Difference between revisions of "NONHSAT127069"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>GGCTACAAACCTCCTGATGAAGGACCTTCTGAGTACCAGACTATTCCACTTAATAAAATAGAAGATTTTGGTGTACACTGCAAACAATATTATGCCTTAGAAGTCTCATATTTCAAATCCTCTTTGGATCGCAAATTGCTTGAGCTGTTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAAGTTGGAAATAATACCTAAACCTACTTCTTGACATGGTGTCAAAACAGAGCTTTTGCTGAGAGTTTGATTTATAAAGAAATTATGGTTCGACTGACCTTGGATCTAATTGCCAGAAACAGCAATCTTAAACCCCGAAAAGAAGAAACCATTTCACAGTGCCTGAAGAAAATAACTCATATAAATTTTTCAGACAAAAATATAGATGCAATTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAGTAAGTTCACATTTGAATATTTTGACAAGGAATATAGTGATTAACAAGTTATAATGAAAC</dnaseq>|
 
sequence = <dnaseq>GGCTACAAACCTCCTGATGAAGGACCTTCTGAGTACCAGACTATTCCACTTAATAAAATAGAAGATTTTGGTGTACACTGCAAACAATATTATGCCTTAGAAGTCTCATATTTCAAATCCTCTTTGGATCGCAAATTGCTTGAGCTGTTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAAGTTGGAAATAATACCTAAACCTACTTCTTGACATGGTGTCAAAACAGAGCTTTTGCTGAGAGTTTGATTTATAAAGAAATTATGGTTCGACTGACCTTGGATCTAATTGCCAGAAACAGCAATCTTAAACCCCGAAAAGAAGAAACCATTTCACAGTGCCTGAAGAAAATAACTCATATAAATTTTTCAGACAAAAATATAGATGCAATTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAGTAAGTTCACATTTGAATATTTTGACAAGGAATATAGTGATTAACAAGTTATAATGAAAC</dnaseq>|
 
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[[Category:Sense]]
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[[Category:Sense]][[Category:NONHSAG050426]]

Revision as of 09:51, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT127069

Source

NONCODE4.0

Same with

,

Classification

sense

Length

610 nt

Genomic location

chr8-:67925133..67968839

Exon number

4

Exons

67925133..67925331,67929854..67930066,67963465..67963576,67968754..67968839

Genome context

Sequence
000001 GGCTACAAAC CTCCTGATGA AGGACCTTCT GAGTACCAGA CTATTCCACT TAATAAAATA GAAGATTTTG GTGTACACTG 000080
000081 CAAACAATAT TATGCCTTAG AAGTCTCATA TTTCAAATCC TCTTTGGATC GCAAATTGCT TGAGCTGTTG TGGAATAAAT 000160
000161 ACTGGGTGAA TACGTTGAGT TCTTCTAGCT TGCTTACTAA AGTTGGAAAT AATACCTAAA CCTACTTCTT GACATGGTGT 000240
000241 CAAAACAGAG CTTTTGCTGA GAGTTTGATT TATAAAGAAA TTATGGTTCG ACTGACCTTG GATCTAATTG CCAGAAACAG 000320
000321 CAATCTTAAA CCCCGAAAAG AAGAAACCAT TTCACAGTGC CTGAAGAAAA TAACTCATAT AAATTTTTCA GACAAAAATA 000400
000401 TAGATGCAAT TGTATCTGGG AGGCAATTAC ATTGCTGTCA TAGAAGGTTT AGAAGGATTA GGAGAACTAA GAGAGCTTCA 000480
000481 TGTTGAGAAT CAGAGGCTTC CCCTTGGGGA AAAGCTTCTG TTTGATCCAA GAACTCTTCA TTCTCTGGCA GTAAGTTCAC 000560
000561 ATTTGAATAT TTTGACAAGG AATATAGTGA TTAACAAGTT ATAATGAAAC
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Predicted Small Protein

Name NONHSAT127069_smProtein_479:553
Length 25
Molecular weight 2909.5575
Aromaticity 0.166666666667
Instability index 52.5
Isoelectric point 9.49639892578
Runs 5
Runs residual 0.0267857142857
Runs probability 0.0380321497969
Amino acid sequence MLRIRGFPLGKSFCLIQELFILWQ
Secondary structure LLEEELLLLLHHHHHHHHHHHHHL
PRMN -
PiMo -