Difference between revisions of "Lnc-SLC44A3-1:3"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>CAGGCATCCTCCGCGGCGGGCCGGACCGGGCCGGCGGAGGGGAGCGGAAGCCCACCGGGGCTGGCCCGCCGCTGACCCGCCGCCTCCGTCTGCCTCCTCCCGGGCTCTGGGCCCAGCGCGCCCAGATGCCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGGGCCTCCACCGACACCTGCTTCTTCCCTCACCTCGCAGCCTTCCACACCTGTTGATCTGACCTCTGCCCCGCTGCCGCCCAGGAGTAACCTAAGGCTTTTGGCCTGATTCGAGCTCACTCCGTCTAAACCTCTAAATGCGGTGCGAAAAAATCCTGGGGAATGTGCCATGCAAAGCCTGGGCATTTCAAGTGCTTTTCTGGATTCGCATCAACTCCTCTTTACAGGCATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTGTGTTTTTGAATCCCGGGGCCTCTTTGAATCAGAAGCCCTTTGTATAGAGATAAGTATCCTTTAGGCCAGAATCAGCCTCCATTTTTTTCGCAGTCCCATTTCCTACCCGTAATACTTTCTTCTGATTTTAAAGCCATTTGATAGAGAAGGGACAGGGAACAGAACCTTCGCCCCCCGCCTGAGCAGCTGGTAGACTAGATATCTTCCAAACATTATCTCATTTACTTCCCTGGAGTTACAAATAGGTAGATTTCATGTCCGTTGAGGGGTGAGAAAGCTGAAACTTTGAGACTTAAGAATCCTGGCCGAGGTCAGCCTCCTCCGAAGCTTCATCTCTTGCCACCACTTTCTGGTGCACACCTAGGACAGATTTCAATCCCTGAGATCCCAGGATGAAACCTATGTTTGCCAAATACCAGCTACTGTGCCAGAAGAGATCATGGAACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGACCAACTCCCCTTCTTCCACCTTCCCAACCTACTCAATGTGAAGATGATGAAGATGAAGACCTTTGTCATGATCCACATCCACTTAATAAATGTTTCTGCCATTTCAGTTCCTGTTATCGTGCTTTGAGGTGCACTGAACTGCAGCAAACCCAGGGGATCCAAGGCTACGTTGAAAAGCCTTTGACCACAGTGCAGGGAGCAGAAGACATTAATGACGTGATGTCGACACAGCCCGCACTCAGGATCCTCCAGGAAAAGAACACAGAGATAACCCCGGATCGATGGTACTTTTTGAAAATGCTTTATTGCAAAAGAGTGGCTAGGGTTTTACAAGGGCTATGAAGAAACATATTAAGGTTAATAAAGCTTTTTATTGAGTGTTTACTGAGTGTTACTATGTGCTTTACATCTATTAACTCATTTCATCTTCAAAACAACCCTATAAAGATGTTACAACTATAATCCTAACCTTACAAATGAAACAACTGAGGCACAGTGAAGTGCAGTGGCCTGCCCAGGTAAAAAGCAAGACAGAATTTGAACCCAGGCAGCCTGACCCCAGGGTCCAGGTATTAAACCATTCTGCTATAGTGCCTCTAAGATAACAGAGAAACTTGATGAATTACTGGGTTACTGAATTTTAGTTTACATAGGTTGTTTTTTTCCCCTTAAGAGTAGAACAAAACATACCTGAAGTATGGAAAATAACATTTATT</dnaseq>|
 
sequence = <dnaseq>CAGGCATCCTCCGCGGCGGGCCGGACCGGGCCGGCGGAGGGGAGCGGAAGCCCACCGGGGCTGGCCCGCCGCTGACCCGCCGCCTCCGTCTGCCTCCTCCCGGGCTCTGGGCCCAGCGCGCCCAGATGCCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGGGCCTCCACCGACACCTGCTTCTTCCCTCACCTCGCAGCCTTCCACACCTGTTGATCTGACCTCTGCCCCGCTGCCGCCCAGGAGTAACCTAAGGCTTTTGGCCTGATTCGAGCTCACTCCGTCTAAACCTCTAAATGCGGTGCGAAAAAATCCTGGGGAATGTGCCATGCAAAGCCTGGGCATTTCAAGTGCTTTTCTGGATTCGCATCAACTCCTCTTTACAGGCATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTGTGTTTTTGAATCCCGGGGCCTCTTTGAATCAGAAGCCCTTTGTATAGAGATAAGTATCCTTTAGGCCAGAATCAGCCTCCATTTTTTTCGCAGTCCCATTTCCTACCCGTAATACTTTCTTCTGATTTTAAAGCCATTTGATAGAGAAGGGACAGGGAACAGAACCTTCGCCCCCCGCCTGAGCAGCTGGTAGACTAGATATCTTCCAAACATTATCTCATTTACTTCCCTGGAGTTACAAATAGGTAGATTTCATGTCCGTTGAGGGGTGAGAAAGCTGAAACTTTGAGACTTAAGAATCCTGGCCGAGGTCAGCCTCCTCCGAAGCTTCATCTCTTGCCACCACTTTCTGGTGCACACCTAGGACAGATTTCAATCCCTGAGATCCCAGGATGAAACCTATGTTTGCCAAATACCAGCTACTGTGCCAGAAGAGATCATGGAACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGACCAACTCCCCTTCTTCCACCTTCCCAACCTACTCAATGTGAAGATGATGAAGATGAAGACCTTTGTCATGATCCACATCCACTTAATAAATGTTTCTGCCATTTCAGTTCCTGTTATCGTGCTTTGAGGTGCACTGAACTGCAGCAAACCCAGGGGATCCAAGGCTACGTTGAAAAGCCTTTGACCACAGTGCAGGGAGCAGAAGACATTAATGACGTGATGTCGACACAGCCCGCACTCAGGATCCTCCAGGAAAAGAACACAGAGATAACCCCGGATCGATGGTACTTTTTGAAAATGCTTTATTGCAAAAGAGTGGCTAGGGTTTTACAAGGGCTATGAAGAAACATATTAAGGTTAATAAAGCTTTTTATTGAGTGTTTACTGAGTGTTACTATGTGCTTTACATCTATTAACTCATTTCATCTTCAAAACAACCCTATAAAGATGTTACAACTATAATCCTAACCTTACAAATGAAACAACTGAGGCACAGTGAAGTGCAGTGGCCTGCCCAGGTAAAAAGCAAGACAGAATTTGAACCCAGGCAGCCTGACCCCAGGGTCCAGGTATTAAACCATTCTGCTATAGTGCCTCTAAGATAACAGAGAAACTTGATGAATTACTGGGTTACTGAATTTTAGTTTACATAGGTTGTTTTTTTCCCCTTAAGAGTAGAACAAAACATACCTGAAGTATGGAAAATAACATTTATT</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:lnc-SLC44A3-1]]

Revision as of 08:52, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-SLC44A3-1:3

Source

LNCipedia2.1

Same with

NONHSAT004627

Classification

intergenic

Length

1827 nt

Genomic location

chr1+:95392967..95429158

Exon number

4

Exons

95392967..95393958,95397428..95397541,95405385..95405481,95428535..95429158

Genome context

Sequence
000001 CAGGCATCCT CCGCGGCGGG CCGGACCGGG CCGGCGGAGG GGAGCGGAAG CCCACCGGGG CTGGCCCGCC GCTGACCCGC 000080
000081 CGCCTCCGTC TGCCTCCTCC CGGGCTCTGG GCCCAGCGCG CCCAGATGCC GGGCAGGACC CCTCCGCCCG CTGCTGGAAC 000160
000161 ACCAATAGCA GCGTTGGAGC CTCTGGGCCG GAGGAACTGG GGCCTCCACC GACACCTGCT TCTTCCCTCA CCTCGCAGCC 000240
000241 TTCCACACCT GTTGATCTGA CCTCTGCCCC GCTGCCGCCC AGGAGTAACC TAAGGCTTTT GGCCTGATTC GAGCTCACTC 000320
000321 CGTCTAAACC TCTAAATGCG GTGCGAAAAA ATCCTGGGGA ATGTGCCATG CAAAGCCTGG GCATTTCAAG TGCTTTTCTG 000400
000401 GATTCGCATC AACTCCTCTT TACAGGCATC TTTATCCGGA ATTCAGCTCG TCCCAAACCC CACGTGGTGT AGCTCTGCTT 000480
000481 GTGTTTTTGA ATCCCGGGGC CTCTTTGAAT CAGAAGCCCT TTGTATAGAG ATAAGTATCC TTTAGGCCAG AATCAGCCTC 000560
000561 CATTTTTTTC GCAGTCCCAT TTCCTACCCG TAATACTTTC TTCTGATTTT AAAGCCATTT GATAGAGAAG GGACAGGGAA 000640
000641 CAGAACCTTC GCCCCCCGCC TGAGCAGCTG GTAGACTAGA TATCTTCCAA ACATTATCTC ATTTACTTCC CTGGAGTTAC 000720
000721 AAATAGGTAG ATTTCATGTC CGTTGAGGGG TGAGAAAGCT GAAACTTTGA GACTTAAGAA TCCTGGCCGA GGTCAGCCTC 000800
000801 CTCCGAAGCT TCATCTCTTG CCACCACTTT CTGGTGCACA CCTAGGACAG ATTTCAATCC CTGAGATCCC AGGATGAAAC 000880
000881 CTATGTTTGC CAAATACCAG CTACTGTGCC AGAAGAGATC ATGGAACCAG GTGTGGAAAG CTGCTTGAGA AGAGGAGCCA 000960
000961 AAACATCATA GTTGAACCGT CCTGGAATAG AAACTCGCCC TGAATTCTTT CTTGTGTGAA ATCCAAGAGC CCTCTCTTGG 001040
001041 GGTTGGATCG GGACCCTGTT CCTGTAACAA GTCCACAATG CCAGAGAATT AAAGAGAACC ACAAAGCAAG ACCAACTCCC 001120
001121 CTTCTTCCAC CTTCCCAACC TACTCAATGT GAAGATGATG AAGATGAAGA CCTTTGTCAT GATCCACATC CACTTAATAA 001200
001201 ATGTTTCTGC CATTTCAGTT CCTGTTATCG TGCTTTGAGG TGCACTGAAC TGCAGCAAAC CCAGGGGATC CAAGGCTACG 001280
001281 TTGAAAAGCC TTTGACCACA GTGCAGGGAG CAGAAGACAT TAATGACGTG ATGTCGACAC AGCCCGCACT CAGGATCCTC 001360
001361 CAGGAAAAGA ACACAGAGAT AACCCCGGAT CGATGGTACT TTTTGAAAAT GCTTTATTGC AAAAGAGTGG CTAGGGTTTT 001440
001441 ACAAGGGCTA TGAAGAAACA TATTAAGGTT AATAAAGCTT TTTATTGAGT GTTTACTGAG TGTTACTATG TGCTTTACAT 001520
001521 CTATTAACTC ATTTCATCTT CAAAACAACC CTATAAAGAT GTTACAACTA TAATCCTAAC CTTACAAATG AAACAACTGA 001600
001601 GGCACAGTGA AGTGCAGTGG CCTGCCCAGG TAAAAAGCAA GACAGAATTT GAACCCAGGC AGCCTGACCC CAGGGTCCAG 001680
001681 GTATTAAACC ATTCTGCTAT AGTGCCTCTA AGATAACAGA GAAACTTGAT GAATTACTGG GTTACTGAAT TTTAGTTTAC 001760
001761 ATAGGTTGTT TTTTTCCCCT TAAGAGTAGA ACAAAACATA CCTGAAGTAT GGAAAATAAC ATTTATT
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