Difference between revisions of "Lnc-RASA1-3:19"

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sequence = <dnaseq>AAGGACTTTACAGCTTCTCTTTCGCATATCCAAATTGCCAGCATCACCGCTCTTGCACTCCAAGCCATTATTAAGTAAAGTAAAGAACACAAACACTGTGATACTGCTACACTTGATCTGATAACCAAGAAGTCTACTAAGTGACTAACAGAGCAACTGGGAACCTAATTCTGACCAAAAAGGAGGAATTGTTTGGCTAATTGGAAGTGACAGAAACCTTGGGAGAAAGCAACCGCATACCAAGGATAATTATAAGAAGAAGAGAAGACATGGAGAAGAGGAGGGAGTAGTTGTGACCGTGGAGGCAGAGAATGGAGTAATGTGATCATAAATCAAGGAATGCTGACAGCCACTAAAGCTGGAGAAGGCCAAGGACAGATATTCAATCCTCCCGTAGAAGTACAGCCCTGCTAATGCATTGATTTTGGACTTCTGGCCTCAGAACTGTAAGAGAATAAATTTCTATTGTTTTAAGCCTTCAGTTTGTGGTAGTTTGTTACAGAAACCCTGTAAAGTTAATACACAGAGTTCAAAGAGAATCCGGTAATATCTCTAAAAGACTCGTGTATTAGTCAGGATTCTCCAGAGAAGCAAAGCCAATAGAATGATACATGTTGTTAAAGCAAATTAAAATGGAGACCATGCCTGAAGAATCTCTGTGCAGAGAAACCCAGTTAGGCCTCATAAGTTAACCTTACTTGATTTGCAAACATAATCTAAAAGTTAACTGGAGCTATTTCCGGTAAATGAATATAACACAACTTAAGCTCAATCAGTCAGAAGCAGCTTTATAATTATGTAGCTAGGGACTTTCCAAGAGGATGACCAAAGAAGGAAATGATATAACTATAACCAAATAAATATTTTCTTTGCTTTCCTGTTCCTCCTATAAAAGCCTCCCCACTGCTGAGCTGTGCTCAGCAGAGCTCCGAAACAACTTCTGGTTTAGAGTTGCCCGATTTGTGAATCACTGTTTGCTCAAATAAACTCTTTAAAATTTTATTGTATCTCAGGTTATCTTTTTTAGATAGATAGATGATATATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAATAGATAGATAGATAGATTATTTATTATGGGAATTGGCTCAATCACAGAGACCCAAGATCTGCCGTCTGCAAACTGGAGAACCAGGAAAGCCAGTGGTGTAATCAAGTTCAAAGGGCTGAGAACCAGGAGAATCAATAACTTAATACCCAATGTAATAAGGCCTGAGAATGTGGGGTAGGGATGCTAGTATAAGTCCTAGAGTCTGACTACTGCAGAACCAGGAGTTCTGATGTCCAAGGGTAGGAGAAGATGGAGGTCCTAAATCAAGAATAAAGCAAATTCACCTTTTCTTTGCCCTTTTTGTTCTATTTGGGCAGGCCTCCAGTGAATTGGATGATGCCCACCCACACTGGTAGAGCAGATCTTTAGTCAGTCTTGATTCAAATGCTAATTTCTTCACAGAGGCACACAGAAATACTGTTTTATCATCTATCTGGATAGCCCTTAACACAGCCAAG</dnaseq>|
 
sequence = <dnaseq>AAGGACTTTACAGCTTCTCTTTCGCATATCCAAATTGCCAGCATCACCGCTCTTGCACTCCAAGCCATTATTAAGTAAAGTAAAGAACACAAACACTGTGATACTGCTACACTTGATCTGATAACCAAGAAGTCTACTAAGTGACTAACAGAGCAACTGGGAACCTAATTCTGACCAAAAAGGAGGAATTGTTTGGCTAATTGGAAGTGACAGAAACCTTGGGAGAAAGCAACCGCATACCAAGGATAATTATAAGAAGAAGAGAAGACATGGAGAAGAGGAGGGAGTAGTTGTGACCGTGGAGGCAGAGAATGGAGTAATGTGATCATAAATCAAGGAATGCTGACAGCCACTAAAGCTGGAGAAGGCCAAGGACAGATATTCAATCCTCCCGTAGAAGTACAGCCCTGCTAATGCATTGATTTTGGACTTCTGGCCTCAGAACTGTAAGAGAATAAATTTCTATTGTTTTAAGCCTTCAGTTTGTGGTAGTTTGTTACAGAAACCCTGTAAAGTTAATACACAGAGTTCAAAGAGAATCCGGTAATATCTCTAAAAGACTCGTGTATTAGTCAGGATTCTCCAGAGAAGCAAAGCCAATAGAATGATACATGTTGTTAAAGCAAATTAAAATGGAGACCATGCCTGAAGAATCTCTGTGCAGAGAAACCCAGTTAGGCCTCATAAGTTAACCTTACTTGATTTGCAAACATAATCTAAAAGTTAACTGGAGCTATTTCCGGTAAATGAATATAACACAACTTAAGCTCAATCAGTCAGAAGCAGCTTTATAATTATGTAGCTAGGGACTTTCCAAGAGGATGACCAAAGAAGGAAATGATATAACTATAACCAAATAAATATTTTCTTTGCTTTCCTGTTCCTCCTATAAAAGCCTCCCCACTGCTGAGCTGTGCTCAGCAGAGCTCCGAAACAACTTCTGGTTTAGAGTTGCCCGATTTGTGAATCACTGTTTGCTCAAATAAACTCTTTAAAATTTTATTGTATCTCAGGTTATCTTTTTTAGATAGATAGATGATATATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAATAGATAGATAGATAGATTATTTATTATGGGAATTGGCTCAATCACAGAGACCCAAGATCTGCCGTCTGCAAACTGGAGAACCAGGAAAGCCAGTGGTGTAATCAAGTTCAAAGGGCTGAGAACCAGGAGAATCAATAACTTAATACCCAATGTAATAAGGCCTGAGAATGTGGGGTAGGGATGCTAGTATAAGTCCTAGAGTCTGACTACTGCAGAACCAGGAGTTCTGATGTCCAAGGGTAGGAGAAGATGGAGGTCCTAAATCAAGAATAAAGCAAATTCACCTTTTCTTTGCCCTTTTTGTTCTATTTGGGCAGGCCTCCAGTGAATTGGATGATGCCCACCCACACTGGTAGAGCAGATCTTTAGTCAGTCTTGATTCAAATGCTAATTTCTTCACAGAGGCACACAGAAATACTGTTTTATCATCTATCTGGATAGCCCTTAACACAGCCAAG</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-RASA1-3]]

Revision as of 09:42, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-RASA1-3:19

Source

LNCipedia2.1

Same with

NONHSAT102637

Classification

intergenic

Length

1547 nt

Genomic location

chr5+:87578533..87584540

Exon number

3

Exons

87578533..87578683,87581561..87581668,87583253..87584540

Genome context

Sequence
000001 AAGGACTTTA CAGCTTCTCT TTCGCATATC CAAATTGCCA GCATCACCGC TCTTGCACTC CAAGCCATTA TTAAGTAAAG 000080
000081 TAAAGAACAC AAACACTGTG ATACTGCTAC ACTTGATCTG ATAACCAAGA AGTCTACTAA GTGACTAACA GAGCAACTGG 000160
000161 GAACCTAATT CTGACCAAAA AGGAGGAATT GTTTGGCTAA TTGGAAGTGA CAGAAACCTT GGGAGAAAGC AACCGCATAC 000240
000241 CAAGGATAAT TATAAGAAGA AGAGAAGACA TGGAGAAGAG GAGGGAGTAG TTGTGACCGT GGAGGCAGAG AATGGAGTAA 000320
000321 TGTGATCATA AATCAAGGAA TGCTGACAGC CACTAAAGCT GGAGAAGGCC AAGGACAGAT ATTCAATCCT CCCGTAGAAG 000400
000401 TACAGCCCTG CTAATGCATT GATTTTGGAC TTCTGGCCTC AGAACTGTAA GAGAATAAAT TTCTATTGTT TTAAGCCTTC 000480
000481 AGTTTGTGGT AGTTTGTTAC AGAAACCCTG TAAAGTTAAT ACACAGAGTT CAAAGAGAAT CCGGTAATAT CTCTAAAAGA 000560
000561 CTCGTGTATT AGTCAGGATT CTCCAGAGAA GCAAAGCCAA TAGAATGATA CATGTTGTTA AAGCAAATTA AAATGGAGAC 000640
000641 CATGCCTGAA GAATCTCTGT GCAGAGAAAC CCAGTTAGGC CTCATAAGTT AACCTTACTT GATTTGCAAA CATAATCTAA 000720
000721 AAGTTAACTG GAGCTATTTC CGGTAAATGA ATATAACACA ACTTAAGCTC AATCAGTCAG AAGCAGCTTT ATAATTATGT 000800
000801 AGCTAGGGAC TTTCCAAGAG GATGACCAAA GAAGGAAATG ATATAACTAT AACCAAATAA ATATTTTCTT TGCTTTCCTG 000880
000881 TTCCTCCTAT AAAAGCCTCC CCACTGCTGA GCTGTGCTCA GCAGAGCTCC GAAACAACTT CTGGTTTAGA GTTGCCCGAT 000960
000961 TTGTGAATCA CTGTTTGCTC AAATAAACTC TTTAAAATTT TATTGTATCT CAGGTTATCT TTTTTAGATA GATAGATGAT 001040
001041 ATATGATAGA TAGATAGATA GATAGATAGA TAGATAGATA GATAGATAAT AGATAGATAG ATAGATTATT TATTATGGGA 001120
001121 ATTGGCTCAA TCACAGAGAC CCAAGATCTG CCGTCTGCAA ACTGGAGAAC CAGGAAAGCC AGTGGTGTAA TCAAGTTCAA 001200
001201 AGGGCTGAGA ACCAGGAGAA TCAATAACTT AATACCCAAT GTAATAAGGC CTGAGAATGT GGGGTAGGGA TGCTAGTATA 001280
001281 AGTCCTAGAG TCTGACTACT GCAGAACCAG GAGTTCTGAT GTCCAAGGGT AGGAGAAGAT GGAGGTCCTA AATCAAGAAT 001360
001361 AAAGCAAATT CACCTTTTCT TTGCCCTTTT TGTTCTATTT GGGCAGGCCT CCAGTGAATT GGATGATGCC CACCCACACT 001440
001441 GGTAGAGCAG ATCTTTAGTC AGTCTTGATT CAAATGCTAA TTTCTTCACA GAGGCACACA GAAATACTGT TTTATCATCT 001520
001521 ATCTGGATAG CCCTTAACAC AGCCAAG
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