Difference between revisions of "NONHSAT113626"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>acatGATGCTATTTTCTGACTGCTATTATAAGTACACTACTGTCAgccgggcgcggtggctcacgcctgtaatcccagcactttgggaggctgagacaggcagatcacgaggtcaggagatcaagaccatcctggctaacacagtgaaagcccatctctactaaaaatacaaaaaattagctgggcgtggtggtgggcgcctgtagtcctagctactcgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgaggtcatgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaGAAAGAATACCCACCTCATGTCCAAAAAGTTGAAATTAATCCTGTAAGGTTAAGTCGGCTCCAAGGTGTTGAACGTATAATGAAGAAAACAGAAGAGTCCGAATCACAAGTGGAGCCTGAAATTAAGAGGAAAGTACAACAGAAACGACACTGTAGTACCTATCAGCCTACTCCTCCTCTATCTCCTGCTTCAAAAAAATGTTTAACCCATTTAGAGGATTTGCAAAGAAATTGCAGACAAGCTATTACTTTGA</dnaseq>| | sequence = <dnaseq>acatGATGCTATTTTCTGACTGCTATTATAAGTACACTACTGTCAgccgggcgcggtggctcacgcctgtaatcccagcactttgggaggctgagacaggcagatcacgaggtcaggagatcaagaccatcctggctaacacagtgaaagcccatctctactaaaaatacaaaaaattagctgggcgtggtggtgggcgcctgtagtcctagctactcgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgaggtcatgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaGAAAGAATACCCACCTCATGTCCAAAAAGTTGAAATTAATCCTGTAAGGTTAAGTCGGCTCCAAGGTGTTGAACGTATAATGAAGAAAACAGAAGAGTCCGAATCACAAGTGGAGCCTGAAATTAAGAGGAAAGTACAACAGAAACGACACTGTAGTACCTATCAGCCTACTCCTCCTCTATCTCCTGCTTCAAAAAAATGTTTAACCCATTTAGAGGATTTGCAAAGAAATTGCAGACAAGCTATTACTTTGA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG044163]] |
Revision as of 11:48, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT113626 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
595 nt |
| Genomic location |
chr6+:76356227..76372973 |
| Exon number |
4 |
| Exons |
76356227..76356567,76357447..76357517,76368978..76369123,76372937..76372973 |
| Genome context |
|
| Sequence |
000001 acatGATGCT ATTTTCTGAC TGCTATTATA AGTACACTAC TGTCAgccgg gcgcggtggc tcacgcctgt aatcccagca 000080
000081 ctttgggagg ctgagacagg cagatcacga ggtcaggaga tcaagaccat cctggctaac acagtgaaag cccatctcta 000160 000161 ctaaaaatac aaaaaattag ctgggcgtgg tggtgggcgc ctgtagtcct agctactcgg gaggctgagg caggagaatg 000240 000241 gcatgaacct gggaggcgga gcttgcagtg agccgaggtc atgccactgc actccagcct gggcgacaga gcgagactcc 000320 000321 gtctcaaaaa aaaaaaaaaa aGAAAGAATA CCCACCTCAT GTCCAAAAAG TTGAAATTAA TCCTGTAAGG TTAAGTCGGC 000400 000401 TCCAAGGTGT TGAACGTATA ATGAAGAAAA CAGAAGAGTC CGAATCACAA GTGGAGCCTG AAATTAAGAG GAAAGTACAA 000480 000481 CAGAAACGAC ACTGTAGTAC CTATCAGCCT ACTCCTCCTC TATCTCCTGC TTCAAAAAAA TGTTTAACCC ATTTAGAGGA 000560 000561 TTTGCAAAGA AATTGCAGAC AAGCTATTAC TTTGA |
Predicted Small Protein
| Name | NONHSAT113626_smProtein_2:163 |
| Length | 54 |
| Molecular weight | 6181.1284 |
| Aromaticity | 0.132075471698 |
| Instability index | 52.2301886792 |
| Isoelectric point | 9.35821533203 |
| Runs | 11 |
| Runs residual | 0.047284859641 |
| Runs probability | 0.0310738546033 |
| Amino acid sequence | MMLFSDCYYKYTTVSRARWLTPVIPALWEAETGRSRGQEIKTILANTVKAHLY |
| Secondary structure | LEEEELEEEEEEEELLLEELLLLLHHHHHHLLLLLLHHHHHHHHHHHHHHHLL |
| PRMN | - |
| PiMo | - |
