Difference between revisions of "NONHSAT087716"

Revision as of 10:33, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	NONHSAT087716
Source	NONCODE4.0
Same with	,
Classification	intergenic
Length	2887 nt
Genomic location	chr3+:8613468..8616354
Exon number	1
Exons	8613468..8616354
Genome context
Sequence	000001 TTTTCTTTTG ATAGAATGTC AAACTTACGA AAAAAGTTAC AAGAAGAGAA CAAAgagcta ttagagggtg ttgctgacac 000080 000081 aatgctttat cactcttgaa tattttcgtg tgtaattcct acaaataagg acattctccc acatagccac aatacaacca 000160 000161 tcaaaatcag gaagttaacg ctgatgtgtt tctaccatgt aatcctcaga tccaattcaa gtgtcaccag ctgtcccaat 000240 000241 aatgtctttt ataacaaaaa cattcagtct aagatcactc attctattta gttatcttgt ctattcttca atttggaagt 000320 000321 gttctttgtt ctttcctgaa tgttcatgac cttgacatct tagaagatta aaggttattt aaagttgttg agttaaatat 000400 000401 ccattaaatt aggtttgtca gatatttcct cgaaattaga ttcagcttat gcattttttg gaaggaatac cacagaagtg 000480 000481 atgttgtttt ctttctgttg catccaatca gatgatacag gattttgatt tgttccatta ctgttgacat gaattttgaa 000560 000561 catttgataa tgccagtatc agccagattt ttccattgta aagtcattcc tttgtccttt gtatttaata agtatgttta 000640 000641 gggactttga gactatgtca atgtcctgtt cttcatcaaa attccactca ctcattctta gtattcattg acgtttactg 000720 000721 atcgaactaa ttattattat gatagttgcc aaatgttggt ttttctaatt caatcatttc tttagtgttt attagcattc 000800 000801 tactataagg aaaagcacta tcttctcccc atttattaat tcacatattt acatcagctt ggagttattg atttctattt 000880 000881 tattaaatag tttataattg attaccatcc ttatttattt taatgctcaa attgtcccaa attatggcca aagaaagctc 000960 000961 cttcaaactg gttgctatgt ccttttgaca tggcccatca ttctttaaac acattttaca tctggcacaa taacgtgcta 001040 001041 catacccatc ttgtattttt cctgccccat ctttgaaatc agccattctc aaggggttcc ttcttaatCT GGCTGTTGTT 001120 001121 GTGTTGGAAC TCCTGGTACC ATCTTAGAAC CTTAAGGAGA CAAGCGAACC AAGCCAATAA GCTTTCCATG ATGCTGCTTA 001200 001201 GAGTTAAACA GAGCCCAGGT ACTAAGTTAT GTCATGGAGA CAGTGAACTA ACCTCTGGAC TGCTTGCTAC ATGAGACAAT 001280 001281 TGATTTTCTT ATTTTCTATG TAGGGTGGTA CATTTCCTCA TTTTGAGATA TTTCTTCAAC ATATAGCTTT TCATTAGTGG 001360 001361 GGATTTTGTC AATTATAACC AAAAACAATG TGACGGATAC CCAAGATGTT TCATGTTGTA GCTTGGGTGA ATTACACATT 001440 001441 TCTGAAGCCA TTACACTTCC TAGTTTATTT GGAtttaagt tgacaaataa aaattgcata tgtttatggt ctataacatg 001520 001521 gtgtttcgat atatgtatac atcgtggaat ggctaaatca agctaacata tccattacct cacatagtta ttttttgtgg 001600 001601 tgagaacatt ttaaaaatat tgtcttagca attttcaaTC AAGCCTGTCC CATGGAGACA CAAGCAATAG TGACATGAGC 001680 001681 ACTTGACTCG CTGGGTTATC AGGCTTTGGC TCCAAATGTT TGGCTTCAAA TATGAAAAAG TTACATGAAA GATGAAACTA 001760 001761 TGCAATGGCA TGGCTGTTGG TCATTCACAT CTCTCTCTGC CAAGAATGGG GATGACGCTG TTGAAGGAAG AAATGTGTTT 001840 001841 TCTCCTTTTT CTCAAGTGAT ATTTGCCTTA GGTCAGATTC TACTAGTTTA AAGCAAAACG ATCTCCTGGT CTGATTCCTT 001920 001921 TGGGTCTCTA ATAATGGAAA CTGCAAGGAT CAGCATAAAG TG

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>TTTTCTTTTGATAGAATGTCAAACTTACGAAAAAAGTTACAAGAAGAGAACAAAgagctattagagggtgttgctgacacaatgctttatcactcttgaatattttcgtgtgtaattcctacaaataaggacattctcccacatagccacaatacaaccatcaaaatcaggaagttaacgctgatgtgtttctaccatgtaatcctcagatccaattcaagtgtcaccagctgtcccaataatgtcttttataacaaaaacattcagtctaagatcactcattctatttagttatcttgtctattcttcaatttggaagtgttctttgttctttcctgaatgttcatgaccttgacatcttagaagattaaaggttatttaaagttgttgagttaaatatccattaaattaggtttgtcagatatttcctcgaaattagattcagcttatgcattttttggaaggaataccacagaagtgatgttgttttctttctgttgcatccaatcagatgatacaggattttgatttgttccattactgttgacatgaattttgaacatttgataatgccagtatcagccagatttttccattgtaaagtcattcctttgtcctttgtatttaataagtatgtttagggactttgagactatgtcaatgtcctgttcttcatcaaaattccactcactcattcttagtattcattgacgtttactgatcgaactaattattattatgatagttgccaaatgttggtttttctaattcaatcatttctttagtgtttattagcattctactataaggaaaagcactatcttctccccatttattaattcacatatttacatcagcttggagttattgatttctattttattaaatagtttataattgattaccatccttatttattttaatgctcaaattgtcccaaattatggccaaagaaagctccttcaaactggttgctatgtccttttgacatggcccatcattctttaaacacattttacatctggcacaataacgtgctacatacccatcttgtatttttcctgccccatctttgaaatcagccattctcaaggggttccttcttaatCTGGCTGTTGTTGTGTTGGAACTCCTGGTACCATCTTAGAACCTTAAGGAGACAAGCGAACCAAGCCAATAAGCTTTCCATGATGCTGCTTAGAGTTAAACAGAGCCCAGGTACTAAGTTATGTCATGGAGACAGTGAACTAACCTCTGGACTGCTTGCTACATGAGACAATTGATTTTCTTATTTTCTATGTAGGGTGGTACATTTCCTCATTTTGAGATATTTCTTCAACATATAGCTTTTCATTAGTGGGGATTTTGTCAATTATAACCAAAAACAATGTGACGGATACCCAAGATGTTTCATGTTGTAGCTTGGGTGAATTACACATTTCTGAAGCCATTACACTTCCTAGTTTATTTGGAtttaagttgacaaataaaaattgcatatgtttatggtctataacatggtgtttcgatatatgtatacatcgtggaatggctaaatcaagctaacatatccattacctcacatagttattttttgtggtgagaacattttaaaaatattgtcttagcaattttcaaTCAAGCCTGTCCCATGGAGACACAAGCAATAGTGACATGAGCACTTGACTCGCTGGGTTATCAGGCTTTGGCTCCAAATGTTTGGCTTCAAATATGAAAAAGTTACATGAAAGATGAAACTATGCAATGGCATGGCTGTTGGTCATTCACATCTCTCTCTGCCAAGAATGGGGATGACGCTGTTGAAGGAAGAAATGTGTTTTCTCCTTTTTCTCAAGTGATATTTGCCTTAGGTCAGATTCTACTAGTTTAAAGCAAAACGATCTCCTGGTCTGATTCCTTTGGGTCTCTAATAATGGAAACTGCAAGGATCAGCATAAAGTGTTCCTTTGTTCTGACGTTGGTATAACATTGCTTCTTGAAAAATGAAAGTATTTGGACATACAGACAGAAGCAAtattattcaggtcttccttgttgcaagtgagggaaatccaattaaaactggtttaaacctaaaaaaaaaaaAAAGAAGAAAAGAAAAGAAAAAATATGAGAGGGGTTTTGCTTTCTGGAATCTGCTTTCTAGTCAGaaagtgcagaagaagggctagcttcaggaacaattggatgcagtagttcaaatcacaagttaagtctctgcttcttttctccatctctcttctgtcttcctccacactggctttattcttaggtaggcttacccagatagtcataaacacagccaccagtggcagctgggctcacttttgtccttggagccagtgagcccatgaaaaaggagcttctctttctggagcttcccaggggtaactttgatcagccaacaagggtcagtcctatgcttatcccttgaccaatctctgtgcccagagggcagggtactctgattggcaataccttcatcgtgggccaaccactgtggggaagggggagggattagaaaagacagccacacccaaatctcatgaaGCAGTCCCCTTTATTTTAAAAAAGTCCCTGTGAGAGCAACAGGAGCAAAGCATGGAGAAGAAGCAATCTTGGAGAAGCTGGAAGAGAACTGACCCAAAGAATCCAAGAGACTAAGACTGTGCAGGGTTGGGGAACGGAAGCTCACACAGGAGGCCTGGACAGAGCTGCAGCAGAGCCAGGAGAGAAGCCAAGTGGCACAGCTCATCTTGAAGTAATTATAATGCCACTAAAATTCTCATTTGTATTAATTTTTTTTAATTACTGGCAAGATAAGGCAAATGTTTTTAAAGGCCTAAATAAAATGATATTCCCTGAA</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:NONHSAG034351]]