Difference between revisions of "ENST00000436510.1"
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sequence = <dnaseq>GTAGCAATGGGGCAGGATGGATAATCCTCTCACTGAGGGGATGGTGAATAACTGGAAACAGTGACCAATCTGCTGCCGTTCACCATCTTGGTTGCAAATATCACTCCCGTCTCTTGCATGGGCGTGGTGGATTGGAGATGGCTGCAGATTCTTAGTCATTACTCTCAGCAAGACCTGGAGTCTTTTCCTCCTCCCCTTGGATCTGGGCTGACTCCAGGACTGGCTTTCATCAACAGGATGCAGCAGAAGCGACGCTGTGTGACTTCCGAGGCTGAGGCTGCAGAGATTTGAGGCATCTGCTCTCACCCAGCTTGAAGTGCTTCCTCTTGGAAGCCAGCCACCGTGAAAAACCCCGCCATGCTGTGAGGAAGCCCAAGAGAGCTGCATGGAGAGAAGGGCCTGTGGAAGAGCCCTGAGGTGCCACTCACATGAAGTGAACCTTTGTGGACCTTCCAGCCCAGCTACCAGCAAAACGCAAGCAGCGAGTCTCCAGGCCCAGCCTGCTTTTAACAAGACAGTGAAGAGTGGCAGTTAAAGGTCTGGCTGGCATCAGACAGTGCTGAATTCAAACACCAGCTGAGCTGAAAACGGCCTGACTGGGTGACCTTGAGCAAGCAGCCTGCCCTCTCTGAGGCTCAGTTTATTTTCTGGAAGGGAGAAGACGGTGTCTACTTCCAATGACCGCCATGATGTTTCAGGTTCAGCCCGAAGGGTGAGCAGCCAATAAAGAGTGCCGAGAACGGCCTCTGGCCTGCCAGGTAGAGAAATGACCTGATTCCTTCCAGAAGTTTCCAGTGTTCCCAAGCTGATGAGGCTCCTGGGAGATGCCTCCAGATCTCTTAACGTTCAGGGAAGCATGGGCTCTGGTTGCATTAGGGAGGATTTATTTTATTTTTAAAGGAGTTGAGGCCACTTTGCAATCAGAGCCTTCGTGGCTGGAGCTGGGCGAGCTGAGGAAGGAGTATTAATCAAGGCGCTTTAAGGACATGCAAATCAGGAGAAAGCTCAAGTGATTAGGGTGTGATGGGGCCTGGAGTCCAGCCTATATCCCCATCTGAGAAGAGAGAGCCAGAGTGCCAGGCAAGGTGGCTCAGGCCCAGCTGGGGGCGGCAGCCAAGGGGCTGCCATGGGGCCAGGAACTGTGGGTTGGGAGCAATTGGAGGCAGAGGGAAGGGAGCCACTCCAAGGTGGCTGAAGGGTCCCTGATGCCTGCGCTGTCCACATGGTACTCTGGCTGGCTTCCCCGCCTCCCCCACAGCTGCAGAGGGGCTGCTCTGGCATGATCCCCTGCCTGGCTGGGACAGGCCCCTCTTCCTAAGGATACAGAATGGTTATTTGGGTGAGAGGGGCCCACCGGCGCTGCTGGGGGCGGGATGGCGAATGTGACGTCAGCGATCTGCGGTATCTTCAGGGTGACAGCCGTACCCCCCGCGTGGGACCCAGGGCTCCACATCTATAGACCTGACCCAAGGAAAGACTCAGGCCTGTGCACAAGGATGCCATCTCGGGGACTGCGTATTCATAAGAAGCTGAATCAAACAGTGTCCAACAAGGGGGGTTGTTCGAGCTGGTTATGGGACGTGTTTACCACGGACGTTCAGGTCCTCCTGAGAAATGACGACCTAGACATGGGAAGATGGTTGCAATGTATTGTTCCGCAAAGGAGAAAAAAAGCAGGTTGCAAAACCCTGGGAACTGTCTGCCCACCTTCAAAAAGTCGGTCATATATCTAGAAAAATCTGGAAGGGTAGCCACAAAAACATCATCAGTAGGTACTTTGGAGAGGTTATTGTTACTTTCCCCTTTTATGTTAATTTTTGTGCAATAAACATATATGTATTTGTAA</dnaseq>| | sequence = <dnaseq>GTAGCAATGGGGCAGGATGGATAATCCTCTCACTGAGGGGATGGTGAATAACTGGAAACAGTGACCAATCTGCTGCCGTTCACCATCTTGGTTGCAAATATCACTCCCGTCTCTTGCATGGGCGTGGTGGATTGGAGATGGCTGCAGATTCTTAGTCATTACTCTCAGCAAGACCTGGAGTCTTTTCCTCCTCCCCTTGGATCTGGGCTGACTCCAGGACTGGCTTTCATCAACAGGATGCAGCAGAAGCGACGCTGTGTGACTTCCGAGGCTGAGGCTGCAGAGATTTGAGGCATCTGCTCTCACCCAGCTTGAAGTGCTTCCTCTTGGAAGCCAGCCACCGTGAAAAACCCCGCCATGCTGTGAGGAAGCCCAAGAGAGCTGCATGGAGAGAAGGGCCTGTGGAAGAGCCCTGAGGTGCCACTCACATGAAGTGAACCTTTGTGGACCTTCCAGCCCAGCTACCAGCAAAACGCAAGCAGCGAGTCTCCAGGCCCAGCCTGCTTTTAACAAGACAGTGAAGAGTGGCAGTTAAAGGTCTGGCTGGCATCAGACAGTGCTGAATTCAAACACCAGCTGAGCTGAAAACGGCCTGACTGGGTGACCTTGAGCAAGCAGCCTGCCCTCTCTGAGGCTCAGTTTATTTTCTGGAAGGGAGAAGACGGTGTCTACTTCCAATGACCGCCATGATGTTTCAGGTTCAGCCCGAAGGGTGAGCAGCCAATAAAGAGTGCCGAGAACGGCCTCTGGCCTGCCAGGTAGAGAAATGACCTGATTCCTTCCAGAAGTTTCCAGTGTTCCCAAGCTGATGAGGCTCCTGGGAGATGCCTCCAGATCTCTTAACGTTCAGGGAAGCATGGGCTCTGGTTGCATTAGGGAGGATTTATTTTATTTTTAAAGGAGTTGAGGCCACTTTGCAATCAGAGCCTTCGTGGCTGGAGCTGGGCGAGCTGAGGAAGGAGTATTAATCAAGGCGCTTTAAGGACATGCAAATCAGGAGAAAGCTCAAGTGATTAGGGTGTGATGGGGCCTGGAGTCCAGCCTATATCCCCATCTGAGAAGAGAGAGCCAGAGTGCCAGGCAAGGTGGCTCAGGCCCAGCTGGGGGCGGCAGCCAAGGGGCTGCCATGGGGCCAGGAACTGTGGGTTGGGAGCAATTGGAGGCAGAGGGAAGGGAGCCACTCCAAGGTGGCTGAAGGGTCCCTGATGCCTGCGCTGTCCACATGGTACTCTGGCTGGCTTCCCCGCCTCCCCCACAGCTGCAGAGGGGCTGCTCTGGCATGATCCCCTGCCTGGCTGGGACAGGCCCCTCTTCCTAAGGATACAGAATGGTTATTTGGGTGAGAGGGGCCCACCGGCGCTGCTGGGGGCGGGATGGCGAATGTGACGTCAGCGATCTGCGGTATCTTCAGGGTGACAGCCGTACCCCCCGCGTGGGACCCAGGGCTCCACATCTATAGACCTGACCCAAGGAAAGACTCAGGCCTGTGCACAAGGATGCCATCTCGGGGACTGCGTATTCATAAGAAGCTGAATCAAACAGTGTCCAACAAGGGGGGTTGTTCGAGCTGGTTATGGGACGTGTTTACCACGGACGTTCAGGTCCTCCTGAGAAATGACGACCTAGACATGGGAAGATGGTTGCAATGTATTGTTCCGCAAAGGAGAAAAAAAGCAGGTTGCAAAACCCTGGGAACTGTCTGCCCACCTTCAAAAAGTCGGTCATATATCTAGAAAAATCTGGAAGGGTAGCCACAAAAACATCATCAGTAGGTACTTTGGAGAGGTTATTGTTACTTTCCCCTTTTATGTTAATTTTTGTGCAATAAACATATATGTATTTGTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-C9orf50-4]] | + | [[Category:Intergenic]][[Category:lnc-C9orf50-4]][[Category:NONHSAG053583]] |
Revision as of 10:58, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000436510.1 |
| Source |
Gencode19 |
| Same with |
lnc-C9orf50-4:3,NONHSAT135062 |
| Classification |
intergenic |
| Length |
1846 nt |
| Genomic location |
chr9-:132192931..132209569 |
| Exon number |
2 |
| Exons |
132192931..132194289,132209083..132209569 |
| Genome context |
|
| Sequence |
000001 GTAGCAATGG GGCAGGATGG ATAATCCTCT CACTGAGGGG ATGGTGAATA ACTGGAAACA GTGACCAATC TGCTGCCGTT 000080
000081 CACCATCTTG GTTGCAAATA TCACTCCCGT CTCTTGCATG GGCGTGGTGG ATTGGAGATG GCTGCAGATT CTTAGTCATT 000160 000161 ACTCTCAGCA AGACCTGGAG TCTTTTCCTC CTCCCCTTGG ATCTGGGCTG ACTCCAGGAC TGGCTTTCAT CAACAGGATG 000240 000241 CAGCAGAAGC GACGCTGTGT GACTTCCGAG GCTGAGGCTG CAGAGATTTG AGGCATCTGC TCTCACCCAG CTTGAAGTGC 000320 000321 TTCCTCTTGG AAGCCAGCCA CCGTGAAAAA CCCCGCCATG CTGTGAGGAA GCCCAAGAGA GCTGCATGGA GAGAAGGGCC 000400 000401 TGTGGAAGAG CCCTGAGGTG CCACTCACAT GAAGTGAACC TTTGTGGACC TTCCAGCCCA GCTACCAGCA AAACGCAAGC 000480 000481 AGCGAGTCTC CAGGCCCAGC CTGCTTTTAA CAAGACAGTG AAGAGTGGCA GTTAAAGGTC TGGCTGGCAT CAGACAGTGC 000560 000561 TGAATTCAAA CACCAGCTGA GCTGAAAACG GCCTGACTGG GTGACCTTGA GCAAGCAGCC TGCCCTCTCT GAGGCTCAGT 000640 000641 TTATTTTCTG GAAGGGAGAA GACGGTGTCT ACTTCCAATG ACCGCCATGA TGTTTCAGGT TCAGCCCGAA GGGTGAGCAG 000720 000721 CCAATAAAGA GTGCCGAGAA CGGCCTCTGG CCTGCCAGGT AGAGAAATGA CCTGATTCCT TCCAGAAGTT TCCAGTGTTC 000800 000801 CCAAGCTGAT GAGGCTCCTG GGAGATGCCT CCAGATCTCT TAACGTTCAG GGAAGCATGG GCTCTGGTTG CATTAGGGAG 000880 000881 GATTTATTTT ATTTTTAAAG GAGTTGAGGC CACTTTGCAA TCAGAGCCTT CGTGGCTGGA GCTGGGCGAG CTGAGGAAGG 000960 000961 AGTATTAATC AAGGCGCTTT AAGGACATGC AAATCAGGAG AAAGCTCAAG TGATTAGGGT GTGATGGGGC CTGGAGTCCA 001040 001041 GCCTATATCC CCATCTGAGA AGAGAGAGCC AGAGTGCCAG GCAAGGTGGC TCAGGCCCAG CTGGGGGCGG CAGCCAAGGG 001120 001121 GCTGCCATGG GGCCAGGAAC TGTGGGTTGG GAGCAATTGG AGGCAGAGGG AAGGGAGCCA CTCCAAGGTG GCTGAAGGGT 001200 001201 CCCTGATGCC TGCGCTGTCC ACATGGTACT CTGGCTGGCT TCCCCGCCTC CCCCACAGCT GCAGAGGGGC TGCTCTGGCA 001280 001281 TGATCCCCTG CCTGGCTGGG ACAGGCCCCT CTTCCTAAGG ATACAGAATG GTTATTTGGG TGAGAGGGGC CCACCGGCGC 001360 001361 TGCTGGGGGC GGGATGGCGA ATGTGACGTC AGCGATCTGC GGTATCTTCA GGGTGACAGC CGTACCCCCC GCGTGGGACC 001440 001441 CAGGGCTCCA CATCTATAGA CCTGACCCAA GGAAAGACTC AGGCCTGTGC ACAAGGATGC CATCTCGGGG ACTGCGTATT 001520 001521 CATAAGAAGC TGAATCAAAC AGTGTCCAAC AAGGGGGGTT GTTCGAGCTG GTTATGGGAC GTGTTTACCA CGGACGTTCA 001600 001601 GGTCCTCCTG AGAAATGACG ACCTAGACAT GGGAAGATGG TTGCAATGTA TTGTTCCGCA AAGGAGAAAA AAAGCAGGTT 001680 001681 GCAAAACCCT GGGAACTGTC TGCCCACCTT CAAAAAGTCG GTCATATATC TAGAAAAATC TGGAAGGGTA GCCACAAAAA 001760 001761 CATCATCAGT AGGTACTTTG GAGAGGTTAT TGTTACTTTC CCCTTTTATG TTAATTTTTG TGCAATAAAC ATATATGTAT 001840 001841 TTGTAA |