Difference between revisions of "Lnc-SLC39A11-1:8"
| Line 42: | Line 42: | ||
sequence = <dnaseq>CGGCGCGGGTGCGCGGTGCGGCGCTGGTATCCAGAGGACGCGGTCACCGCCTCTGGCATTTGTCGTTCTGCGCTTCTCCGCAAGGACCCTCTGTTAGGCAGGCGCCCACCGTAAGCCTCCCGGGCCTTGTGAACCTGCAAACCCAAGTCTGAGAGACGATCCGCCTTCAGCGCTTTCCAGCTTGGCAGAGAGGCTTTCCCGGCGGGGATCTTTGGTTGGCGCTGGCGATGCGCGGGGAAGAAAGGCGAGGAGCGGCGTCCAGGCTGGGTGATGTCCCAGCACGAGTAGGCGGGATGCGCTCGCTTGGTCCTCCGGGCGCCCGGTCCCTGCCCGCGTCGCGCGCCCACCCCTGGGGACGAGAAGGCGGCCGCCTGAGGACCCCCGCCCGCGACCTCCGCGAGTCTGGAGCGCAGAGGACAGGGTCTGGCTGCTCTTTGGCCTTGGATGGAAAGTGGGGAATTGGGTGGGGGGCTGCGGACCCCTTAACGTGGATTACTTGGTGTGTATCAGCTGGGCTCAGAAGACCCACGACCTCTTCTCCATCCGTGGATTGATTTGTTCTGCTTAACAGCTGGGTCGCCAAGCTGGAGGTGGAATCAGAGGTTTCTGGCTGACTCGGTGGGTGCTTTGAACCAGGAAAGGACAAGAAAGAGGATGGGAAGGACTGATCCACATTCCCACCAGGAAGTTTAGCAGAACCCCCGCGTGCCACCTGGACCCCTTGGAAGGACCTGGCTCAGGCTGGACCACCTCTTGAGAGGCAGGAGCTCTGGATTTGATCAAGAATTCTTTGCTGAGCATGGTGCCTCATGCCTATAATCCCAACACTTTGGGAGGCCAGTGTGGGAGGATCTCTTGAGCCCAGGAGTTCAAGACTAGCCTGGGCAACACAGAGAGACCCCATCTCTAAAATAATAATAATAATAAAATAAAAAATTAGCAGGGCATGGTGGCATGTGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCAAGAGGATGGCTGGAGCCTGGGATGTTGAGGCTGCAATGAACTGTGATTACCCCACTGCACTCCAGCCTGGGCAAAAGAGCGAGAGACCCTGTCTCAAATAATAATAATAATAATAATCTTATTTTGGAGAATAAAGAGACCTCTGGATTTGAGGTGCCATTTGGGTAGAAAGAAAAGACGTTTACACCGAGAAATAGTCTGTGTTGCCCTGAAGGAGCAGAGGGATGCATCGCTGGAGGTGACCTACAGTTGAAGAAGACTCATTATGACAGACCTTGTCCTTCTTCCTTGTGGAAAGTGTTTCCTCTGCTGCTACTGCTCATGAGACTCTTCCCCCTCCCTGTCCCAGGGAACCAAAGGGCTTTCTACCACACCCTTTCTTGCCCCCCGCCTCCCATGTCTGCTGTGCCTTTGTACTCAGCAATTCTTGTTTGCTCCATTATCTTCCAGCCGGATACAGAGTGAATAGTTAACCACACTTAGGTCAAATAGGATCTAAATTTTTGTTCCTGCTCCGTGTAAAGAGGCCAGTGTTTGTGTGTTGCAAGCAGCCTTGGAATAGTAACTCTTCTCATTTGTTTGGGATCTGGCCACCAAGTTCCAGAATGATACACGGATCAGTGCAGAAGTTCATCAGGCTCTCGGACCTTAGGGCTGTTGGAGAAGGCTTCAGCAGCAGAACTGATGGTGAAGGCTCGTGTTCTCCATCCTCAACTTTCTTTGCTTCGATCATACACAAGAATACATTTGGAAGGGCAAAAAATGAACACTGTCGTTCATTGCAGCCGTGTTTTGTGACACAGATGCACAGTCTGCTGTGAAGACCTTCTCTCAAGTGGCATTTGGGAGTCCATGCCAGATCATGGTGCTTCATGAGAGACTGACAGCTATCAGGGGTTGTGGCACTTAGTGAGGACTCTCCTCCCCCAGTGTGTGCTGATGACACATACACACCTGACAATAGCTTGAGTCTTCTCTGTTCCTTTTACTCTGTAGCCAACATACACATGATTTAAAACCCTTTCTAAATATCTATCATGGTTCATCCTTGTCCAAATGCAGAGTCAGAGCTATTTGTACTTCATTATTATTTCCAAGGCGAATAGTTGGCTTTCTTTTTGCAAAAATAATTAAAGTTTTTGTATGTTGCAGTTGCTGTGCTTGTATGACCATTTAGTGAATTTGGTGTCTTCTAAATAGAACAGTGGAGTCCTTGTGGACATCTCAGATTCATCACAAAATGATTGAGGAGAACCTCTTGAAGATGTTTAGAGCTATTGAAATTTACAGATTGTTGATGGGTTTTCACCTTTTCCTTCCTTTCTTGACACACAGTTACAGGCATTGTATTCCTTGGATTCCTACAGGTGTCAAGGAACAGAGATCCACTTACGTTACCTTCATAAATCCTGGTTTATTCAAAAGTCACAGTAAGGTAGACAGGAAATAGTCCCAGCCACTGCCTAGCTAAGCCTTTTCAAAAAGCCCAAGGTCATTCAGCAGATGCAGAAGCACTAGTTGGTTT</dnaseq>| | sequence = <dnaseq>CGGCGCGGGTGCGCGGTGCGGCGCTGGTATCCAGAGGACGCGGTCACCGCCTCTGGCATTTGTCGTTCTGCGCTTCTCCGCAAGGACCCTCTGTTAGGCAGGCGCCCACCGTAAGCCTCCCGGGCCTTGTGAACCTGCAAACCCAAGTCTGAGAGACGATCCGCCTTCAGCGCTTTCCAGCTTGGCAGAGAGGCTTTCCCGGCGGGGATCTTTGGTTGGCGCTGGCGATGCGCGGGGAAGAAAGGCGAGGAGCGGCGTCCAGGCTGGGTGATGTCCCAGCACGAGTAGGCGGGATGCGCTCGCTTGGTCCTCCGGGCGCCCGGTCCCTGCCCGCGTCGCGCGCCCACCCCTGGGGACGAGAAGGCGGCCGCCTGAGGACCCCCGCCCGCGACCTCCGCGAGTCTGGAGCGCAGAGGACAGGGTCTGGCTGCTCTTTGGCCTTGGATGGAAAGTGGGGAATTGGGTGGGGGGCTGCGGACCCCTTAACGTGGATTACTTGGTGTGTATCAGCTGGGCTCAGAAGACCCACGACCTCTTCTCCATCCGTGGATTGATTTGTTCTGCTTAACAGCTGGGTCGCCAAGCTGGAGGTGGAATCAGAGGTTTCTGGCTGACTCGGTGGGTGCTTTGAACCAGGAAAGGACAAGAAAGAGGATGGGAAGGACTGATCCACATTCCCACCAGGAAGTTTAGCAGAACCCCCGCGTGCCACCTGGACCCCTTGGAAGGACCTGGCTCAGGCTGGACCACCTCTTGAGAGGCAGGAGCTCTGGATTTGATCAAGAATTCTTTGCTGAGCATGGTGCCTCATGCCTATAATCCCAACACTTTGGGAGGCCAGTGTGGGAGGATCTCTTGAGCCCAGGAGTTCAAGACTAGCCTGGGCAACACAGAGAGACCCCATCTCTAAAATAATAATAATAATAAAATAAAAAATTAGCAGGGCATGGTGGCATGTGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCAAGAGGATGGCTGGAGCCTGGGATGTTGAGGCTGCAATGAACTGTGATTACCCCACTGCACTCCAGCCTGGGCAAAAGAGCGAGAGACCCTGTCTCAAATAATAATAATAATAATAATCTTATTTTGGAGAATAAAGAGACCTCTGGATTTGAGGTGCCATTTGGGTAGAAAGAAAAGACGTTTACACCGAGAAATAGTCTGTGTTGCCCTGAAGGAGCAGAGGGATGCATCGCTGGAGGTGACCTACAGTTGAAGAAGACTCATTATGACAGACCTTGTCCTTCTTCCTTGTGGAAAGTGTTTCCTCTGCTGCTACTGCTCATGAGACTCTTCCCCCTCCCTGTCCCAGGGAACCAAAGGGCTTTCTACCACACCCTTTCTTGCCCCCCGCCTCCCATGTCTGCTGTGCCTTTGTACTCAGCAATTCTTGTTTGCTCCATTATCTTCCAGCCGGATACAGAGTGAATAGTTAACCACACTTAGGTCAAATAGGATCTAAATTTTTGTTCCTGCTCCGTGTAAAGAGGCCAGTGTTTGTGTGTTGCAAGCAGCCTTGGAATAGTAACTCTTCTCATTTGTTTGGGATCTGGCCACCAAGTTCCAGAATGATACACGGATCAGTGCAGAAGTTCATCAGGCTCTCGGACCTTAGGGCTGTTGGAGAAGGCTTCAGCAGCAGAACTGATGGTGAAGGCTCGTGTTCTCCATCCTCAACTTTCTTTGCTTCGATCATACACAAGAATACATTTGGAAGGGCAAAAAATGAACACTGTCGTTCATTGCAGCCGTGTTTTGTGACACAGATGCACAGTCTGCTGTGAAGACCTTCTCTCAAGTGGCATTTGGGAGTCCATGCCAGATCATGGTGCTTCATGAGAGACTGACAGCTATCAGGGGTTGTGGCACTTAGTGAGGACTCTCCTCCCCCAGTGTGTGCTGATGACACATACACACCTGACAATAGCTTGAGTCTTCTCTGTTCCTTTTACTCTGTAGCCAACATACACATGATTTAAAACCCTTTCTAAATATCTATCATGGTTCATCCTTGTCCAAATGCAGAGTCAGAGCTATTTGTACTTCATTATTATTTCCAAGGCGAATAGTTGGCTTTCTTTTTGCAAAAATAATTAAAGTTTTTGTATGTTGCAGTTGCTGTGCTTGTATGACCATTTAGTGAATTTGGTGTCTTCTAAATAGAACAGTGGAGTCCTTGTGGACATCTCAGATTCATCACAAAATGATTGAGGAGAACCTCTTGAAGATGTTTAGAGCTATTGAAATTTACAGATTGTTGATGGGTTTTCACCTTTTCCTTCCTTTCTTGACACACAGTTACAGGCATTGTATTCCTTGGATTCCTACAGGTGTCAAGGAACAGAGATCCACTTACGTTACCTTCATAAATCCTGGTTTATTCAAAAGTCACAGTAAGGTAGACAGGAAATAGTCCCAGCCACTGCCTAGCTAAGCCTTTTCAAAAAGCCCAAGGTCATTCAGCAGATGCAGAAGCACTAGTTGGTTT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-SLC39A11-1]] | + | [[Category:Intergenic]][[Category:lnc-SLC39A11-1]][[Category:NONHSAG022655]] |
Revision as of 11:38, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-SLC39A11-1:8 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT055688 |
| Classification |
intergenic |
| Length |
2517 nt |
| Genomic location |
chr17-:70399094..70588931 |
| Exon number |
3 |
| Exons |
70399094..70400957,70424377..70424439,70588342..70588931 |
| Genome context |
|
| Sequence |
000001 CGGCGCGGGT GCGCGGTGCG GCGCTGGTAT CCAGAGGACG CGGTCACCGC CTCTGGCATT TGTCGTTCTG CGCTTCTCCG 000080
000081 CAAGGACCCT CTGTTAGGCA GGCGCCCACC GTAAGCCTCC CGGGCCTTGT GAACCTGCAA ACCCAAGTCT GAGAGACGAT 000160 000161 CCGCCTTCAG CGCTTTCCAG CTTGGCAGAG AGGCTTTCCC GGCGGGGATC TTTGGTTGGC GCTGGCGATG CGCGGGGAAG 000240 000241 AAAGGCGAGG AGCGGCGTCC AGGCTGGGTG ATGTCCCAGC ACGAGTAGGC GGGATGCGCT CGCTTGGTCC TCCGGGCGCC 000320 000321 CGGTCCCTGC CCGCGTCGCG CGCCCACCCC TGGGGACGAG AAGGCGGCCG CCTGAGGACC CCCGCCCGCG ACCTCCGCGA 000400 000401 GTCTGGAGCG CAGAGGACAG GGTCTGGCTG CTCTTTGGCC TTGGATGGAA AGTGGGGAAT TGGGTGGGGG GCTGCGGACC 000480 000481 CCTTAACGTG GATTACTTGG TGTGTATCAG CTGGGCTCAG AAGACCCACG ACCTCTTCTC CATCCGTGGA TTGATTTGTT 000560 000561 CTGCTTAACA GCTGGGTCGC CAAGCTGGAG GTGGAATCAG AGGTTTCTGG CTGACTCGGT GGGTGCTTTG AACCAGGAAA 000640 000641 GGACAAGAAA GAGGATGGGA AGGACTGATC CACATTCCCA CCAGGAAGTT TAGCAGAACC CCCGCGTGCC ACCTGGACCC 000720 000721 CTTGGAAGGA CCTGGCTCAG GCTGGACCAC CTCTTGAGAG GCAGGAGCTC TGGATTTGAT CAAGAATTCT TTGCTGAGCA 000800 000801 TGGTGCCTCA TGCCTATAAT CCCAACACTT TGGGAGGCCA GTGTGGGAGG ATCTCTTGAG CCCAGGAGTT CAAGACTAGC 000880 000881 CTGGGCAACA CAGAGAGACC CCATCTCTAA AATAATAATA ATAATAAAAT AAAAAATTAG CAGGGCATGG TGGCATGTGC 000960 000961 CTGTAGTCCC AGCTACCCAG GAGGCTGAGG CAAGAGGATG GCTGGAGCCT GGGATGTTGA GGCTGCAATG AACTGTGATT 001040 001041 ACCCCACTGC ACTCCAGCCT GGGCAAAAGA GCGAGAGACC CTGTCTCAAA TAATAATAAT AATAATAATC TTATTTTGGA 001120 001121 GAATAAAGAG ACCTCTGGAT TTGAGGTGCC ATTTGGGTAG AAAGAAAAGA CGTTTACACC GAGAAATAGT CTGTGTTGCC 001200 001201 CTGAAGGAGC AGAGGGATGC ATCGCTGGAG GTGACCTACA GTTGAAGAAG ACTCATTATG ACAGACCTTG TCCTTCTTCC 001280 001281 TTGTGGAAAG TGTTTCCTCT GCTGCTACTG CTCATGAGAC TCTTCCCCCT CCCTGTCCCA GGGAACCAAA GGGCTTTCTA 001360 001361 CCACACCCTT TCTTGCCCCC CGCCTCCCAT GTCTGCTGTG CCTTTGTACT CAGCAATTCT TGTTTGCTCC ATTATCTTCC 001440 001441 AGCCGGATAC AGAGTGAATA GTTAACCACA CTTAGGTCAA ATAGGATCTA AATTTTTGTT CCTGCTCCGT GTAAAGAGGC 001520 001521 CAGTGTTTGT GTGTTGCAAG CAGCCTTGGA ATAGTAACTC TTCTCATTTG TTTGGGATCT GGCCACCAAG TTCCAGAATG 001600 001601 ATACACGGAT CAGTGCAGAA GTTCATCAGG CTCTCGGACC TTAGGGCTGT TGGAGAAGGC TTCAGCAGCA GAACTGATGG 001680 001681 TGAAGGCTCG TGTTCTCCAT CCTCAACTTT CTTTGCTTCG ATCATACACA AGAATACATT TGGAAGGGCA AAAAATGAAC 001760 001761 ACTGTCGTTC ATTGCAGCCG TGTTTTGTGA CACAGATGCA CAGTCTGCTG TGAAGACCTT CTCTCAAGTG GCATTTGGGA 001840 001841 GTCCATGCCA GATCATGGTG CTTCATGAGA GACTGACAGC TATCAGGGGT TGTGGCACTT AGTGAGGACT CTCCTCCCCC 001920 001921 AGTGTGTGCT GATGACACAT ACACACCTGA CAATAGCTTG AGTCTTCTCT GTTCCTTTTA CTCTGTAGCC AACATACACA 002000 002001 TGATTTAAAA CCCTTTCTAA ATATCTATCA TGGTTCATCC TTGTCCAAAT GCAGAGTCAG AGCTATTTGT ACTTCATTAT 002080 002081 TATTTCCAAG GCGAATAGTT GGCTTTCTTT TTGCAAAAAT AATTAAAGTT TTTGTATGTT GCAGTTGCTG TGCTTGTATG 002160 002161 ACCATTTAGT GAATTTGGTG TCTTCTAAAT AGAACAGTGG AGTCCTTGTG GACATCTCAG ATTCATCACA AAATGATTGA 002240 002241 GGAGAACCTC TTGAAGATGT TTAGAGCTAT TGAAATTTAC AGATTGTTGA TGGGTTTTCA CCTTTTCCTT CCTTTCTTGA 002320 002321 CACACAGTTA CAGGCATTGT ATTCCTTGGA TTCCTACAGG TGTCAAGGAA CAGAGATCCA CTTACGTTAC CTTCATAAAT 002400 002401 CCTGGTTTAT TCAAAAGTCA CAGTAAGGTA GACAGGAAAT AGTCCCAGCC ACTGCCTAGC TAAGCCTTTT CAAAAAGCCC 002480 002481 AAGGTCATTC AGCAGATGCA GAAGCACTAG TTGGTTT |
