Difference between revisions of "NONHSAT133004"

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sequence = <dnaseq>AGTTTGCAAACCCATTGCAAACCCATAGTTTGCAAATCAGACTCAAGAATGATCTTCAGTATTGGTGGTTTTGTGTGGGTTTTGTTTGTTATTTTTATTTGTTTTTGAGACTTCGTTATTGGCACAACAGCTTCTGGAAATCTGTTTCACAGAGAGTATGGGGGCTTCTTTGGCCAAATGGAGTGGGTACTTATGAGTTCGGTCAGTGCCTGAGGGAGCACTCACTTCCTTGCCTGGTCATATTTTCATTGGTGCAGGCTCCGTCTGCTTGGCAGCCACTGTTTGGGCCACAGCCTGTCCGCAGGGTCCTGCTCCTCTCTAATTTGTTCAGACATTGTGGTGTGTCTGGCCATATCATTTGTCATAGGTGTAAAAACAATCACAACCAAAGCTTAAAGCTGTTGGGATGAGCAGCTGCCTGGGAATCACGCTCCTTCCTGCTCTTTCCAAAAAGCCAGGTGCCGCCGGCCAGCATCCCGCTCCCTTTGACCCGCAGTCTGTGCGGGAAGTAGGCCCGGAGTGGTGCCAGCAGGAGGTGGCCTTAGAAAGGCGGAGACCCAAGGAGCAGAGTGAGTCGGCGTCCAGCTCCACCTGAAAGCGCCATCTTGTCGCCACTTCCCTCAGGAGCAGCATGCCCAGCCTCTTGCATAGGAAGAAGTGGTAAGCTAAGGAGAGAAATGCAGGGTTCCTAGTACACCAATTTTCCAACTTTTTCATCTTGGCCCTGCTTTAAAATGATGCATCTACTGTCTTCATGCCTCAGCACAGCAGAGAAAACCATGCTGTGTTCCAGTTTACTTTGAATGTTTCAGTGAAAATGATGAAGCTGAAAAAATGACGGAGGCCCGTTTTACATTGCATTTCTCAGAGTCATCGCCTCTGCTGCAGATGGAACAACAGCCATGGAGAATGAGGGTCACCTGAATGTGGAAAAGTTGAGTTGGAGCAAAACTGGCACGGCCATACTGGATGGACCTCAGCATGACCAGGACACATTTCAGCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACCACCACCTCTTCCCACAACTAGAGCTGGCTTACCAGAGCACCGATGGACTTGGATACCTGAGATATCTGCTTGGGATCCCACACTTTCAAGGTCTCTCCTCTGGCCTTCTTCTGGTTCTGCGACTCCTTACAGCGCTGGGAGTTGGTGATGCCAACAGGACATACGCTCCCAGAGCCTACCTCTCCCAGATCACTTTAAAAGGCACCCAGGACCCCAGAATTCTCATCCTCAAAGGCATGGAGCTCAGCTCTTGGCCCTCAACAAATCTCTTCCCCATAAAGATCCTTTTGAGAGCTTAGGATGTCCCCCGGATGGTTTTGGTTGCAGATTGTGGTGGTGGAGGGAGCTATACAATTTAATCTATTGCCATTAATTGGATGCGCTAATGGCAGATTGGGTAGTGATAATGCCATAAGAGGTAGTGTGTGAGCCGTGTGCTGCATCTGTGCTAGCTCAGGTAAGTCAGCACACAGCACCTGCAGCCTCCTCTCACCTCTTCCCTGAGCAGCACCTTTTCACCTGAACATGCTGATCCCCTAGTGCTTCATCTTGACAGCAACTTAACAAGCCCTGGGCAGCTTTTTAAAATAAATGACTATGATATTGACTATGAATCTACATAAAAGCCACTTGTTTTTTAGTCATAATCTGTGTCTAACTGCAGAAGAAATTCACACCTTTGAAAAACAAATAAAAATGTAAAAAGTGAAAATTGTTTGTAACCACAATATTCTGAAATAGAACCTTTTTGTTAGATCATTTTCAAGAGGATTTTTCATACTTTCCTACAGTAATACCAATGTATATGCACTTGTATAAATTCTTGGTTAAAATATTCATAGGGTGTATGTGTCTAAATATAGAATCATACCCTATTGTACAGTTCTAGTAAATAGCTATTTTTTTGCTTTTAACTCAGAAAATATATATTTGTATTATGCTTTACGTTCTGGGATACATGTGCGGAACGTGCAGTTTTGTTGCATTGGTATATACGTGCCATGGTGGTTTGCTGCACCCACCAACCCATCATCTACATTAGGTATTTCTCCTAATGCTATCCCTCCCCTAGCCCCCACTCCCTGACAGGCCCCAGTGTGTGATGTTCCCCTCCCTGTCTGTGTCCATGTGTTTGCATTGTTGAACTCCCACTTATGAGTGAGAACATGCAGTGTTTGTACCTGTGTTAGTTTGCTGAGAATTATTGTTTCCAGCTTTGTCCATGTCCCTGCAAAGACATGAACTCATCCTTTTTTATGGCTGCACAGTATTCCATTGTGTATATGTGCTACATTTTCTTTATCGAGTCTATCATTGATGGGCATTTGGGCTGGTTCAAAGTCTTTGCTATTGTGAACAGTGCTGCAATAAACATAAAGTATGCATGTGT</dnaseq>|
 
sequence = <dnaseq>AGTTTGCAAACCCATTGCAAACCCATAGTTTGCAAATCAGACTCAAGAATGATCTTCAGTATTGGTGGTTTTGTGTGGGTTTTGTTTGTTATTTTTATTTGTTTTTGAGACTTCGTTATTGGCACAACAGCTTCTGGAAATCTGTTTCACAGAGAGTATGGGGGCTTCTTTGGCCAAATGGAGTGGGTACTTATGAGTTCGGTCAGTGCCTGAGGGAGCACTCACTTCCTTGCCTGGTCATATTTTCATTGGTGCAGGCTCCGTCTGCTTGGCAGCCACTGTTTGGGCCACAGCCTGTCCGCAGGGTCCTGCTCCTCTCTAATTTGTTCAGACATTGTGGTGTGTCTGGCCATATCATTTGTCATAGGTGTAAAAACAATCACAACCAAAGCTTAAAGCTGTTGGGATGAGCAGCTGCCTGGGAATCACGCTCCTTCCTGCTCTTTCCAAAAAGCCAGGTGCCGCCGGCCAGCATCCCGCTCCCTTTGACCCGCAGTCTGTGCGGGAAGTAGGCCCGGAGTGGTGCCAGCAGGAGGTGGCCTTAGAAAGGCGGAGACCCAAGGAGCAGAGTGAGTCGGCGTCCAGCTCCACCTGAAAGCGCCATCTTGTCGCCACTTCCCTCAGGAGCAGCATGCCCAGCCTCTTGCATAGGAAGAAGTGGTAAGCTAAGGAGAGAAATGCAGGGTTCCTAGTACACCAATTTTCCAACTTTTTCATCTTGGCCCTGCTTTAAAATGATGCATCTACTGTCTTCATGCCTCAGCACAGCAGAGAAAACCATGCTGTGTTCCAGTTTACTTTGAATGTTTCAGTGAAAATGATGAAGCTGAAAAAATGACGGAGGCCCGTTTTACATTGCATTTCTCAGAGTCATCGCCTCTGCTGCAGATGGAACAACAGCCATGGAGAATGAGGGTCACCTGAATGTGGAAAAGTTGAGTTGGAGCAAAACTGGCACGGCCATACTGGATGGACCTCAGCATGACCAGGACACATTTCAGCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACCACCACCTCTTCCCACAACTAGAGCTGGCTTACCAGAGCACCGATGGACTTGGATACCTGAGATATCTGCTTGGGATCCCACACTTTCAAGGTCTCTCCTCTGGCCTTCTTCTGGTTCTGCGACTCCTTACAGCGCTGGGAGTTGGTGATGCCAACAGGACATACGCTCCCAGAGCCTACCTCTCCCAGATCACTTTAAAAGGCACCCAGGACCCCAGAATTCTCATCCTCAAAGGCATGGAGCTCAGCTCTTGGCCCTCAACAAATCTCTTCCCCATAAAGATCCTTTTGAGAGCTTAGGATGTCCCCCGGATGGTTTTGGTTGCAGATTGTGGTGGTGGAGGGAGCTATACAATTTAATCTATTGCCATTAATTGGATGCGCTAATGGCAGATTGGGTAGTGATAATGCCATAAGAGGTAGTGTGTGAGCCGTGTGCTGCATCTGTGCTAGCTCAGGTAAGTCAGCACACAGCACCTGCAGCCTCCTCTCACCTCTTCCCTGAGCAGCACCTTTTCACCTGAACATGCTGATCCCCTAGTGCTTCATCTTGACAGCAACTTAACAAGCCCTGGGCAGCTTTTTAAAATAAATGACTATGATATTGACTATGAATCTACATAAAAGCCACTTGTTTTTTAGTCATAATCTGTGTCTAACTGCAGAAGAAATTCACACCTTTGAAAAACAAATAAAAATGTAAAAAGTGAAAATTGTTTGTAACCACAATATTCTGAAATAGAACCTTTTTGTTAGATCATTTTCAAGAGGATTTTTCATACTTTCCTACAGTAATACCAATGTATATGCACTTGTATAAATTCTTGGTTAAAATATTCATAGGGTGTATGTGTCTAAATATAGAATCATACCCTATTGTACAGTTCTAGTAAATAGCTATTTTTTTGCTTTTAACTCAGAAAATATATATTTGTATTATGCTTTACGTTCTGGGATACATGTGCGGAACGTGCAGTTTTGTTGCATTGGTATATACGTGCCATGGTGGTTTGCTGCACCCACCAACCCATCATCTACATTAGGTATTTCTCCTAATGCTATCCCTCCCCTAGCCCCCACTCCCTGACAGGCCCCAGTGTGTGATGTTCCCCTCCCTGTCTGTGTCCATGTGTTTGCATTGTTGAACTCCCACTTATGAGTGAGAACATGCAGTGTTTGTACCTGTGTTAGTTTGCTGAGAATTATTGTTTCCAGCTTTGTCCATGTCCCTGCAAAGACATGAACTCATCCTTTTTTATGGCTGCACAGTATTCCATTGTGTATATGTGCTACATTTTCTTTATCGAGTCTATCATTGATGGGCATTTGGGCTGGTTCAAAGTCTTTGCTATTGTGAACAGTGCTGCAATAAACATAAAGTATGCATGTGT</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:NONHSAG052805]]

Revision as of 11:56, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT133004

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2431 nt

Genomic location

chr9-:93224714..93345439

Exon number

6

Exons

93224714..93226084,93263921..93264066,93268005..93268062,93269540..93269622,93271081..93271223,93344810..93345439

Genome context

Sequence
000001 AGTTTGCAAA CCCATTGCAA ACCCATAGTT TGCAAATCAG ACTCAAGAAT GATCTTCAGT ATTGGTGGTT TTGTGTGGGT 000080
000081 TTTGTTTGTT ATTTTTATTT GTTTTTGAGA CTTCGTTATT GGCACAACAG CTTCTGGAAA TCTGTTTCAC AGAGAGTATG 000160
000161 GGGGCTTCTT TGGCCAAATG GAGTGGGTAC TTATGAGTTC GGTCAGTGCC TGAGGGAGCA CTCACTTCCT TGCCTGGTCA 000240
000241 TATTTTCATT GGTGCAGGCT CCGTCTGCTT GGCAGCCACT GTTTGGGCCA CAGCCTGTCC GCAGGGTCCT GCTCCTCTCT 000320
000321 AATTTGTTCA GACATTGTGG TGTGTCTGGC CATATCATTT GTCATAGGTG TAAAAACAAT CACAACCAAA GCTTAAAGCT 000400
000401 GTTGGGATGA GCAGCTGCCT GGGAATCACG CTCCTTCCTG CTCTTTCCAA AAAGCCAGGT GCCGCCGGCC AGCATCCCGC 000480
000481 TCCCTTTGAC CCGCAGTCTG TGCGGGAAGT AGGCCCGGAG TGGTGCCAGC AGGAGGTGGC CTTAGAAAGG CGGAGACCCA 000560
000561 AGGAGCAGAG TGAGTCGGCG TCCAGCTCCA CCTGAAAGCG CCATCTTGTC GCCACTTCCC TCAGGAGCAG CATGCCCAGC 000640
000641 CTCTTGCATA GGAAGAAGTG GTAAGCTAAG GAGAGAAATG CAGGGTTCCT AGTACACCAA TTTTCCAACT TTTTCATCTT 000720
000721 GGCCCTGCTT TAAAATGATG CATCTACTGT CTTCATGCCT CAGCACAGCA GAGAAAACCA TGCTGTGTTC CAGTTTACTT 000800
000801 TGAATGTTTC AGTGAAAATG ATGAAGCTGA AAAAATGACG GAGGCCCGTT TTACATTGCA TTTCTCAGAG TCATCGCCTC 000880
000881 TGCTGCAGAT GGAACAACAG CCATGGAGAA TGAGGGTCAC CTGAATGTGG AAAAGTTGAG TTGGAGCAAA ACTGGCACGG 000960
000961 CCATACTGGA TGGACCTCAG CATGACCAGG ACACATTTCA GCTCAAATCC CCTGTGCCAA GAACACATTC TGCCAAGGAC 001040
001041 CACCACCTCT TCCCACAACT AGAGCTGGCT TACCAGAGCA CCGATGGACT TGGATACCTG AGATATCTGC TTGGGATCCC 001120
001121 ACACTTTCAA GGTCTCTCCT CTGGCCTTCT TCTGGTTCTG CGACTCCTTA CAGCGCTGGG AGTTGGTGAT GCCAACAGGA 001200
001201 CATACGCTCC CAGAGCCTAC CTCTCCCAGA TCACTTTAAA AGGCACCCAG GACCCCAGAA TTCTCATCCT CAAAGGCATG 001280
001281 GAGCTCAGCT CTTGGCCCTC AACAAATCTC TTCCCCATAA AGATCCTTTT GAGAGCTTAG GATGTCCCCC GGATGGTTTT 001360
001361 GGTTGCAGAT TGTGGTGGTG GAGGGAGCTA TACAATTTAA TCTATTGCCA TTAATTGGAT GCGCTAATGG CAGATTGGGT 001440
001441 AGTGATAATG CCATAAGAGG TAGTGTGTGA GCCGTGTGCT GCATCTGTGC TAGCTCAGGT AAGTCAGCAC ACAGCACCTG 001520
001521 CAGCCTCCTC TCACCTCTTC CCTGAGCAGC ACCTTTTCAC CTGAACATGC TGATCCCCTA GTGCTTCATC TTGACAGCAA 001600
001601 CTTAACAAGC CCTGGGCAGC TTTTTAAAAT AAATGACTAT GATATTGACT ATGAATCTAC ATAAAAGCCA CTTGTTTTTT 001680
001681 AGTCATAATC TGTGTCTAAC TGCAGAAGAA ATTCACACCT TTGAAAAACA AATAAAAATG TAAAAAGTGA AAATTGTTTG 001760
001761 TAACCACAAT ATTCTGAAAT AGAACCTTTT TGTTAGATCA TTTTCAAGAG GATTTTTCAT ACTTTCCTAC AGTAATACCA 001840
001841 ATGTATATGC ACTTGTATAA ATTCTTGGTT AAAATATTCA TAGGGTGTAT GTGTCTAAAT ATAGAATCAT ACCCTATTGT 001920
001921 ACAGTTCTAG TAAATAGCTA TTTTTTTGCT TTTAACTCAG AAAATATATA TTTGTATTAT GCTTTACGTT CTGGGATACA 002000
002001 TGTGCGGAAC GTGCAGTTTT GTTGCATTGG TATATACGTG CCATGGTGGT TTGCTGCACC CACCAACCCA TCATCTACAT 002080
002081 TAGGTATTTC TCCTAATGCT ATCCCTCCCC TAGCCCCCAC TCCCTGACAG GCCCCAGTGT GTGATGTTCC CCTCCCTGTC 002160
002161 TGTGTCCATG TGTTTGCATT GTTGAACTCC CACTTATGAG TGAGAACATG CAGTGTTTGT ACCTGTGTTA GTTTGCTGAG 002240
002241 AATTATTGTT TCCAGCTTTG TCCATGTCCC TGCAAAGACA TGAACTCATC CTTTTTTATG GCTGCACAGT ATTCCATTGT 002320
002321 GTATATGTGC TACATTTTCT TTATCGAGTC TATCATTGAT GGGCATTTGG GCTGGTTCAA AGTCTTTGCT ATTGTGAACA 002400
002401 GTGCTGCAAT AAACATAAAG TATGCATGTG T
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