Difference between revisions of "Lnc-CHST12-1:6"
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sequence = <dnaseq>TGGGTCTCTGGCGGACAGTCAGTCTCATTTCCAGATGGGGAAAGGGAGACCCAGGCTGCGGTGACCCACTGAGGCACAGGATCAGTGAGAACCCAGCCCTGGCTTTGCCCAGACCTCTCAAGGGCACTTCGTGGGACCATTGCCGGCCGTTGTGGCATCTGTCCCTGGCCTTGCCCCCATCCGTCTCTGCACAGCCCAGGTGGGTCCGAGCCAGCCCCAGGTCTCCAGGGTCCCAGCCCAGCCTCTAGAAGAGCCAGCAGCAGGGCTGGAAGGGAGAGCACATGCTGGGCCTTGGGGCTGCCTTGGACCTCAGGCCGTTGACAAGGAAAAGCGGAGAGTTGGGAAAAAAGGACAAATAGCTGAGCGCCAGCCGCAGTCTGGGGGACGGGAGCCTCGTGCGACTCTCGGAGTGCTGGCCAGATTGGCAGAGGGGAGGAGAGAGGAAAAACCCAGGCTCTGAGGAAAAACCTCTCCAGCCCAGCGCGTGGCCTGGCATTAACCCACTGCAGCCCCAGGAAGTGGTTCCACCCCAGGCAGCCAACAAGGCGGTGCCTGAACTATGTCTGTGGATGACGGAGCCACGACCTGTCCCTCAGGGCTCAGCGCTGCGGCTATGTCCAGGGACCCCTGGCTGTGCCCACGTCGGGGCTTCCCGTTCCTTACCTGCCATGAGAATGAGATGTCCAGGGACCTCCCTGCTCCAGCTGGGACCTGTGGGGCTTTGTCTGTTGTCCCGAGCACCTTGGAGATGTCATTTCTAACATTTTAACCCAGGAATCCCCCCACCAAGGGACAGAGTGCAAGGACATGATCGAACAGAAAAAGTTCTGGTACAAGATCAACCCCGTGGGGTGGTGAGTGCTGCAGCCCCGGGCCTCACATCCTGCCGTCCCTGTGGGAGATTGGAGCGGTCCCAGTGCCCACCGCTGATTCTCTGGCTCCAGCAACCCCTCCAGGTGGATCCGTCCCACGCAGCCTGGCCTGAAACACTGCCCAGCCACTGGGTCCAGTAAGACAGAGCCTCGAGTCATTCTGCCAAGAGGATCCAGAAACACAGACTTTTTCTGGGGTCCTGGAGGCTTCTGGCCCATGGGGAGCCCCTGGGTCCCAGCGATCCAGCCCTGATGTGCTGAGGGTGCAGGGCCCAGCTGCAGAGCAGAGGAGAGTGGCCCCCAGGGACCAGCAGCACGAAAGGCACACTGAGGCACACTGGCAGGCCTGGGCTGCAGAGAGCCTGAAGGTCATGGGGTAGCTGGTGGAAGCAGGAAGACCCCATACAGCAGCGACCACTGAGGCTGGTGCTGCACTTTCTCAGGGAATTGAGTGTGGGCTCCCACCATCCCGGCCACTGGCTTCCTCCAAAGCCTCCTCCTCTTACATCAGCAAACCTTCTGTTCGGTGACCCCCTCAGTGACCCTCTGTGCTTGCCTTCGTGGTCTTCCTCATGGAGGATTTCGGGTCAGCGTGGGGGTCAGAGGTCATTTCCCATACCCCCTCAAAGGTACTTCTTGCTGTGGTCCCCACACTCTGACACCCTCTTCTGAAATGAACACTTTTTTGTTGTTGTTGTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTTAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCATGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCAAGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTTCTGACCTCAAGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACTGCGCCCGGCCACAAACACTTTTTTTTTTTTAAACAAGTGAAAACAAGTTTATTAACAAAGTTAAGAAATAAAGAATGGCTATTCCATAGGGAGAGCAGCCTGAATAAACACTTTTTTTGTTGTTGTTGAGGCAGAGCCTCACTCTGTCGCCCAGGCAGGAGTGCAGTGGTGCGACCTCAGCTCTCAGCTCCCTGCACCGTCCACCTCCTGGGTTCAAGCGCTTCTTCCCCAAGTAGCTGGGACTATAGGCACACACCACCATGCCCGGCTAATTTTTCTCTTTTTAGTAGAGACAGGATTTCGCCATGTGGGTCGGGCTGGTCTCGAACTCCTGGTCTCAAGTGATCCGCCCTCCTCGGCCTTCCAAAATGCTAGGATTACAGGCATGAGCCGCCGTGCCTGGCCACAAACATATTTTAAATTTGAACAATAAAGGAACTGGACCAGGAAGTGTGGAGTTGGGGAGACCCTGCTCTCGCCAGGTGCCTTCCCGGCAGGTTGTCTCTGCCTCCCCTTGCACCCCTTGAATGGCGGGCTCCCTCTCCCATAGCCCCTGCCAGGCTGGATAACCAACTTCATTCTTATACCCGTCCGAATCTGCCCCCTGTTAATGGCACCCACCAGTCCTTGTCCAAACCTCGAAGCTCAGGACCTCACAGAGCACCA</dnaseq>| | sequence = <dnaseq>TGGGTCTCTGGCGGACAGTCAGTCTCATTTCCAGATGGGGAAAGGGAGACCCAGGCTGCGGTGACCCACTGAGGCACAGGATCAGTGAGAACCCAGCCCTGGCTTTGCCCAGACCTCTCAAGGGCACTTCGTGGGACCATTGCCGGCCGTTGTGGCATCTGTCCCTGGCCTTGCCCCCATCCGTCTCTGCACAGCCCAGGTGGGTCCGAGCCAGCCCCAGGTCTCCAGGGTCCCAGCCCAGCCTCTAGAAGAGCCAGCAGCAGGGCTGGAAGGGAGAGCACATGCTGGGCCTTGGGGCTGCCTTGGACCTCAGGCCGTTGACAAGGAAAAGCGGAGAGTTGGGAAAAAAGGACAAATAGCTGAGCGCCAGCCGCAGTCTGGGGGACGGGAGCCTCGTGCGACTCTCGGAGTGCTGGCCAGATTGGCAGAGGGGAGGAGAGAGGAAAAACCCAGGCTCTGAGGAAAAACCTCTCCAGCCCAGCGCGTGGCCTGGCATTAACCCACTGCAGCCCCAGGAAGTGGTTCCACCCCAGGCAGCCAACAAGGCGGTGCCTGAACTATGTCTGTGGATGACGGAGCCACGACCTGTCCCTCAGGGCTCAGCGCTGCGGCTATGTCCAGGGACCCCTGGCTGTGCCCACGTCGGGGCTTCCCGTTCCTTACCTGCCATGAGAATGAGATGTCCAGGGACCTCCCTGCTCCAGCTGGGACCTGTGGGGCTTTGTCTGTTGTCCCGAGCACCTTGGAGATGTCATTTCTAACATTTTAACCCAGGAATCCCCCCACCAAGGGACAGAGTGCAAGGACATGATCGAACAGAAAAAGTTCTGGTACAAGATCAACCCCGTGGGGTGGTGAGTGCTGCAGCCCCGGGCCTCACATCCTGCCGTCCCTGTGGGAGATTGGAGCGGTCCCAGTGCCCACCGCTGATTCTCTGGCTCCAGCAACCCCTCCAGGTGGATCCGTCCCACGCAGCCTGGCCTGAAACACTGCCCAGCCACTGGGTCCAGTAAGACAGAGCCTCGAGTCATTCTGCCAAGAGGATCCAGAAACACAGACTTTTTCTGGGGTCCTGGAGGCTTCTGGCCCATGGGGAGCCCCTGGGTCCCAGCGATCCAGCCCTGATGTGCTGAGGGTGCAGGGCCCAGCTGCAGAGCAGAGGAGAGTGGCCCCCAGGGACCAGCAGCACGAAAGGCACACTGAGGCACACTGGCAGGCCTGGGCTGCAGAGAGCCTGAAGGTCATGGGGTAGCTGGTGGAAGCAGGAAGACCCCATACAGCAGCGACCACTGAGGCTGGTGCTGCACTTTCTCAGGGAATTGAGTGTGGGCTCCCACCATCCCGGCCACTGGCTTCCTCCAAAGCCTCCTCCTCTTACATCAGCAAACCTTCTGTTCGGTGACCCCCTCAGTGACCCTCTGTGCTTGCCTTCGTGGTCTTCCTCATGGAGGATTTCGGGTCAGCGTGGGGGTCAGAGGTCATTTCCCATACCCCCTCAAAGGTACTTCTTGCTGTGGTCCCCACACTCTGACACCCTCTTCTGAAATGAACACTTTTTTGTTGTTGTTGTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTTAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCATGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCAAGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTTCTGACCTCAAGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACTGCGCCCGGCCACAAACACTTTTTTTTTTTTAAACAAGTGAAAACAAGTTTATTAACAAAGTTAAGAAATAAAGAATGGCTATTCCATAGGGAGAGCAGCCTGAATAAACACTTTTTTTGTTGTTGTTGAGGCAGAGCCTCACTCTGTCGCCCAGGCAGGAGTGCAGTGGTGCGACCTCAGCTCTCAGCTCCCTGCACCGTCCACCTCCTGGGTTCAAGCGCTTCTTCCCCAAGTAGCTGGGACTATAGGCACACACCACCATGCCCGGCTAATTTTTCTCTTTTTAGTAGAGACAGGATTTCGCCATGTGGGTCGGGCTGGTCTCGAACTCCTGGTCTCAAGTGATCCGCCCTCCTCGGCCTTCCAAAATGCTAGGATTACAGGCATGAGCCGCCGTGCCTGGCCACAAACATATTTTAAATTTGAACAATAAAGGAACTGGACCAGGAAGTGTGGAGTTGGGGAGACCCTGCTCTCGCCAGGTGCCTTCCCGGCAGGTTGTCTCTGCCTCCCCTTGCACCCCTTGAATGGCGGGCTCCCTCTCCCATAGCCCCTGCCAGGCTGGATAACCAACTTCATTCTTATACCCGTCCGAATCTGCCCCCTGTTAATGGCACCCACCAGTCCTTGTCCAAACCTCGAAGCTCAGGACCTCACAGAGCACCA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-CHST12-1]] | + | [[Category:Intergenic]][[Category:lnc-CHST12-1]][[Category:NONHSAG046798]] |
Revision as of 09:13, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-CHST12-1:6 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT118805 |
Classification |
intergenic |
Length |
2509 nt |
Genomic location |
chr7+:2483360..2488063 |
Exon number |
2 |
Exons |
2483360..2483381,2485577..2488063 |
Genome context |
|
Sequence |
000001 TGGGTCTCTG GCGGACAGTC AGTCTCATTT CCAGATGGGG AAAGGGAGAC CCAGGCTGCG GTGACCCACT GAGGCACAGG 000080
000081 ATCAGTGAGA ACCCAGCCCT GGCTTTGCCC AGACCTCTCA AGGGCACTTC GTGGGACCAT TGCCGGCCGT TGTGGCATCT 000160 000161 GTCCCTGGCC TTGCCCCCAT CCGTCTCTGC ACAGCCCAGG TGGGTCCGAG CCAGCCCCAG GTCTCCAGGG TCCCAGCCCA 000240 000241 GCCTCTAGAA GAGCCAGCAG CAGGGCTGGA AGGGAGAGCA CATGCTGGGC CTTGGGGCTG CCTTGGACCT CAGGCCGTTG 000320 000321 ACAAGGAAAA GCGGAGAGTT GGGAAAAAAG GACAAATAGC TGAGCGCCAG CCGCAGTCTG GGGGACGGGA GCCTCGTGCG 000400 000401 ACTCTCGGAG TGCTGGCCAG ATTGGCAGAG GGGAGGAGAG AGGAAAAACC CAGGCTCTGA GGAAAAACCT CTCCAGCCCA 000480 000481 GCGCGTGGCC TGGCATTAAC CCACTGCAGC CCCAGGAAGT GGTTCCACCC CAGGCAGCCA ACAAGGCGGT GCCTGAACTA 000560 000561 TGTCTGTGGA TGACGGAGCC ACGACCTGTC CCTCAGGGCT CAGCGCTGCG GCTATGTCCA GGGACCCCTG GCTGTGCCCA 000640 000641 CGTCGGGGCT TCCCGTTCCT TACCTGCCAT GAGAATGAGA TGTCCAGGGA CCTCCCTGCT CCAGCTGGGA CCTGTGGGGC 000720 000721 TTTGTCTGTT GTCCCGAGCA CCTTGGAGAT GTCATTTCTA ACATTTTAAC CCAGGAATCC CCCCACCAAG GGACAGAGTG 000800 000801 CAAGGACATG ATCGAACAGA AAAAGTTCTG GTACAAGATC AACCCCGTGG GGTGGTGAGT GCTGCAGCCC CGGGCCTCAC 000880 000881 ATCCTGCCGT CCCTGTGGGA GATTGGAGCG GTCCCAGTGC CCACCGCTGA TTCTCTGGCT CCAGCAACCC CTCCAGGTGG 000960 000961 ATCCGTCCCA CGCAGCCTGG CCTGAAACAC TGCCCAGCCA CTGGGTCCAG TAAGACAGAG CCTCGAGTCA TTCTGCCAAG 001040 001041 AGGATCCAGA AACACAGACT TTTTCTGGGG TCCTGGAGGC TTCTGGCCCA TGGGGAGCCC CTGGGTCCCA GCGATCCAGC 001120 001121 CCTGATGTGC TGAGGGTGCA GGGCCCAGCT GCAGAGCAGA GGAGAGTGGC CCCCAGGGAC CAGCAGCACG AAAGGCACAC 001200 001201 TGAGGCACAC TGGCAGGCCT GGGCTGCAGA GAGCCTGAAG GTCATGGGGT AGCTGGTGGA AGCAGGAAGA CCCCATACAG 001280 001281 CAGCGACCAC TGAGGCTGGT GCTGCACTTT CTCAGGGAAT TGAGTGTGGG CTCCCACCAT CCCGGCCACT GGCTTCCTCC 001360 001361 AAAGCCTCCT CCTCTTACAT CAGCAAACCT TCTGTTCGGT GACCCCCTCA GTGACCCTCT GTGCTTGCCT TCGTGGTCTT 001440 001441 CCTCATGGAG GATTTCGGGT CAGCGTGGGG GTCAGAGGTC ATTTCCCATA CCCCCTCAAA GGTACTTCTT GCTGTGGTCC 001520 001521 CCACACTCTG ACACCCTCTT CTGAAATGAA CACTTTTTTG TTGTTGTTGT TGAGACAGAG TCTTGCTCTG TCGCCCAGGC 001600 001601 TGGAGTGCAG TGGCACAATC TTAGCTCACT GCAACCTCCA CCTCCCAGGT TCAAGCGATT TTCATGCCTC AGCTTCCCGA 001680 001681 GTAGCTGGGA TTACAGGCAT GTGCCACCAA GCCCAGCTAA TTTTTGTATT TTTAGTAGAG ATGAGGTTTC ACCATGTTGG 001760 001761 CCAGGCTGGT CTCGAACTTC TGACCTCAAG TGATTCGCCC GCCTCGGCCT CCCAAAGTGC TGGGATTACA AGCATGAGCC 001840 001841 ACTGCGCCCG GCCACAAACA CTTTTTTTTT TTTAAACAAG TGAAAACAAG TTTATTAACA AAGTTAAGAA ATAAAGAATG 001920 001921 GCTATTCCAT AGGGAGAGCA GCCTGAATAA ACACTTTTTT TGTTGTTGTT GAGGCAGAGC CTCACTCTGT CGCCCAGGCA 002000 002001 GGAGTGCAGT GGTGCGACCT CAGCTCTCAG CTCCCTGCAC CGTCCACCTC CTGGGTTCAA GCGCTTCTTC CCCAAGTAGC 002080 002081 TGGGACTATA GGCACACACC ACCATGCCCG GCTAATTTTT CTCTTTTTAG TAGAGACAGG ATTTCGCCAT GTGGGTCGGG 002160 002161 CTGGTCTCGA ACTCCTGGTC TCAAGTGATC CGCCCTCCTC GGCCTTCCAA AATGCTAGGA TTACAGGCAT GAGCCGCCGT 002240 002241 GCCTGGCCAC AAACATATTT TAAATTTGAA CAATAAAGGA ACTGGACCAG GAAGTGTGGA GTTGGGGAGA CCCTGCTCTC 002320 002321 GCCAGGTGCC TTCCCGGCAG GTTGTCTCTG CCTCCCCTTG CACCCCTTGA ATGGCGGGCT CCCTCTCCCA TAGCCCCTGC 002400 002401 CAGGCTGGAT AACCAACTTC ATTCTTATAC CCGTCCGAAT CTGCCCCCTG TTAATGGCAC CCACCAGTCC TTGTCCAAAC 002480 002481 CTCGAAGCTC AGGACCTCAC AGAGCACCA |