Difference between revisions of "NONHSAT091239"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>atttttgctttggttgcctgtgcttttgaggtcttTGTGTACAGGTTTTTGTGTGGATGGATGTTTTCTTGGAAGCTAACTTTTCGAACCAGACATCTAGTAGCGTTTTTGTGGCTTTCTGGACGTTCAACTCTTTGAACAGTTGAACTGTGGGAATCTTGCCCATGTCCTGCCTCACCTTCCTCCAGGGAACTCCGGCCGAATCCCGGGAGAAGAACCGCGAGTGCATTCTGCTGGATTTCTTCGATGACCATGACATCTGGCACTTCCTCTCTGCTACTGCTCTGTTTTTCTCATTCTTGGTTTTGTTAACTTTGGATGATGACCTTGATGTGGTTCGGAGAGACCAGATCCCTGTCTTCTGAACCTCCAACATTAAGAGAGGGGAGGGAGCGATCAATCTTGGTGCTGTTTCACAAAAATTACAGTGACCACAGCAAAGTAACCACTGCCAGATGCTCCACTCACCCTCTGTAGAGCCAACTCTGCATTCACACAGGAAGGAGAGGGGCTGCGGGAGATTTAAACCTGCAAGAAAGGAGGCAGAAGGGGAGCCATGTTTTGAGGACAGACGCAA</dnaseq>| | sequence = <dnaseq>atttttgctttggttgcctgtgcttttgaggtcttTGTGTACAGGTTTTTGTGTGGATGGATGTTTTCTTGGAAGCTAACTTTTCGAACCAGACATCTAGTAGCGTTTTTGTGGCTTTCTGGACGTTCAACTCTTTGAACAGTTGAACTGTGGGAATCTTGCCCATGTCCTGCCTCACCTTCCTCCAGGGAACTCCGGCCGAATCCCGGGAGAAGAACCGCGAGTGCATTCTGCTGGATTTCTTCGATGACCATGACATCTGGCACTTCCTCTCTGCTACTGCTCTGTTTTTCTCATTCTTGGTTTTGTTAACTTTGGATGATGACCTTGATGTGGTTCGGAGAGACCAGATCCCTGTCTTCTGAACCTCCAACATTAAGAGAGGGGAGGGAGCGATCAATCTTGGTGCTGTTTCACAAAAATTACAGTGACCACAGCAAAGTAACCACTGCCAGATGCTCCACTCACCCTCTGTAGAGCCAACTCTGCATTCACACAGGAAGGAGAGGGGCTGCGGGAGATTTAAACCTGCAAGAAAGGAGGCAGAAGGGGAGCCATGTTTTGAGGACAGACGCAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG035766]] |
Revision as of 11:58, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT091239 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
577 nt |
| Genomic location |
chr3+:113344761..113346767 |
| Exon number |
2 |
| Exons |
113344761..113345062,113346493..113346767 |
| Genome context |
|
| Sequence |
000001 atttttgctt tggttgcctg tgcttttgag gtcttTGTGT ACAGGTTTTT GTGTGGATGG ATGTTTTCTT GGAAGCTAAC 000080
000081 TTTTCGAACC AGACATCTAG TAGCGTTTTT GTGGCTTTCT GGACGTTCAA CTCTTTGAAC AGTTGAACTG TGGGAATCTT 000160 000161 GCCCATGTCC TGCCTCACCT TCCTCCAGGG AACTCCGGCC GAATCCCGGG AGAAGAACCG CGAGTGCATT CTGCTGGATT 000240 000241 TCTTCGATGA CCATGACATC TGGCACTTCC TCTCTGCTAC TGCTCTGTTT TTCTCATTCT TGGTTTTGTT AACTTTGGAT 000320 000321 GATGACCTTG ATGTGGTTCG GAGAGACCAG ATCCCTGTCT TCTGAACCTC CAACATTAAG AGAGGGGAGG GAGCGATCAA 000400 000401 TCTTGGTGCT GTTTCACAAA AATTACAGTG ACCACAGCAA AGTAACCACT GCCAGATGCT CCACTCACCC TCTGTAGAGC 000480 000481 CAACTCTGCA TTCACACAGG AAGGAGAGGG GCTGCGGGAG ATTTAAACCT GCAAGAAAGG AGGCAGAAGG GGAGCCATGT 000560 000561 TTTGAGGACA GACGCAA |
Predicted Small Protein
| Name | NONHSAT091239_smProtein_164:364 |
| Length | 67 |
| Molecular weight | 7737.7513 |
| Aromaticity | 0.136363636364 |
| Instability index | 62.1212121212 |
| Isoelectric point | 4.31524658203 |
| Runs | 11 |
| Runs residual | 0.0160587915079 |
| Runs probability | 0.0808080808082 |
| Amino acid sequence | MSCLTFLQGTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDDLDVVRR DQIPVF |
| Secondary structure | LEEELLLLLLLHHHHHHLLLLHHHHHLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLHHHH HLLLLL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL LLLLLL |
| PiMo | ooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii iiiiii |
