Difference between revisions of "NONHSAT067537"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTCAACACAGACCTTGAAATCCCCGCACCGCTCCCTCCACCCCGTGTAAATTCAGGCGTCTCCGTGAGAGTCCGGCGCTCGCTTCCCTGTGTGTTAAAATCGCTCGGCGACGGGTCCTGTCCCCGCTCGTTCTGCCTTGGGCCAGagcctcgggcaagttcttcaagaggtatccagaagaagtcattgttatcccagatgacagctccatacatgttattgctcctgaggaccttccagtgggacaagatgtggcactggaagacagtgacattgatggtccccaccctgtgtaggcctaggctaatacacaggagtgttgccatgttgtccaaactggtctcgaaattctggagtcaagcagtctgcctgcctcgttctccaaacgtgctgggattacaggcatgagccactacgcctggccaagtattcggtatttataaaatctacagtagtacacagttatgtcgtaggccatcacattcggtcaccacacactcactgactcatccagagcaatttctagtcctgcaagcgccattcatggtgagtgccctagacagctgtaccattttttaaacatgtatatcatattattattgtaccttttctatgtcgagacatgtttttatttacaagtacataccattgtgtcacagttgcctgtagtattcagtacataacatgatgtacaggtttttagcaataggctataccatataccctaggtgtgtagtagactataccatcttggtttatgtaagtgcagtctgtaatgaaatggtctgaaaacacatttctcagaaccggtccc</dnaseq>| | sequence = <dnaseq>GTCAACACAGACCTTGAAATCCCCGCACCGCTCCCTCCACCCCGTGTAAATTCAGGCGTCTCCGTGAGAGTCCGGCGCTCGCTTCCCTGTGTGTTAAAATCGCTCGGCGACGGGTCCTGTCCCCGCTCGTTCTGCCTTGGGCCAGagcctcgggcaagttcttcaagaggtatccagaagaagtcattgttatcccagatgacagctccatacatgttattgctcctgaggaccttccagtgggacaagatgtggcactggaagacagtgacattgatggtccccaccctgtgtaggcctaggctaatacacaggagtgttgccatgttgtccaaactggtctcgaaattctggagtcaagcagtctgcctgcctcgttctccaaacgtgctgggattacaggcatgagccactacgcctggccaagtattcggtatttataaaatctacagtagtacacagttatgtcgtaggccatcacattcggtcaccacacactcactgactcatccagagcaatttctagtcctgcaagcgccattcatggtgagtgccctagacagctgtaccattttttaaacatgtatatcatattattattgtaccttttctatgtcgagacatgtttttatttacaagtacataccattgtgtcacagttgcctgtagtattcagtacataacatgatgtacaggtttttagcaataggctataccatataccctaggtgtgtagtagactataccatcttggtttatgtaagtgcagtctgtaatgaaatggtctgaaaacacatttctcagaaccggtccc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG026408]] |
Revision as of 11:35, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT067537 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
814 nt |
| Genomic location |
chr19+:52839615..52851465 |
| Exon number |
3 |
| Exons |
52839615..52839759,52850346..52850508,52850960..52851465 |
| Genome context |
|
| Sequence |
000001 GTCAACACAG ACCTTGAAAT CCCCGCACCG CTCCCTCCAC CCCGTGTAAA TTCAGGCGTC TCCGTGAGAG TCCGGCGCTC 000080
000081 GCTTCCCTGT GTGTTAAAAT CGCTCGGCGA CGGGTCCTGT CCCCGCTCGT TCTGCCTTGG GCCAGagcct cgggcaagtt 000160 000161 cttcaagagg tatccagaag aagtcattgt tatcccagat gacagctcca tacatgttat tgctcctgag gaccttccag 000240 000241 tgggacaaga tgtggcactg gaagacagtg acattgatgg tccccaccct gtgtaggcct aggctaatac acaggagtgt 000320 000321 tgccatgttg tccaaactgg tctcgaaatt ctggagtcaa gcagtctgcc tgcctcgttc tccaaacgtg ctgggattac 000400 000401 aggcatgagc cactacgcct ggccaagtat tcggtattta taaaatctac agtagtacac agttatgtcg taggccatca 000480 000481 cattcggtca ccacacactc actgactcat ccagagcaat ttctagtcct gcaagcgcca ttcatggtga gtgccctaga 000560 000561 cagctgtacc attttttaaa catgtatatc atattattat tgtacctttt ctatgtcgag acatgttttt atttacaagt 000640 000641 acataccatt gtgtcacagt tgcctgtagt attcagtaca taacatgatg tacaggtttt tagcaatagg ctataccata 000720 000721 taccctaggt gtgtagtaga ctataccatc ttggtttatg taagtgcagt ctgtaatgaa atggtctgaa aacacatttc 000800 000801 tcagaaccgg tccc |
Predicted Small Protein
| Name | NONHSAT067537_smProtein_581:682 |
| Length | 34 |
| Molecular weight | 3957.735 |
| Aromaticity | 0.212121212121 |
| Instability index | 62.7127272727 |
| Isoelectric point | 5.22222900391 |
| Runs | 6 |
| Runs residual | 0.00230566534914 |
| Runs probability | 0.00646234469763 |
| Amino acid sequence | MYIILLLYLFYVETCFYLQVHTIVSQLPVVFST |
| Secondary structure | LHHHHHHHHHHHHHHHHHHHEEEELLLLEEELL |
| PRMN | LHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
| PiMo | i???????????????????????????????? |
