Difference between revisions of "NONHSAT112698"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTGCCATCTTTACCTATGTGATTAAGACCATAGTTACTGGGCACCAGACCCTGTGCCCACTTTGCCTAGGATTTCCCCCAGGCCCTGCCCTTCCTCTGCCCCTCAGCTCCAACTCACATCCTGGAAGGTGTGCATGGTGACAATGATCTCATTGGTTAGTGCTGAACAGTCCTCATTCTCATCGGCTATAAAGAGAAGGTGACAGCGTGGCCAGTGAGTGAGGAAACGGCCTGGGGTAAGAGCAGGAGAAGGTAAGGGACTCTATAGTAAGACTTGGGAAATCTGAGGAAGCTGGGGTCCAACACTCCATTTTTCTCTCTGCAAAGATCTGTGTGGCTCCTGGCCTTTCAGGGAAGGTCTGTGTGCATGGCTGCATGGGGGTCTGCAGAGCTCCAGGGTTACTgggagggaaggagaggagacaggatgggaaaagagaggggaggaggTACACACAGGGCTCCCGGACTACCTGCTTTTCTCCGGAAGCAGAAGGAGCGGAAGGGGCACTTTCCATGCCAGATGTGGAGATGGGGAACCAGCTGGCAACTGCTGTCATCCACATTCTCCCAACCTGatgtggtgacctaatgtacagtctgaccaactgtatgcggAGATGAGAGCCAGGAGCTGTTACCTGGTGGGATGAGCAAGGAGATGCCTGTATCCTGGAGCATCAGGCAACCGCCGCGGTGATCCACCTCTCGAGCCGAAAACACCAACAGTT</dnaseq>| | sequence = <dnaseq>GTGCCATCTTTACCTATGTGATTAAGACCATAGTTACTGGGCACCAGACCCTGTGCCCACTTTGCCTAGGATTTCCCCCAGGCCCTGCCCTTCCTCTGCCCCTCAGCTCCAACTCACATCCTGGAAGGTGTGCATGGTGACAATGATCTCATTGGTTAGTGCTGAACAGTCCTCATTCTCATCGGCTATAAAGAGAAGGTGACAGCGTGGCCAGTGAGTGAGGAAACGGCCTGGGGTAAGAGCAGGAGAAGGTAAGGGACTCTATAGTAAGACTTGGGAAATCTGAGGAAGCTGGGGTCCAACACTCCATTTTTCTCTCTGCAAAGATCTGTGTGGCTCCTGGCCTTTCAGGGAAGGTCTGTGTGCATGGCTGCATGGGGGTCTGCAGAGCTCCAGGGTTACTgggagggaaggagaggagacaggatgggaaaagagaggggaggaggTACACACAGGGCTCCCGGACTACCTGCTTTTCTCCGGAAGCAGAAGGAGCGGAAGGGGCACTTTCCATGCCAGATGTGGAGATGGGGAACCAGCTGGCAACTGCTGTCATCCACATTCTCCCAACCTGatgtggtgacctaatgtacagtctgaccaactgtatgcggAGATGAGAGCCAGGAGCTGTTACCTGGTGGGATGAGCAAGGAGATGCCTGTATCCTGGAGCATCAGGCAACCGCCGCGGTGATCCACCTCTCGAGCCGAAAACACCAACAGTT</dnaseq>| | ||
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− | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG043754]] |
Revision as of 11:28, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112698 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
730 nt |
Genomic location |
chr6+:40999303..41002518 |
Exon number |
2 |
Exons |
40999303..40999879,41002366..41002518 |
Genome context |
|
Sequence |
000001 GTGCCATCTT TACCTATGTG ATTAAGACCA TAGTTACTGG GCACCAGACC CTGTGCCCAC TTTGCCTAGG ATTTCCCCCA 000080
000081 GGCCCTGCCC TTCCTCTGCC CCTCAGCTCC AACTCACATC CTGGAAGGTG TGCATGGTGA CAATGATCTC ATTGGTTAGT 000160 000161 GCTGAACAGT CCTCATTCTC ATCGGCTATA AAGAGAAGGT GACAGCGTGG CCAGTGAGTG AGGAAACGGC CTGGGGTAAG 000240 000241 AGCAGGAGAA GGTAAGGGAC TCTATAGTAA GACTTGGGAA ATCTGAGGAA GCTGGGGTCC AACACTCCAT TTTTCTCTCT 000320 000321 GCAAAGATCT GTGTGGCTCC TGGCCTTTCA GGGAAGGTCT GTGTGCATGG CTGCATGGGG GTCTGCAGAG CTCCAGGGTT 000400 000401 ACTgggaggg aaggagagga gacaggatgg gaaaagagag gggaggaggT ACACACAGGG CTCCCGGACT ACCTGCTTTT 000480 000481 CTCCGGAAGC AGAAGGAGCG GAAGGGGCAC TTTCCATGCC AGATGTGGAG ATGGGGAACC AGCTGGCAAC TGCTGTCATC 000560 000561 CACATTCTCC CAACCTGatg tggtgaccta atgtacagtc tgaccaactg tatgcggAGA TGAGAGCCAG GAGCTGTTAC 000640 000641 CTGGTGGGAT GAGCAAGGAG ATGCCTGTAT CCTGGAGCAT CAGGCAACCG CCGCGGTGAT CCACCTCTCG AGCCGAAAAC 000720 000721 ACCAACAGTT |
Predicted Small Protein
Name | NONHSAT112698_smProtein_374:577 |
Length | 68 |
Molecular weight | 7160.0577 |
Aromaticity | 0.0298507462687 |
Instability index | 62.9104477612 |
Isoelectric point | 7.82745361328 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0333348053937 |
Amino acid sequence | MGVCRAPGLLGGKERRQDGKREGRRYTQGSRTTCFSPEAEGAEGALSMPDVEMGNQLATA VIHILPT |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLEELLLLEEEEELLLLLLLLLLLLLLLHHHLHHHHHE EEEELLL |
PRMN | - |
PiMo | - |