Difference between revisions of "ENST00000442621.1"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>TGCCACTGCCATGTAAGAAGTGCCTTTCACCACCCCCACACCCTGCCATGACTCTGAGGCCTCCCCAGCCACGTGGAACTGAGGCAGCTGTATGGAGGCCAATATGCAGACAAGGGAAGTAACTCAGGCATTTTGGGGGAGAGGTACAGAAAGAAGAGAAAAGACTGAACTGACTGCTGTTCTGAACAAGAACTGTGACTATATGTGGTACTCCCAGAATGCTGGTTTCCTTTCAGACCCATCAAGTGGCCATCCTATTGGCTTGGACTGAAGACCCCCACTGGAGAACTGTCTCTGCAGCCTATACTGATGACACTGGCCACTGTCCAGGGCTCCACCCCAAGGAGTCCAAGCCCCAGACATTTAGCCTTAGAGAGAATCCAGATTTTGCATTTCCAGTGCAGGGATTGATGGAGCCTTGTGTATCAAAGTGCCAATTTCTTTCTAACAAGCTAGGGAGGATACCGTTGACAGCAGCAGAAAGGGGTAGCAGTGGTTTGCTTTCCAAATGGTAATAAGAAGGGCCTGGCAGTGGCAACCTGTCCACGTATCATTAAAAATGGACTCTCCTGCTTCGTTTGGAATTCAACCCAATGAACTTGAATAAACTCTGGACAATGACCAGCACAGAGCCCTAAGCAGGATACAGCAAGATTATTTGCTTTACTCATCCACTGAGTACCTACCATGTGCCAAATACTATGCTATATGCCGAGTATACACTGGCAAATAAAACAGATATGGTCCCTGGAGCCTATGAATCTTACCCCATCTAGCCACAAATAATAAAAATAAGAAGAATCTGAAGGACAAGTGGGACAGAAATACTCAAGCAGAATGAGGGTGAGATTGAAGTCCCTGAACATACAGTGCCCTTTACACTTGATCTTAGCCAAAAGGCCGAGAAGAGATTACAGTGCTTTTTAAAGGTAGCATTTCACCCAGCCAATAATCAATCCCTTTGGCCTTCTTGAGGTGCAAGGCCACACACTCAAATTCTTTAATCAAACAATAGGCTAGTGCAAATGGAGCTATTTCTTAAACCCAGCTGTTTACACAGCAGCTACAAATCTGTTCAGAAGGAATCCCCCACCATCCACAACTGTCTATCGAGCAGATGTGCAAGAGTATTTGTCTCTCACCACCAGGGTTGCAGTCAGGACAAGAGAGCAGGTTTGAACGTCTTCGGCTCCTAGAACTGCACAAGCTGTGTCTTCAGTGCCCAGAGGCGGCTGCAACGTCTCCCCAGTTCTCCTCTCAGAACAATGGAAATTTTTTTTAGAGGCGTAATAGGAAGGTTTGCATTGAATTATTAAACAATGGGTATTGAAAAATATGTTTTCTTTGACCTCTGTACTTCTAGCTTTTACCAGTCAGTGTTTTCTTGTACCAAGGCTAAGATATGTATAACACTGAAATGGATGTCTTCTTATATAATATTTTACAAGCTTTTGAAAACCTGTGCCCTTTAATAAATTTTAAAACGTTT</dnaseq>|
 
sequence = <dnaseq>TGCCACTGCCATGTAAGAAGTGCCTTTCACCACCCCCACACCCTGCCATGACTCTGAGGCCTCCCCAGCCACGTGGAACTGAGGCAGCTGTATGGAGGCCAATATGCAGACAAGGGAAGTAACTCAGGCATTTTGGGGGAGAGGTACAGAAAGAAGAGAAAAGACTGAACTGACTGCTGTTCTGAACAAGAACTGTGACTATATGTGGTACTCCCAGAATGCTGGTTTCCTTTCAGACCCATCAAGTGGCCATCCTATTGGCTTGGACTGAAGACCCCCACTGGAGAACTGTCTCTGCAGCCTATACTGATGACACTGGCCACTGTCCAGGGCTCCACCCCAAGGAGTCCAAGCCCCAGACATTTAGCCTTAGAGAGAATCCAGATTTTGCATTTCCAGTGCAGGGATTGATGGAGCCTTGTGTATCAAAGTGCCAATTTCTTTCTAACAAGCTAGGGAGGATACCGTTGACAGCAGCAGAAAGGGGTAGCAGTGGTTTGCTTTCCAAATGGTAATAAGAAGGGCCTGGCAGTGGCAACCTGTCCACGTATCATTAAAAATGGACTCTCCTGCTTCGTTTGGAATTCAACCCAATGAACTTGAATAAACTCTGGACAATGACCAGCACAGAGCCCTAAGCAGGATACAGCAAGATTATTTGCTTTACTCATCCACTGAGTACCTACCATGTGCCAAATACTATGCTATATGCCGAGTATACACTGGCAAATAAAACAGATATGGTCCCTGGAGCCTATGAATCTTACCCCATCTAGCCACAAATAATAAAAATAAGAAGAATCTGAAGGACAAGTGGGACAGAAATACTCAAGCAGAATGAGGGTGAGATTGAAGTCCCTGAACATACAGTGCCCTTTACACTTGATCTTAGCCAAAAGGCCGAGAAGAGATTACAGTGCTTTTTAAAGGTAGCATTTCACCCAGCCAATAATCAATCCCTTTGGCCTTCTTGAGGTGCAAGGCCACACACTCAAATTCTTTAATCAAACAATAGGCTAGTGCAAATGGAGCTATTTCTTAAACCCAGCTGTTTACACAGCAGCTACAAATCTGTTCAGAAGGAATCCCCCACCATCCACAACTGTCTATCGAGCAGATGTGCAAGAGTATTTGTCTCTCACCACCAGGGTTGCAGTCAGGACAAGAGAGCAGGTTTGAACGTCTTCGGCTCCTAGAACTGCACAAGCTGTGTCTTCAGTGCCCAGAGGCGGCTGCAACGTCTCCCCAGTTCTCCTCTCAGAACAATGGAAATTTTTTTTAGAGGCGTAATAGGAAGGTTTGCATTGAATTATTAAACAATGGGTATTGAAAAATATGTTTTCTTTGACCTCTGTACTTCTAGCTTTTACCAGTCAGTGTTTTCTTGTACCAAGGCTAAGATATGTATAACACTGAAATGGATGTCTTCTTATATAATATTTTACAAGCTTTTGAAAACCTGTGCCCTTTAATAAATTTTAAAACGTTT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000236719.2]]
+
[[Category:Intergenic]][[Category:ENSG00000236719.2]][[Category:lnc-XPR1-2]]

Revision as of 08:45, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000442621.1

Source

Gencode19

Same with

lnc-XPR1-2:2

Classification

intergenic

Length

1489 nt

Genomic location

chr1+:180528112..180535654

Exon number

3

Exons

180528112..180528191,180531340..180531480,180534387..180535654

Genome context

Sequence
000001 TGCCACTGCC ATGTAAGAAG TGCCTTTCAC CACCCCCACA CCCTGCCATG ACTCTGAGGC CTCCCCAGCC ACGTGGAACT 000080
000081 GAGGCAGCTG TATGGAGGCC AATATGCAGA CAAGGGAAGT AACTCAGGCA TTTTGGGGGA GAGGTACAGA AAGAAGAGAA 000160
000161 AAGACTGAAC TGACTGCTGT TCTGAACAAG AACTGTGACT ATATGTGGTA CTCCCAGAAT GCTGGTTTCC TTTCAGACCC 000240
000241 ATCAAGTGGC CATCCTATTG GCTTGGACTG AAGACCCCCA CTGGAGAACT GTCTCTGCAG CCTATACTGA TGACACTGGC 000320
000321 CACTGTCCAG GGCTCCACCC CAAGGAGTCC AAGCCCCAGA CATTTAGCCT TAGAGAGAAT CCAGATTTTG CATTTCCAGT 000400
000401 GCAGGGATTG ATGGAGCCTT GTGTATCAAA GTGCCAATTT CTTTCTAACA AGCTAGGGAG GATACCGTTG ACAGCAGCAG 000480
000481 AAAGGGGTAG CAGTGGTTTG CTTTCCAAAT GGTAATAAGA AGGGCCTGGC AGTGGCAACC TGTCCACGTA TCATTAAAAA 000560
000561 TGGACTCTCC TGCTTCGTTT GGAATTCAAC CCAATGAACT TGAATAAACT CTGGACAATG ACCAGCACAG AGCCCTAAGC 000640
000641 AGGATACAGC AAGATTATTT GCTTTACTCA TCCACTGAGT ACCTACCATG TGCCAAATAC TATGCTATAT GCCGAGTATA 000720
000721 CACTGGCAAA TAAAACAGAT ATGGTCCCTG GAGCCTATGA ATCTTACCCC ATCTAGCCAC AAATAATAAA AATAAGAAGA 000800
000801 ATCTGAAGGA CAAGTGGGAC AGAAATACTC AAGCAGAATG AGGGTGAGAT TGAAGTCCCT GAACATACAG TGCCCTTTAC 000880
000881 ACTTGATCTT AGCCAAAAGG CCGAGAAGAG ATTACAGTGC TTTTTAAAGG TAGCATTTCA CCCAGCCAAT AATCAATCCC 000960
000961 TTTGGCCTTC TTGAGGTGCA AGGCCACACA CTCAAATTCT TTAATCAAAC AATAGGCTAG TGCAAATGGA GCTATTTCTT 001040
001041 AAACCCAGCT GTTTACACAG CAGCTACAAA TCTGTTCAGA AGGAATCCCC CACCATCCAC AACTGTCTAT CGAGCAGATG 001120
001121 TGCAAGAGTA TTTGTCTCTC ACCACCAGGG TTGCAGTCAG GACAAGAGAG CAGGTTTGAA CGTCTTCGGC TCCTAGAACT 001200
001201 GCACAAGCTG TGTCTTCAGT GCCCAGAGGC GGCTGCAACG TCTCCCCAGT TCTCCTCTCA GAACAATGGA AATTTTTTTT 001280
001281 AGAGGCGTAA TAGGAAGGTT TGCATTGAAT TATTAAACAA TGGGTATTGA AAAATATGTT TTCTTTGACC TCTGTACTTC 001360
001361 TAGCTTTTAC CAGTCAGTGT TTTCTTGTAC CAAGGCTAAG ATATGTATAA CACTGAAATG GATGTCTTCT TATATAATAT 001440
001441 TTTACAAGCT TTTGAAAACC TGTGCCCTTT AATAAATTTT AAAACGTTT
[back to top]