Difference between revisions of "Lnc-MTHFSD-2:4"

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sequence = <dnaseq>CGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGGTGGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGCGCATGAGAGATCCTGAGCCACAGCCGCCCAGCCCTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCATGATTTGTTATGCAGTCGTAGATAACCAGAAAACATCGGATTTACATTTTAAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGGGAGCTCCACTGGACTTCTGTCCAGAGCTCCTCAGCTCACCTCTCTGTATCCTTGCCCTGTGGCTCAGGCTTCTAACAATACAGAGGCTGGATTCCAAGAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTGGCATATGCTGGGGGTAGGGGTAGCATTGTTGGGGATCATCTTTGGAGCTGTGTGCCAAGGAGTAAATTGCTGGGCTGCTTTCTACCTGAGGAAGTCCACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGCCCTTGCCTCAGCCTGTGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCATGAAACCGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCTGCTGCTCTGAGCCTGTGCACCTGGGGTGTTTCCCTGGAGGTCCTGTGTATGAGGATACTCATCAGCATGGGGTTTGGGAAGCCTAGCAGTGGAGACAACCTAGGTGGTCCTCTCCAGGGGAGTAGGTAAGAGCCCTACAGCAGTGAAAAGCATTGAAGGAAAAGTGTGTTCAGCAGTGCTCTTAATCTGATCAGAGCAGCCTGAACACATTCTAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCCTCAAAGTTAAGTAGTCAGGAAAGGGGGCTTGGGGCTTGCCACATGGATGGTTGCCACTCTCCTTTGCAAAGTGTAGTCCCCAAAAACAGGTGGAAGAGGGAAGGGTCCAATTAGAAGGCCGAGTACCAGCTGCCATGAATATGCCAGAGCTGCTGGCTAGTGATAAATAACTGAAACCCAGGGGGACAGCAGAGCTTGGGTGACCATACATTCTAGGAAAGAAAACATGCCTGTTGTCCTGGCTTTTTATCCAGCTTAGACAAAGATGGGCAAAGAAAATAATTTAGAAAATGGTAGAGATGGGCACAGAGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCCGTCAGAGTCTCCAGAAGGAACTGGCCCTTCATCACCTTTCGGACTTCTGGCCTCCAGAACTGGGCAAGAAAATGTTTCTGCTGTTGGAGGCCATCCAGCTGGTGGTCATTTGTTATGGTTGCCACAGAAAACGAATATAGATTTAGACATCTAATTTGCATATATAGATATGCATGTGTATTT</dnaseq>|
 
sequence = <dnaseq>CGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGGTGGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGCGCATGAGAGATCCTGAGCCACAGCCGCCCAGCCCTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCATGATTTGTTATGCAGTCGTAGATAACCAGAAAACATCGGATTTACATTTTAAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGGGAGCTCCACTGGACTTCTGTCCAGAGCTCCTCAGCTCACCTCTCTGTATCCTTGCCCTGTGGCTCAGGCTTCTAACAATACAGAGGCTGGATTCCAAGAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTGGCATATGCTGGGGGTAGGGGTAGCATTGTTGGGGATCATCTTTGGAGCTGTGTGCCAAGGAGTAAATTGCTGGGCTGCTTTCTACCTGAGGAAGTCCACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGCCCTTGCCTCAGCCTGTGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCATGAAACCGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCTGCTGCTCTGAGCCTGTGCACCTGGGGTGTTTCCCTGGAGGTCCTGTGTATGAGGATACTCATCAGCATGGGGTTTGGGAAGCCTAGCAGTGGAGACAACCTAGGTGGTCCTCTCCAGGGGAGTAGGTAAGAGCCCTACAGCAGTGAAAAGCATTGAAGGAAAAGTGTGTTCAGCAGTGCTCTTAATCTGATCAGAGCAGCCTGAACACATTCTAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCCTCAAAGTTAAGTAGTCAGGAAAGGGGGCTTGGGGCTTGCCACATGGATGGTTGCCACTCTCCTTTGCAAAGTGTAGTCCCCAAAAACAGGTGGAAGAGGGAAGGGTCCAATTAGAAGGCCGAGTACCAGCTGCCATGAATATGCCAGAGCTGCTGGCTAGTGATAAATAACTGAAACCCAGGGGGACAGCAGAGCTTGGGTGACCATACATTCTAGGAAAGAAAACATGCCTGTTGTCCTGGCTTTTTATCCAGCTTAGACAAAGATGGGCAAAGAAAATAATTTAGAAAATGGTAGAGATGGGCACAGAGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCCGTCAGAGTCTCCAGAAGGAACTGGCCCTTCATCACCTTTCGGACTTCTGGCCTCCAGAACTGGGCAAGAAAATGTTTCTGCTGTTGGAGGCCATCCAGCTGGTGGTCATTTGTTATGGTTGCCACAGAAAACGAATATAGATTTAGACATCTAATTTGCATATATAGATATGCATGTGTATTT</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:lnc-MTHFSD-2]]

Revision as of 11:11, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-MTHFSD-2:4

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

2579 nt

Genomic location

chr16-:86521343..86542441

Exon number

4

Exons

86521343..86523338,86523870..86524119,86524459..86524610,86542261..86542441

Genome context

Sequence
000001 CGGCAAGGGC GGCCCTCGCG CACCTGGCTG CCAGCCCGCA GGGGGCTCGC ACGCAGACCT GCCCTTGCCA CCTCAGCGCT 000080
000081 CGGGTGCGGG CTGGGGGCGG TGGAGCCACG AAAGGTGGTG CCGAGAGCGG AGCGCAGGAC AGCGCAGGAG CCCCGGCGCA 000160
000161 TCGCGGCGCG CACAGACCCA GGATTTGTGA AGAGGTGACC CAAATTTCAA GACAATGTTG GATGCAAACG GATTTGCCAG 000240
000241 CAACTGCATC ACTGTCAAAA CCAGCTCTGC CCGTGTCTTC CGAAGATACC AAGTGAAATA CATGTAGATG GGATTTACAT 000320
000321 CTGAAAAACC AAGTGAGAAA CTGAAGACCA GAGAGGGTGA GTGGTTTACT CAGTTTGGCA CAACTGACCC CAACCTAGCC 000400
000401 CTCCATGAGG ACTGAGCGCA TGAGAGATCC TGAGCCACAG CCGCCCAGCC CTGCTCCTCT CGAATTTCTG ACCTACAGGA 000480
000481 ACTGCAAGAA GTAATGAAAG ACTGCTGTTT AAAGCCACTG CATTTTGGCA TGATTTGTTA TGCAGTCGTA GATAACCAGA 000560
000561 AAACATCGGA TTTACATTTT AAGGATTTGG TGCATGGGAT GGGCTCAGTT GGGCAGTTCT TCTGTTCCAT GTGATGGTAC 000640
000641 TGGGGCTGCA GTCATTCAGA GGCTCAACTG GGCTGAACGT GCAAGGTTTC TTGCTCACGT GGCCATCAGT GGTGCTGGCT 000720
000721 GCTGTTGGGA GCTCCACTGG ACTTCTGTCC AGAGCTCCTC AGCTCACCTC TCTGTATCCT TGCCCTGTGG CTCAGGCTTC 000800
000801 TAACAATACA GAGGCTGGAT TCCAAGAGGA GGGAATTAGA AGCGTTCAGC CTTCTTAAGA CCAGGATTCA GATGTCCCAG 000880
000881 ACTGTCACTG TATTGACCGG AGCATTTACA GGCCAGCCTA GTAATTTTTC CATCTTGGGC AGGAATGGGT GGCATATGCT 000960
000961 GGGGGTAGGG GTAGCATTGT TGGGGATCAT CTTTGGAGCT GTGTGCCAAG GAGTAAATTG CTGGGCTGCT TTCTACCTGA 001040
001041 GGAAGTCCAC TATGCTTGCT TGTGGAGAGT GGATTGTGTG CTCAGAGTCC ACAAGGATTT AAGAATCCGA GCCCTGCTGC 001120
001121 CCTTGCCTCA GCCTGTGCAT TAGGGCCCGG TGGTGAGAGC ACTGAGCCAT TGTGAATCAA GGCCCCTCCC TCGACCTGCA 001200
001201 TACTAACAGG CCAGAAGAGC TTGCTTGATT TTGGTCCTAG GCTCCTGCCT GTGGGTTGGA TTCCAGGGGC ACTCTCTCCT 001280
001281 CCACAAACCA GACGGTGGCA GGTACATCCC CTCAATGGAA ATTGCCCACA CTTCACCCTA AAGACAGATC CTGCTGTTCA 001360
001361 GCAACAATGT GAGTGGCCCA CACATTTGTC CAGCATGAAA CCGTTTGCAG ATTCCTTTCC AGTACACAGT CCCGTCAGCC 001440
001441 GGTCACTTCA CGATGACAGC TCCTCGAAGC ACCTTTTGGT TTGCAGTTGT GTAGCTTAGA AGTAGGAGCC TGCACGGCTT 001520
001521 CAGGAATTCA CAGAAGGAGC ACACTTTGTG CTTGGAGAAG TTAATTATAG GAATATCCTG CAACCTGCTG CTCTGAGCCT 001600
001601 GTGCACCTGG GGTGTTTCCC TGGAGGTCCT GTGTATGAGG ATACTCATCA GCATGGGGTT TGGGAAGCCT AGCAGTGGAG 001680
001681 ACAACCTAGG TGGTCCTCTC CAGGGGAGTA GGTAAGAGCC CTACAGCAGT GAAAAGCATT GAAGGAAAAG TGTGTTCAGC 001760
001761 AGTGCTCTTA ATCTGATCAG AGCAGCCTGA ACACATTCTA AACACAGGGC ATTTAGAACT AGGGTAGAGG CACTAGAGCA 001840
001841 CCATAGATAC AAACTCAGAT TCTGAAGGTA AATGCCCAGG TTCAAATCCA AGCCCCCTCG CCAAGTGACC ATGACTCCCC 001920
001921 CGAGTCACCT GACCTCTGTG TTTACATCCT CAAAGTTAAG TAGTCAGGAA AGGGGGCTTG GGGCTTGCCA CATGGATGGT 002000
002001 TGCCACTCTC CTTTGCAAAG TGTAGTCCCC AAAAACAGGT GGAAGAGGGA AGGGTCCAAT TAGAAGGCCG AGTACCAGCT 002080
002081 GCCATGAATA TGCCAGAGCT GCTGGCTAGT GATAAATAAC TGAAACCCAG GGGGACAGCA GAGCTTGGGT GACCATACAT 002160
002161 TCTAGGAAAG AAAACATGCC TGTTGTCCTG GCTTTTTATC CAGCTTAGAC AAAGATGGGC AAAGAAAATA ATTTAGAAAA 002240
002241 TGGTAGAGAT GGGCACAGAG AAAGGGCACG GAGGGAGGCA CAAACAGAAG GCCAAGTGAT GGTGGAGGCA GACATTGGAG 002320
002321 AAATGCCTTT ACAAGCCGGG GAATGCCAAG GATGCTGGCA ACCCTGGGAG TGGGAAGAAC CTGGAACACA CCCTCCGTCA 002400
002401 GAGTCTCCAG AAGGAACTGG CCCTTCATCA CCTTTCGGAC TTCTGGCCTC CAGAACTGGG CAAGAAAATG TTTCTGCTGT 002480
002481 TGGAGGCCAT CCAGCTGGTG GTCATTTGTT ATGGTTGCCA CAGAAAACGA ATATAGATTT AGACATCTAA TTTGCATATA 002560
002561 TAGATATGCA TGTGTATTT
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