTCTCATAGGCAGGTTAATTAATTTCCCTGAATCTCAGTTTCTTCATCTCTCAATGGAGAAAATAATAGAAGCCACCTCACGGGAATTAAATGAGATTATTTACGCACAGCACCAAGGCTGTGGCTACTGTATTTGACCCCTGAAACAGTTAATTTTTCTTGACATCCCTTCCTTGGTATATGTATTAGTCAGGGTTCTCTAGAGGGACAGAACTAATAGGATATCTCTCTCTCTATAGATTTATATAAAGGGGAGTTTATTAAGTATTAACTTACACAATCACAAGGTCCTGCAATAGGTCGTCTGCAGGCTGAGGAGCAAGGAGAGCCAGTTCAAGTCCCAAAACTGAAGAACTTGGAGTCTGATGTTCGAGTCCAGGAAGCATCCAGCACAGGAGAAAGATGGAAGCTGGGAGGCCAGGCCTGACTCTCCTTTTCATGTTTTTCTGCCTGCTTTATATCCGCTGGCAGCTGATTAGGTGGTGCCCACCAGATTAAGGGTGGATCTGCCTTCCCCAGCCCACTGACTCAAATGTTAATCTCTTTTGGCAACACCCTCACAGACACACCCAGGATCAATACTGTCAGTTCAATCAAGTTGACACTCAGTATGAACCATCGCAATACAATAGGATTACTTTCTGTGATAACCTGTGTAAAAATAGGCAGTCATGATTTTCC</dnaseq>| | sequence = <dnaseq>CCAGCAGCGTGGCAGCCACCTGTGGGCTGTCCCAGAGAAACCCACTGACCACCAAGGGCAAGCAGCTAGTGCTGGGGAGGCTGCGAAGCCAAGAGAGGGAGAGGGAGATGGAGACAGAGAGGAGGGACAGGAGCCAGCTCTCCCCTCCGCCCATCCTCCAGGCTCCCACCAGCACTTCCCAGTCAGAAGCCTGTTGACAAGAGATCCCGTTCCTTGCCCAGGTGTTGGCCCAGCTCTCTTCATGGTTCCAAGAAGGCTGCCCCAGGAAGGCTTGTGGACAGAGGGAGAAGCATCTCTTCCTCTATGTCTCTTTTTATCTAAGAAACCAGTTTGACCAGCATCCTTCCCCTCGGCTCCCCAGGAGGAATGCACGGATCCCTTCGCCTTCCCCCATCCCTCCATGGTTGACTAAACCCACTAGGATCCACTCTTTTGCGTGGAAATGGGTTCAGGCCTCCCACGAAGAGCATGAAGATGCCCTCTGTTATGGGTTACATTATGTCCCCTGCCCCCGAGACCGTATGTTGAGTCCTAACCCTAGTATTGCAGAACGTGAATTTATTAGGAGATAGGGTCTTTATGGAGGTCATTAAGTTAAATGAGGGTGTTAGGGTGGGCTGGTGTCCTGATATAAAGGGGAAATTTGGGGCTGGGTGTAGTGGCTCACACATATAATCCCAGTGCCTCGAGAGGCCAAGGCAGGAGGATTGCTTGAGGGCAGGAGTTCAAGACCAGCTTGGGTAACATAGGGAGACCGGTATCTATAAAAAAAATTAAAAACAAAAAAATTAGCCGAGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAGTCCAGGAATTTGAGGCTGCAGTGAGCCATAAAAAGATGGGGGACGATGGAGACGCACAGGGAAAACACCTTGTGAATGCGGCAGAGATAAGGGTGATGCCTCTACACACCGAGGAACTTCAGAGACAACCAGTAAGTCACTGGGAGCTCGGGGAAGGCACAGCGCAGATGCTCGCTGCCCTCAGAGGGAAGCCAGCCCGCCAACCCCTTGATCTCAGACCTCTGGCCCCTGGAACTGTGAGATGATAGATTTCTGTCGTTTAAGCACAGTGGTGCTGTGTTATAGCAGCCCTAGGGAACCATCCACTATCAGAACAAAAGCAGGGCTGGACTGCTAGAAGAAAGGAGAGGAGAATGGCAGAGGATACCCACCTTGGGGCTGAATCTGAGATCACTCCAGGGCTCCCCAGGTTGTTTTGAAGAATGGAGATGGATTTGTGCAGGGCTCACTGTAGAAGCTCAGTGCAGCATGCGACGCTTATAAGGCTGCAATCCCCAGAGCTCAGTCCCTGAAGAGCGCTGCATTCACAGACATCAGCCAGCAGACAAACCAGTACCTATTGTCCCTGACCCCCAGAATCCAGCAGACATATAAAAGATGGTTGTTAACCCCACTAAGTTTTGGGGTAATTTGTTATGCAGCCATGCAACTGAAAGAAGCAGCTACAATATTTTTATAATGAAATTCTTAGCCAGGACCCTCATAGCCTAGCAAGAAGTTCTGTCTGGAAGAGCCCAGCTTTGGGGTTGGGTATGTCTGGGTTTTAATATGTCAAGAGGGCAGGCCCTGGAGACGGAGCACATGGATTTGAATCCCAGCCTCTCATAGGCAGGTTAATTAATTTCCCTGAATCTCAGTTTCTTCATCTCTCAATGGAGAAAATAATAGAAGCCACCTCACGGGAATTAAATGAGATTATTTACGCACAGCACCAAGGCTGTGGCTACTGTATTTGACCCCTGAAACAGTTAATTTTTCTTGACATCCCTTCCTTGGTATATGTATTAGTCAGGGTTCTCTAGAGGGACAGAACTAATAGGATATCTCTCTCTCTATAGATTTATATAAAGGGGAGTTTATTAAGTATTAACTTACACAATCACAAGGTCCTGCAATAGGTCGTCTGCAGGCTGAGGAGCAAGGAGAGCCAGTTCAAGTCCCAAAACTGAAGAACTTGGAGTCTGATGTTCGAGTCCAGGAAGCATCCAGCACAGGAGAAAGATGGAAGCTGGGAGGCCAGGCCTGACTCTCCTTTTCATGTTTTTCTGCCTGCTTTATATCCGCTGGCAGCTGATTAGGTGGTGCCCACCAGATTAAGGGTGGATCTGCCTTCCCCAGCCCACTGACTCAAATGTTAATCTCTTTTGGCAACACCCTCACAGACACACCCAGGATCAATACTGTCAGTTCAATCAAGTTGACACTCAGTATGAACCATCGCAATACAATAGGATTACTTTCTGTGATAACCTGTGTAAAAATAGGCAGTCATGATTTTCC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-HPCAL1-1]] | + | [[Category:Intergenic]][[Category:lnc-HPCAL1-1]][[Category:NONHSAG026984]] |
Revision as of 08:39, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-HPCAL1-1:13 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT069118 |
Classification |
intergenic |
Length |
2359 nt |
Genomic location |
chr2+:10595007..10597698 |
Exon number |
2 |
Exons |
10595007..10595215,10595549..10597698 |
Genome context |
|
Sequence |
000001 CCAGCAGCGT GGCAGCCACC TGTGGGCTGT CCCAGAGAAA CCCACTGACC ACCAAGGGCA AGCAGCTAGT GCTGGGGAGG 000080
000081 CTGCGAAGCC AAGAGAGGGA GAGGGAGATG GAGACAGAGA GGAGGGACAG GAGCCAGCTC TCCCCTCCGC CCATCCTCCA 000160 000161 GGCTCCCACC AGCACTTCCC AGTCAGAAGC CTGTTGACAA GAGATCCCGT TCCTTGCCCA GGTGTTGGCC CAGCTCTCTT 000240 000241 CATGGTTCCA AGAAGGCTGC CCCAGGAAGG CTTGTGGACA GAGGGAGAAG CATCTCTTCC TCTATGTCTC TTTTTATCTA 000320 000321 AGAAACCAGT TTGACCAGCA TCCTTCCCCT CGGCTCCCCA GGAGGAATGC ACGGATCCCT TCGCCTTCCC CCATCCCTCC 000400 000401 ATGGTTGACT AAACCCACTA GGATCCACTC TTTTGCGTGG AAATGGGTTC AGGCCTCCCA CGAAGAGCAT GAAGATGCCC 000480 000481 TCTGTTATGG GTTACATTAT GTCCCCTGCC CCCGAGACCG TATGTTGAGT CCTAACCCTA GTATTGCAGA ACGTGAATTT 000560 000561 ATTAGGAGAT AGGGTCTTTA TGGAGGTCAT TAAGTTAAAT GAGGGTGTTA GGGTGGGCTG GTGTCCTGAT ATAAAGGGGA 000640 000641 AATTTGGGGC TGGGTGTAGT GGCTCACACA TATAATCCCA GTGCCTCGAG AGGCCAAGGC AGGAGGATTG CTTGAGGGCA 000720 000721 GGAGTTCAAG ACCAGCTTGG GTAACATAGG GAGACCGGTA TCTATAAAAA AAATTAAAAA CAAAAAAATT AGCCGAGTGT 000800 000801 GGTGGTGCAT GCCTGTAGTC CCAGCTACTC AGGAGGCTGA GGTGGGAGGA TCGCTTGAGT CCAGGAATTT GAGGCTGCAG 000880 000881 TGAGCCATAA AAAGATGGGG GACGATGGAG ACGCACAGGG AAAACACCTT GTGAATGCGG CAGAGATAAG GGTGATGCCT 000960 000961 CTACACACCG AGGAACTTCA GAGACAACCA GTAAGTCACT GGGAGCTCGG GGAAGGCACA GCGCAGATGC TCGCTGCCCT 001040 001041 CAGAGGGAAG CCAGCCCGCC AACCCCTTGA TCTCAGACCT CTGGCCCCTG GAACTGTGAG ATGATAGATT TCTGTCGTTT 001120 001121 AAGCACAGTG GTGCTGTGTT ATAGCAGCCC TAGGGAACCA TCCACTATCA GAACAAAAGC AGGGCTGGAC TGCTAGAAGA 001200 001201 AAGGAGAGGA GAATGGCAGA GGATACCCAC CTTGGGGCTG AATCTGAGAT CACTCCAGGG CTCCCCAGGT TGTTTTGAAG 001280 001281 AATGGAGATG GATTTGTGCA GGGCTCACTG TAGAAGCTCA GTGCAGCATG CGACGCTTAT AAGGCTGCAA TCCCCAGAGC 001360 001361 TCAGTCCCTG AAGAGCGCTG CATTCACAGA CATCAGCCAG CAGACAAACC AGTACCTATT GTCCCTGACC CCCAGAATCC 001440 001441 AGCAGACATA TAAAAGATGG TTGTTAACCC CACTAAGTTT TGGGGTAATT TGTTATGCAG CCATGCAACT GAAAGAAGCA 001520 001521 GCTACAATAT TTTTATAATG AAATTCTTAG CCAGGACCCT CATAGCCTAG CAAGAAGTTC TGTCTGGAAG AGCCCAGCTT 001600 001601 TGGGGTTGGG TATGTCTGGG TTTTAATATG TCAAGAGGGC AGGCCCTGGA GACGGAGCAC ATGGATTTGA ATCCCAGCCT 001680 001681 CTCATAGGCA GGTTAATTAA TTTCCCTGAA TCTCAGTTTC TTCATCTCTC AATGGAGAAA ATAATAGAAG CCACCTCACG 001760 001761 GGAATTAAAT GAGATTATTT ACGCACAGCA CCAAGGCTGT GGCTACTGTA TTTGACCCCT GAAACAGTTA ATTTTTCTTG 001840 001841 ACATCCCTTC CTTGGTATAT GTATTAGTCA GGGTTCTCTA GAGGGACAGA ACTAATAGGA TATCTCTCTC TCTATAGATT 001920 001921 TATATAAAGG GGAGTTTATT AAGTATTAAC TTACACAATC ACAAGGTCCT GCAATAGGTC GTCTGCAGGC TGAGGAGCAA 002000 002001 GGAGAGCCAG TTCAAGTCCC AAAACTGAAG AACTTGGAGT CTGATGTTCG AGTCCAGGAA GCATCCAGCA CAGGAGAAAG 002080 002081 ATGGAAGCTG GGAGGCCAGG CCTGACTCTC CTTTTCATGT TTTTCTGCCT GCTTTATATC CGCTGGCAGC TGATTAGGTG 002160 002161 GTGCCCACCA GATTAAGGGT GGATCTGCCT TCCCCAGCCC ACTGACTCAA ATGTTAATCT CTTTTGGCAA CACCCTCACA 002240 002241 GACACACCCA GGATCAATAC TGTCAGTTCA ATCAAGTTGA CACTCAGTAT GAACCATCGC AATACAATAG GATTACTTTC 002320 002321 TGTGATAACC TGTGTAAAAA TAGGCAGTCA TGATTTTCC |