Difference between revisions of "NONHSAT031812"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>tgtgatcacaggcaactcaggaacagctctccagccccaggacttctgctggaaccgctgggagttggaagctttcttcccactgaggggcaaaccttctaggtatctgaagatgttgaagaccatttCCTGGAACAGCAGAGGTAAATGCCCAGAGGATGAGAACACATAGCCATTAGGAGAGCCTGAAAGTTCAGTGTGACTGAAAGATGAAGTTCAAGAGAAGGGACAAACTGCAAAACACAAGCTGGAGAGTTTTAGAGAGACTGTGGAATGGAATGACTCTCCAGAGCTGCAGATTGAAGGCATATTTTCATCTGACTTTGGTGATTATGTTTCCAATCTCTCTGGGAATAAGatctcaatggcgggaacaccttcatggcccctttatagctggatgatcatttcctgttctctccaccatggccacctggtccaagccaccatcttcatgcacctggatacctgccataacctcagctgacctttcctgtgtccattcttgttcctttgggcccagtctcctcg</dnaseq>| | sequence = <dnaseq>tgtgatcacaggcaactcaggaacagctctccagccccaggacttctgctggaaccgctgggagttggaagctttcttcccactgaggggcaaaccttctaggtatctgaagatgttgaagaccatttCCTGGAACAGCAGAGGTAAATGCCCAGAGGATGAGAACACATAGCCATTAGGAGAGCCTGAAAGTTCAGTGTGACTGAAAGATGAAGTTCAAGAGAAGGGACAAACTGCAAAACACAAGCTGGAGAGTTTTAGAGAGACTGTGGAATGGAATGACTCTCCAGAGCTGCAGATTGAAGGCATATTTTCATCTGACTTTGGTGATTATGTTTCCAATCTCTCTGGGAATAAGatctcaatggcgggaacaccttcatggcccctttatagctggatgatcatttcctgttctctccaccatggccacctggtccaagccaccatcttcatgcacctggatacctgccataacctcagctgacctttcctgtgtccattcttgttcctttgggcccagtctcctcg</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG012695]] |
Revision as of 09:32, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT031812 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
531 nt |
| Genomic location |
chr12-:127214381..127221472 |
| Exon number |
4 |
| Exons |
127214381..127214512,127215309..127215349,127216857..127216953,127221212..127221472 |
| Genome context |
|
| Sequence |
000001 tgtgatcaca ggcaactcag gaacagctct ccagccccag gacttctgct ggaaccgctg ggagttggaa gctttcttcc 000080
000081 cactgagggg caaaccttct aggtatctga agatgttgaa gaccatttCC TGGAACAGCA GAGGTAAATG CCCAGAGGAT 000160 000161 GAGAACACAT AGCCATTAGG AGAGCCTGAA AGTTCAGTGT GACTGAAAGA TGAAGTTCAA GAGAAGGGAC AAACTGCAAA 000240 000241 ACACAAGCTG GAGAGTTTTA GAGAGACTGT GGAATGGAAT GACTCTCCAG AGCTGCAGAT TGAAGGCATA TTTTCATCTG 000320 000321 ACTTTGGTGA TTATGTTTCC AATCTCTCTG GGAATAAGat ctcaatggcg ggaacacctt catggcccct ttatagctgg 000400 000401 atgatcattt cctgttctct ccaccatggc cacctggtcc aagccaccat cttcatgcac ctggatacct gccataacct 000480 000481 cagctgacct ttcctgtgtc cattcttgtt cctttgggcc cagtctcctc g |
Predicted Small Protein
| Name | NONHSAT031812_smProtein_209:403 |
| Length | 65 |
| Molecular weight | 7714.0826 |
| Aromaticity | 0.125 |
| Instability index | 52.978125 |
| Isoelectric point | 11.3283081055 |
| Runs | 11 |
| Runs residual | 0.02328125 |
| Runs probability | 0.0767773120715 |
| Amino acid sequence | MKFKRRDKLQNTSWRVLERLWNGMTLQSCRLKAYFHLTLVIMFPISLGIRSQWREHLHGP FIAG |
| Secondary structure | LLLLLHHHHLLLHHHHHHHHHHLLLHHHHHHHHHHHLEEEEEEELLLLLHHHHHHHHLLL LLLL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLLL |
| PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooo oooo |
