Difference between revisions of "NONHSAT065850"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTTTTGACCCCCTTGGTCAGTACGTGCCCAGGAACCATGTTCAATATCATCTTGGATCAAGTGCACTCAGGATGATAAACGTGCTGTGAAACCAACTCCACAGCCTGAATGTCCACAGTCAGACTGGAAAACCTTGGTGATAGCCCTGGTGTGAGCCTGCCCTTGCTGCTGGGCCCTTCATGAGCGTGGAGGCCATGGCAGAGTACAGGGAGGCCATGACCCCACATCACTTTCCTTTGATCTTTTTGCAGGGGGGAGTCTCACCTTCTTCCTCGGTGAGTATGGGGGCCTGATCTTCATCTGGCTGGAGAGAGAAGGGGCCTGAGGCCAGAGGGTATGGAAGGGACCCTGTGGTGGCCACTCAGACTTTCTCTTTTTCTGGCAGGCTTCCCGGGTGCAACCTGGCCTGCTGCAGTGGGTGAAGTTTTGGTAGGTGAGTGTCAGAGTGAGCCGACCCAGGCCACATCCTGGCAGTGGAGGCACAGTCACCCGGGGCAGGGCCAGGATCTTGGTATATCCTCAGATCTCAGTGGGCAGCGACATGAAGTCAGGCAATTTCTTGCAACCACCACCGAGGCCCCGAAAAGCACTGGTCGTCAGGGAGCTCCTCCCCTTGGCCCCCAGCCTGTGCCAGCCCTGGCCCGGCTGCCACACCTCTGTTTCCTAGGCTGGGGACCCAGCTTGTCTCTCCTTGTTTCTTCCCACTGCACTGTGGTGCTTCAGTGGCCACCAGCCTCGTCACATACACCAGC</dnaseq>| | sequence = <dnaseq>CTTTTGACCCCCTTGGTCAGTACGTGCCCAGGAACCATGTTCAATATCATCTTGGATCAAGTGCACTCAGGATGATAAACGTGCTGTGAAACCAACTCCACAGCCTGAATGTCCACAGTCAGACTGGAAAACCTTGGTGATAGCCCTGGTGTGAGCCTGCCCTTGCTGCTGGGCCCTTCATGAGCGTGGAGGCCATGGCAGAGTACAGGGAGGCCATGACCCCACATCACTTTCCTTTGATCTTTTTGCAGGGGGGAGTCTCACCTTCTTCCTCGGTGAGTATGGGGGCCTGATCTTCATCTGGCTGGAGAGAGAAGGGGCCTGAGGCCAGAGGGTATGGAAGGGACCCTGTGGTGGCCACTCAGACTTTCTCTTTTTCTGGCAGGCTTCCCGGGTGCAACCTGGCCTGCTGCAGTGGGTGAAGTTTTGGTAGGTGAGTGTCAGAGTGAGCCGACCCAGGCCACATCCTGGCAGTGGAGGCACAGTCACCCGGGGCAGGGCCAGGATCTTGGTATATCCTCAGATCTCAGTGGGCAGCGACATGAAGTCAGGCAATTTCTTGCAACCACCACCGAGGCCCCGAAAAGCACTGGTCGTCAGGGAGCTCCTCCCCTTGGCCCCCAGCCTGTGCCAGCCCTGGCCCGGCTGCCACACCTCTGTTTCCTAGGCTGGGGACCCAGCTTGTCTCTCCTTGTTTCTTCCCACTGCACTGTGGTGCTTCAGTGGCCACCAGCCTCGTCACATACACCAGC</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG025582]] |
Revision as of 10:44, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT065850 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
752 nt |
Genomic location |
chr19-:35988240..35990050 |
Exon number |
2 |
Exons |
35988240..35988440,35989500..35990050 |
Genome context |
|
Sequence |
000001 CTTTTGACCC CCTTGGTCAG TACGTGCCCA GGAACCATGT TCAATATCAT CTTGGATCAA GTGCACTCAG GATGATAAAC 000080
000081 GTGCTGTGAA ACCAACTCCA CAGCCTGAAT GTCCACAGTC AGACTGGAAA ACCTTGGTGA TAGCCCTGGT GTGAGCCTGC 000160 000161 CCTTGCTGCT GGGCCCTTCA TGAGCGTGGA GGCCATGGCA GAGTACAGGG AGGCCATGAC CCCACATCAC TTTCCTTTGA 000240 000241 TCTTTTTGCA GGGGGGAGTC TCACCTTCTT CCTCGGTGAG TATGGGGGCC TGATCTTCAT CTGGCTGGAG AGAGAAGGGG 000320 000321 CCTGAGGCCA GAGGGTATGG AAGGGACCCT GTGGTGGCCA CTCAGACTTT CTCTTTTTCT GGCAGGCTTC CCGGGTGCAA 000400 000401 CCTGGCCTGC TGCAGTGGGT GAAGTTTTGG TAGGTGAGTG TCAGAGTGAG CCGACCCAGG CCACATCCTG GCAGTGGAGG 000480 000481 CACAGTCACC CGGGGCAGGG CCAGGATCTT GGTATATCCT CAGATCTCAG TGGGCAGCGA CATGAAGTCA GGCAATTTCT 000560 000561 TGCAACCACC ACCGAGGCCC CGAAAAGCAC TGGTCGTCAG GGAGCTCCTC CCCTTGGCCC CCAGCCTGTG CCAGCCCTGG 000640 000641 CCCGGCTGCC ACACCTCTGT TTCCTAGGCT GGGGACCCAG CTTGTCTCTC CTTGTTTCTT CCCACTGCAC TGTGGTGCTT 000720 000721 CAGTGGCCAC CAGCCTCGTC ACATACACCA GC |
Predicted Small Protein
Name | NONHSAT065850_smProtein_179:292 |
Length | 38 |
Molecular weight | 3953.5002 |
Aromaticity | 0.0810810810811 |
Instability index | 59.3378378378 |
Isoelectric point | 5.31585693359 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0442854619326 |
Amino acid sequence | MSVEAMAEYREAMTPHHFPLIFLQGGVSPSSSVSMGA |
Secondary structure | LLHHHHHHHHHHHLLLLLLEEEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |