Difference between revisions of "ENST00000411861.1"

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sequence = <dnaseq>ATGGGCCCGTTCCAGGCAGAAAGAGCAAGAGGGCAGGGAGGGAGCACAGGGGTGGCCAGCGTAGGGTCCAGCACGTGGGGTGGTACCCCAGGCCTGGGTCAGACAGGGACATGGCAGGGGACACAGGACAGAGGGGTCCCCAGCTGCCACCTCACCCACCGCAATTCATTTAGTAGCAGGCACAGGGGCAGCTCCGGCACGGCTTTCTCAGGCCTATGCCGGAGCCTCGAGGGCTGGAGAGCGGGAAGACAGGCAGTGCTCGGGGAGTTGCAGCAGGACGTCACCAGGAGGGCGAAGCGGCCACGGGAGGGGGGCCCCGGGACATTGCGCAGCAAGGAGGCTGCAGGGGCTCGGCCTGCGGGCGCCGGTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTGGCAGACAGTACAGCATCCAGGGGAGTCAAGGGCATGGGGCGAGACCAGACTAGGCGAGGCGGGCGGGGCGGAGTGAATGAGCTCTCAGGAGGGAGGATGGTGCAGGCAGGGGTGAGGAGCGCAGCGGGCGGCGAGCGGGAGGCACTGGCCTCCAGAGCCCGTGGCCAAGGCGGGCCTCGCGGGCGGCGACGGAGCCGGGATCGGTGCCTCAGCGTTCGGGCTGGAGACGAGGCCAGGTCTCCAGCTGGGGTGGACGTGCCCACCAGCTGCCGAAGGCCAAGACGCCAGGTCCGGTGGACGTGACAAGCAGGACATGACATGGTCCGGTGTGACGGCGAGGACAGAGGAGGCGCGTCCGGCCTTCCTGAACACCTTAGGCTGGTGGGGCTGCGGCAAGAAGCGGGTCTGTTTCTTTACTTCCTCCACGGAGTCGGCACACTATGGCTGCCCTCTGGGCTCCCAGAACCCACAACATGAAAGAAATGGTGCTACCCAGCTCAAGCCTGGGCCTTTGAATCCGGACACAAAACCCTCTAGCTTGGAAATGAATATGCTGCACTTTACAACCACTGCACTACCTGACTCAGGAATCGGCTCTGGAAGGTGAGCACCAGCGCTCCTTCCGGAAGCCTCCAGGCCCCCGAGCACCCTGCCCCCATCCCACCCACGTGTCGCTATCTCTAGGTGAAGCTAGAGGAACCAGACCTCATCAGCCCAACATCAAAGACACCATCGGAACAGCAGCGCCCGCAGCACCCACCCCGCACCGGCGACTCCATCTTCATGGCCACCCCCTGCGGCGGACGGTTGACCACCAGCCACCACATCATCCCAGAGCTGAGCTCCTCCAGCGGGATGACGCCGTCCCCACCACCTCCCTCTTCTTCTTTTTCATCCTTCTGTCTCTTTGTTTCTGAGCTTTCCTGTCTTTCCTTTTTTCTGAGAGATTCAAAGCCTCCACGACTCTGTTTCCCCCGTCCCTTCTGAATTTAATTTGCACTAAGTCATTTGCACTGGTTGGAGTTGTGGAGACGGCCTTGAGTCTCAGTACGAGTGTGCGTGAGTGTGAGCCACCTTGGCAAGTGCCTGTGCAGGGCCCGGCCGCCCTCCATCTGGGCCGGGTGACTGGGCGCCGGCTGTGTGCCCGAGGCCTCACCCTGCCCTCGCCTAGTCTGGAAGCTCCGACCGACATCACGGAGCAGCCTTCAAGCATTCCATTACGCCCCATCTCGCTCTGTGCCCCTCCCCACCAGGGCTTCAGCAGGAGCCCTGGACTCATCATCAATAAACACTGTTACAGCAA</dnaseq>|
 
sequence = <dnaseq>ATGGGCCCGTTCCAGGCAGAAAGAGCAAGAGGGCAGGGAGGGAGCACAGGGGTGGCCAGCGTAGGGTCCAGCACGTGGGGTGGTACCCCAGGCCTGGGTCAGACAGGGACATGGCAGGGGACACAGGACAGAGGGGTCCCCAGCTGCCACCTCACCCACCGCAATTCATTTAGTAGCAGGCACAGGGGCAGCTCCGGCACGGCTTTCTCAGGCCTATGCCGGAGCCTCGAGGGCTGGAGAGCGGGAAGACAGGCAGTGCTCGGGGAGTTGCAGCAGGACGTCACCAGGAGGGCGAAGCGGCCACGGGAGGGGGGCCCCGGGACATTGCGCAGCAAGGAGGCTGCAGGGGCTCGGCCTGCGGGCGCCGGTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTGGCAGACAGTACAGCATCCAGGGGAGTCAAGGGCATGGGGCGAGACCAGACTAGGCGAGGCGGGCGGGGCGGAGTGAATGAGCTCTCAGGAGGGAGGATGGTGCAGGCAGGGGTGAGGAGCGCAGCGGGCGGCGAGCGGGAGGCACTGGCCTCCAGAGCCCGTGGCCAAGGCGGGCCTCGCGGGCGGCGACGGAGCCGGGATCGGTGCCTCAGCGTTCGGGCTGGAGACGAGGCCAGGTCTCCAGCTGGGGTGGACGTGCCCACCAGCTGCCGAAGGCCAAGACGCCAGGTCCGGTGGACGTGACAAGCAGGACATGACATGGTCCGGTGTGACGGCGAGGACAGAGGAGGCGCGTCCGGCCTTCCTGAACACCTTAGGCTGGTGGGGCTGCGGCAAGAAGCGGGTCTGTTTCTTTACTTCCTCCACGGAGTCGGCACACTATGGCTGCCCTCTGGGCTCCCAGAACCCACAACATGAAAGAAATGGTGCTACCCAGCTCAAGCCTGGGCCTTTGAATCCGGACACAAAACCCTCTAGCTTGGAAATGAATATGCTGCACTTTACAACCACTGCACTACCTGACTCAGGAATCGGCTCTGGAAGGTGAGCACCAGCGCTCCTTCCGGAAGCCTCCAGGCCCCCGAGCACCCTGCCCCCATCCCACCCACGTGTCGCTATCTCTAGGTGAAGCTAGAGGAACCAGACCTCATCAGCCCAACATCAAAGACACCATCGGAACAGCAGCGCCCGCAGCACCCACCCCGCACCGGCGACTCCATCTTCATGGCCACCCCCTGCGGCGGACGGTTGACCACCAGCCACCACATCATCCCAGAGCTGAGCTCCTCCAGCGGGATGACGCCGTCCCCACCACCTCCCTCTTCTTCTTTTTCATCCTTCTGTCTCTTTGTTTCTGAGCTTTCCTGTCTTTCCTTTTTTCTGAGAGATTCAAAGCCTCCACGACTCTGTTTCCCCCGTCCCTTCTGAATTTAATTTGCACTAAGTCATTTGCACTGGTTGGAGTTGTGGAGACGGCCTTGAGTCTCAGTACGAGTGTGCGTGAGTGTGAGCCACCTTGGCAAGTGCCTGTGCAGGGCCCGGCCGCCCTCCATCTGGGCCGGGTGACTGGGCGCCGGCTGTGTGCCCGAGGCCTCACCCTGCCCTCGCCTAGTCTGGAAGCTCCGACCGACATCACGGAGCAGCCTTCAAGCATTCCATTACGCCCCATCTCGCTCTGTGCCCCTCCCCACCAGGGCTTCAGCAGGAGCCCTGGACTCATCATCAATAAACACTGTTACAGCAA</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-C11orf89-2]]
+
[[Category:Intergenic]][[Category:lnc-C11orf89-2]][[Category:NONHSAG007409]]

Revision as of 11:59, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000411861.1

Source

Gencode19

Same with

lnc-C11orf89-2:10,NONHSAT017460

Classification

intergenic

Length

1771 nt

Genomic location

chr11-:2016406..2018447

Exon number

4

Exons

2016406..2017228,2017309..2017421,2017517..2017651,2017748..2018447

Genome context

Sequence
000001 ATGGGCCCGT TCCAGGCAGA AAGAGCAAGA GGGCAGGGAG GGAGCACAGG GGTGGCCAGC GTAGGGTCCA GCACGTGGGG 000080
000081 TGGTACCCCA GGCCTGGGTC AGACAGGGAC ATGGCAGGGG ACACAGGACA GAGGGGTCCC CAGCTGCCAC CTCACCCACC 000160
000161 GCAATTCATT TAGTAGCAGG CACAGGGGCA GCTCCGGCAC GGCTTTCTCA GGCCTATGCC GGAGCCTCGA GGGCTGGAGA 000240
000241 GCGGGAAGAC AGGCAGTGCT CGGGGAGTTG CAGCAGGACG TCACCAGGAG GGCGAAGCGG CCACGGGAGG GGGGCCCCGG 000320
000321 GACATTGCGC AGCAAGGAGG CTGCAGGGGC TCGGCCTGCG GGCGCCGGTC CCACGAGGCA CTGCGGCCCA GGGTCTGGTG 000400
000401 CGGAGAGGGC CCACAGTGGA CTTGGTGACG CTGTATGCCC TCACCGCTCA GCCCCTGGGG CTGGCTTGGC AGACAGTACA 000480
000481 GCATCCAGGG GAGTCAAGGG CATGGGGCGA GACCAGACTA GGCGAGGCGG GCGGGGCGGA GTGAATGAGC TCTCAGGAGG 000560
000561 GAGGATGGTG CAGGCAGGGG TGAGGAGCGC AGCGGGCGGC GAGCGGGAGG CACTGGCCTC CAGAGCCCGT GGCCAAGGCG 000640
000641 GGCCTCGCGG GCGGCGACGG AGCCGGGATC GGTGCCTCAG CGTTCGGGCT GGAGACGAGG CCAGGTCTCC AGCTGGGGTG 000720
000721 GACGTGCCCA CCAGCTGCCG AAGGCCAAGA CGCCAGGTCC GGTGGACGTG ACAAGCAGGA CATGACATGG TCCGGTGTGA 000800
000801 CGGCGAGGAC AGAGGAGGCG CGTCCGGCCT TCCTGAACAC CTTAGGCTGG TGGGGCTGCG GCAAGAAGCG GGTCTGTTTC 000880
000881 TTTACTTCCT CCACGGAGTC GGCACACTAT GGCTGCCCTC TGGGCTCCCA GAACCCACAA CATGAAAGAA ATGGTGCTAC 000960
000961 CCAGCTCAAG CCTGGGCCTT TGAATCCGGA CACAAAACCC TCTAGCTTGG AAATGAATAT GCTGCACTTT ACAACCACTG 001040
001041 CACTACCTGA CTCAGGAATC GGCTCTGGAA GGTGAGCACC AGCGCTCCTT CCGGAAGCCT CCAGGCCCCC GAGCACCCTG 001120
001121 CCCCCATCCC ACCCACGTGT CGCTATCTCT AGGTGAAGCT AGAGGAACCA GACCTCATCA GCCCAACATC AAAGACACCA 001200
001201 TCGGAACAGC AGCGCCCGCA GCACCCACCC CGCACCGGCG ACTCCATCTT CATGGCCACC CCCTGCGGCG GACGGTTGAC 001280
001281 CACCAGCCAC CACATCATCC CAGAGCTGAG CTCCTCCAGC GGGATGACGC CGTCCCCACC ACCTCCCTCT TCTTCTTTTT 001360
001361 CATCCTTCTG TCTCTTTGTT TCTGAGCTTT CCTGTCTTTC CTTTTTTCTG AGAGATTCAA AGCCTCCACG ACTCTGTTTC 001440
001441 CCCCGTCCCT TCTGAATTTA ATTTGCACTA AGTCATTTGC ACTGGTTGGA GTTGTGGAGA CGGCCTTGAG TCTCAGTACG 001520
001521 AGTGTGCGTG AGTGTGAGCC ACCTTGGCAA GTGCCTGTGC AGGGCCCGGC CGCCCTCCAT CTGGGCCGGG TGACTGGGCG 001600
001601 CCGGCTGTGT GCCCGAGGCC TCACCCTGCC CTCGCCTAGT CTGGAAGCTC CGACCGACAT CACGGAGCAG CCTTCAAGCA 001680
001681 TTCCATTACG CCCCATCTCG CTCTGTGCCC CTCCCCACCA GGGCTTCAGC AGGAGCCCTG GACTCATCAT CAATAAACAC 001760
001761 TGTTACAGCA A
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