Difference between revisions of "NONHSAT129852"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTCTGAAGGTGCTGCGGGATGCCGTTCCTTCGCGCGTGAGGCTGCGGCTCTGACGCCCCATAGGCTCCTTCAATTTCCGTGATCCTCGGAGTCCCCAGGAGACCAGGTGATGGCAGCAGCCAGACTCCTGCCAGTGCCGGCAGGACCCCAGGCCAAGCTGACCTTCGAGGATGTGGCTGTGCTCCTCTCCCAGGATGAATGGGACCGCCTGTGCCCTGCTCAGAGGGGTCTCTACAGAAATGTGATGATGGAAACCTATGGGAATGTAGTCTCATTGGGTAAGCCACCTTAGCAGGCCTCGTCTATGTATCTGCGTATTGGACTGGGGTGGGGGCTTCTCAGGGTACGGGGCCTGGGACAGGCTGGTCCTGGAGGTTTGCTCTCATCACCTCTCTGGGTGCTCAGCTCCAGCAGAAGATCAGTCCTGTCCATTTTCATGTCCCCACAAGTGGCTTGGGCAGGGGGAGGGGGCTCTGTAAATGTTGTGTAAACAAAGACTTCCCTCCCCACGAGCAGGACTTCCA</dnaseq>| | sequence = <dnaseq>GTCTGAAGGTGCTGCGGGATGCCGTTCCTTCGCGCGTGAGGCTGCGGCTCTGACGCCCCATAGGCTCCTTCAATTTCCGTGATCCTCGGAGTCCCCAGGAGACCAGGTGATGGCAGCAGCCAGACTCCTGCCAGTGCCGGCAGGACCCCAGGCCAAGCTGACCTTCGAGGATGTGGCTGTGCTCCTCTCCCAGGATGAATGGGACCGCCTGTGCCCTGCTCAGAGGGGTCTCTACAGAAATGTGATGATGGAAACCTATGGGAATGTAGTCTCATTGGGTAAGCCACCTTAGCAGGCCTCGTCTATGTATCTGCGTATTGGACTGGGGTGGGGGCTTCTCAGGGTACGGGGCCTGGGACAGGCTGGTCCTGGAGGTTTGCTCTCATCACCTCTCTGGGTGCTCAGCTCCAGCAGAAGATCAGTCCTGTCCATTTTCATGTCCCCACAAGTGGCTTGGGCAGGGGGAGGGGGCTCTGTAAATGTTGTGTAAACAAAGACTTCCCTCCCCACGAGCAGGACTTCCA</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG051583]] |
Revision as of 10:55, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT129852 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
524 nt |
| Genomic location |
chr8-:146115072..146126838 |
| Exon number |
3 |
| Exons |
146115072..146115444,146115693..146115788,146126784..146126838 |
| Genome context |
|
| Sequence |
000001 GTCTGAAGGT GCTGCGGGAT GCCGTTCCTT CGCGCGTGAG GCTGCGGCTC TGACGCCCCA TAGGCTCCTT CAATTTCCGT 000080
000081 GATCCTCGGA GTCCCCAGGA GACCAGGTGA TGGCAGCAGC CAGACTCCTG CCAGTGCCGG CAGGACCCCA GGCCAAGCTG 000160 000161 ACCTTCGAGG ATGTGGCTGT GCTCCTCTCC CAGGATGAAT GGGACCGCCT GTGCCCTGCT CAGAGGGGTC TCTACAGAAA 000240 000241 TGTGATGATG GAAACCTATG GGAATGTAGT CTCATTGGGT AAGCCACCTT AGCAGGCCTC GTCTATGTAT CTGCGTATTG 000320 000321 GACTGGGGTG GGGGCTTCTC AGGGTACGGG GCCTGGGACA GGCTGGTCCT GGAGGTTTGC TCTCATCACC TCTCTGGGTG 000400 000401 CTCAGCTCCA GCAGAAGATC AGTCCTGTCC ATTTTCATGT CCCCACAAGT GGCTTGGGCA GGGGGAGGGG GCTCTGTAAA 000480 000481 TGTTGTGTAA ACAAAGACTT CCCTCCCCAC GAGCAGGACT TCCA |
Predicted Small Protein
| Name | NONHSAT129852_smProtein_170:244 |
| Length | 25 |
| Molecular weight | 2615.1041 |
| Aromaticity | 0.0416666666667 |
| Instability index | 58.9375 |
| Isoelectric point | 7.83477783203 |
| Runs | 5 |
| Runs residual | 0.0267857142857 |
| Runs probability | 0.0349231584526 |
| Amino acid sequence | MWLCSSPRMNGTACALLRGVSTEM |
| Secondary structure | LEEELLLLLLHHHHHHHHLLLLLL |
| PRMN | - |
| PiMo | - |
