Difference between revisions of "NONHSAT062968"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GCCGCCCAAGCCCTGGGGTGACCGAATCCCCGCGGGGACTCGTCATGCCGGGCCGTCGCCTCCGTTGCTCTCGCTCTAACTGGGGGCGCCTTGCCCGCCGAGCCTGCACGGAGGCGGCCCCTTCCTCTCTCGCCCTCCGAGGCGGGGGAGGGGGGCGGGGGGGGCTCTGTTCGCCCCTCCCCGGCTCCCTGCCGACCTTGGCGTCTCCAGGAAACGCCGGAGCGCCCAGCCCATCGCCATGGCAACGCGGGCCGGGCCGGCTCCTCTTCAGGGATGATTGACGTAGGGGAGTGCTGCAGCCGCCCCCAGCCCCGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCTCCATGGCGGCTGGCTTCTTCCAGCCCTTCATGTCACCGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTCCTCCCTGGCGCCATGGAGCCCTCCCCACGAGCCCAGGGGCATCCGAGCATGGGCGGCCCAATGCAGAGGGTGACGCCTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCCGGCCCAGGCCTGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCATCCCCCGGCAGCTACACCGTA</dnaseq>| | sequence = <dnaseq>GCCGCCCAAGCCCTGGGGTGACCGAATCCCCGCGGGGACTCGTCATGCCGGGCCGTCGCCTCCGTTGCTCTCGCTCTAACTGGGGGCGCCTTGCCCGCCGAGCCTGCACGGAGGCGGCCCCTTCCTCTCTCGCCCTCCGAGGCGGGGGAGGGGGGCGGGGGGGGCTCTGTTCGCCCCTCCCCGGCTCCCTGCCGACCTTGGCGTCTCCAGGAAACGCCGGAGCGCCCAGCCCATCGCCATGGCAACGCGGGCCGGGCCGGCTCCTCTTCAGGGATGATTGACGTAGGGGAGTGCTGCAGCCGCCCCCAGCCCCGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCTCCATGGCGGCTGGCTTCTTCCAGCCCTTCATGTCACCGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTCCTCCCTGGCGCCATGGAGCCCTCCCCACGAGCCCAGGGGCATCCGAGCATGGGCGGCCCAATGCAGAGGGTGACGCCTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCCGGCCCAGGCCTGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCATCCCCCGGCAGCTACACCGTA</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG025131]] |
Revision as of 10:20, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT062968 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
733 nt |
Genomic location |
chr19+:18539902..18543548 |
Exon number |
8 |
Exons |
18539902..18540190,18541651..18541740,18542457..18542516,18542603..18542672,18542810..18542880,18542957..18543024,18543369..18543414,18543510..18543548 |
Genome context |
|
Sequence |
000001 GCCGCCCAAG CCCTGGGGTG ACCGAATCCC CGCGGGGACT CGTCATGCCG GGCCGTCGCC TCCGTTGCTC TCGCTCTAAC 000080
000081 TGGGGGCGCC TTGCCCGCCG AGCCTGCACG GAGGCGGCCC CTTCCTCTCT CGCCCTCCGA GGCGGGGGAG GGGGGCGGGG 000160 000161 GGGGCTCTGT TCGCCCCTCC CCGGCTCCCT GCCGACCTTG GCGTCTCCAG GAAACGCCGG AGCGCCCAGC CCATCGCCAT 000240 000241 GGCAACGCGG GCCGGGCCGG CTCCTCTTCA GGGATGATTG ACGTAGGGGA GTGCTGCAGC CGCCCCCAGC CCCGTTATGG 000320 000321 GGAGTATGGC CCCAGGTGAC ACAATGGCCG CAGGCTCCAT GGCGGCTGGC TTCTTCCAGC CCTTCATGTC ACCGCGCTTC 000400 000401 CCAGGGGGCC CCCGGCCCAC CCTGCGGATG CCGAGTCAGC CTCCCGCAGG CCTCCCTGGC TCCCAGCCCC TCCTCCCTGG 000480 000481 CGCCATGGAG CCCTCCCCAC GAGCCCAGGG GCATCCGAGC ATGGGCGGCC CAATGCAGAG GGTGACGCCT CCTCGTGGCA 000560 000561 TGGCCAGCGT GGGGCCCCAG AGCTATGGAG GTGGCATGCG ACCCCCACCC AACTCCCTCG CCGGCCCAGG CCTGCCTGCC 000640 000641 ATGAACATGG GCCCAGGAGT TCGTGGCCCG TGGGCCAGCC CCAGTGGAAA CTCGATCCCC TACTCCTCCT CATCCCCCGG 000720 000721 CAGCTACACC GTA |
Predicted Small Protein
Name | NONHSAT062968_smProtein_44:280 |
Length | 79 |
Molecular weight | 8024.0581 |
Aromaticity | 0.0384615384615 |
Instability index | 97.2423076923 |
Isoelectric point | 11.8545532227 |
Runs | 11 |
Runs residual | 0.0073483427142 |
Runs probability | 0.0282555282556 |
Amino acid sequence | MPGRRLRCSRSNWGRLARRACTEAAPSSLALRGGGGGRGGLCSPLPGSLPTLASPGNAGA PSPSPWQRGPGRLLFRDD |
Secondary structure | LLLLEEELLLLLHHHHHHHHHHHLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLEELEELL |
PRMN | - |
PiMo | - |