Difference between revisions of "NONHSAT114816"

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sequence = <dnaseq>TTTTTTTTTTTTTTTTTAGGTTTATTGAAACAAATGAGAATCTGTCAGCAGAAATGTCCTTTAAAATCACCCTTACTTTTGAAGAGTCACATAGAAGAGTTAAGATATGGCTACTTTCCAACTGGTCTCCCGGGGAGGGTTTGGAGCAGTTAGAGGGTCCTGTGAAAGCAGAATGACATGAATCAAAATAAAACCAAACATACAAATGACACATTAAATAGTAGCCATGGGCTACCTTTCCTTTTCTGATTTCTCTGGTTAGAAACTAAATGCAGGAAAGAGATAAGTATCTGGAGACAGTGCTTGAGGTGTGCTTCCCATCAGAGAACCAAGGAATTTTCACTTTTTGGCTTTCTTTCTGGGACTCCCATATCAGGATCAAGAGACGAGTTGGTTCCTATAGTGGTTTCCAGTTTGCTGTGAGTGGTGAGAGTTCAGAGAACTTCGGCAGTGTGCTAGACTTGACTTTGCAGCACAGACACCCTCTTCTCTTCTTGTCTTTCATTTTGCCCCCTCCCATATACCTGGTACTCTCACACATTTCTCTTTCTCCAAACTTGAATAAAAATGACTCTCAGATTTTACATTCATCCTAAGGGAGAAATATTTGCAAAATCAGATGGACTCATGAGATCAGAAACCTGAAATGAAGAAATAAAACTCCATAGGCAGAATTCCAGGAATCATCCCGTTAGTGGGAGGGTTTTGAGTGGTTTTCTCTCCTTCCCTCTCTTTTCTTCTGCCTTTCTTTCATATCAAAAAGTCACAGACCTACTGCTTATTCTCCAGAAATGTACATCTAGTTAATGACACCATCCTACATAAACCAAATGTGAGCAATAATGACAATATAATAGCACCATGTATTCAGCATTTACTGAAACAATGTGCCAAGCAACTTAAATATGTCATCTCATTTAATTCTGAAAATAACAATTCTGTGATGTCAGTAGTAGTTATTTTCCTCAATCAGACAGAATGTGCATCCAAAATGACAAAGTCTCAATTTTTTATTTCAATGAAACCTATGTAATAGTAACTTACTTAATTCACCAGAATCCACAGCATCCAACCTGCCCTGTTCCAGATGTGCAACAACTGGGCTTTGAAAGAGTGTGACTAGAAAATCAAACAAGGCACGTGGACACACAAAGGAGATAAGAGGCTCCAAGAGATCACGTTCCTTTCTTGTGTAATTTCTTTCATCTAATTCTGTCAACATTTACTGGAAACCTCTATCTGGAACACAGATTACCTCAAGTAATCTGCCTGCCTCAGCCTCCCAAAGAACTGGGACTGCAGGCATGAGCCACCACGCCCAGACAATTTATAATCCTAGTGATCATGTTAGAACAACATCTGTTGTCAACCAATCATTGAGTATTTGTTGAGGATATTCTTCGTGCTACATTAAGTGAATGCAGGCAGCATATCAAGTCTCTACCTTTTTCACAACCTAGTTTGGTGAGATAATGTTAGTATAGATTAAGCAATTGTTACTAGTAAAAATCAGTATATTATTAATACTAAGTTGTGTGGCACAGACTAGAACTCTCAGAAAAGAGGCTGCAATCATAAATATGGTGAGAGTCAGAGATCCTTCTGGGCTTTAAAGAAATGCTTAATCATAGACTGTGTACCTATCCCCCTGCTGAACAAGACACATCCTTAGTTTCAAGACAGACTGGGGTTTGGGAATATGGGTAGCTCTGTGCTAATGCATCACCCCACTGAGGAAACAGGGTTTGTATTCTACTTACTGTGGCTTCATTGCATAAATTTTATGCTCATTGGAGAGAATATTTACTCACAATCTAGCCCATCCATTCTTATAAAAGAGACCTCTGAAAGCTAAGAGTCACTTTCCTGAGGGAAATGCAAGACTCTGGGAGAGAGAGGGCACTTTGAGAATGGGAAAATTGCCTGTGAAATCAAATTTAGGCGAAAAGATAGCCCAGCAGCCATATGTAAATCATTCCCTCATGTAGGAACAATGCTGTGCACTTGGTAATTCAATAGAAAACATTAGTCATTTATCATCCTTAATTATCAGTCATCTCTAACTGCATCTGGTTTGCATTTTTTATTAGAAAGGTTTTTTTTTTTTTGAGTTGGACTCAGGCATTTTTTTTCTTCCGTTCCTGATTTCATTTTGTTATTCTTTTTAAAATTCCATCACTAATTCCCATGATGTGAAGAGGTTTCTATTTCATAAGACACAATAAATCAAGCAACGCCTCTGTTGTATGGCTGTATTCAACAATTGGCTCATGAAACTTCTGCAAATTTAACACCATGCTCTTGTGAGCTGGAGTGAGCTGGCATGAGCACACTACTGCCCGTATTTAATGAGGTTGAGATGCCACAGCTTCCAAGGCATGAGGAGGAGGAGGGAATCTGAAGACAGACAAATAGGAATGTTGAAGTGGCTGTATCATGCTAACTGCACACTCATTCCCGACTACATTCCTCTAGAAAGCCCACAAGATATCTTCTTCACTAAGACTTCGATTTTTAAAAATTTTATTTCTTGTTATTTTGTTTTAGTTTAGTAGTACCTTAGGAGGAAGGCAAGGGCTGAAAAACTACCTATTGAGTACTGTGCTCACGACCTGGGTGAAGGAATCATTTGTACTCCAGACCCCAATGACATGCAATCTACCCAAGTAACAAACCTGCACATGTACCTCCAAACCTAAAATAAAAGTTGAAAATGGAAAGAAAAAAAAAAGATTTTGAACTATGCGTTGGTGAAGGGATCACCAGCATCCTTGCAAAGCTCCGTGGTAAGCTAACTATGACCATGGAGGATGTGCCATTGATATGAGGATTCTGATTTCAATAGGGATGGTGTTACAGAGTTAAGTTCATGATCTTTGGCATTGCATACTAGGTCTTTCATACTTGATTCCTGTTCACTTCTTTGTCTTATCTTGATCACTTCCTCTATTCTCTAAGTTTCATTACATCACGTGACTTTAAGTATTTGTATATATTTCTTCCTCTGAAGGCCTGTGGTGATCTTT</dnaseq>|
 
sequence = <dnaseq>TTTTTTTTTTTTTTTTTAGGTTTATTGAAACAAATGAGAATCTGTCAGCAGAAATGTCCTTTAAAATCACCCTTACTTTTGAAGAGTCACATAGAAGAGTTAAGATATGGCTACTTTCCAACTGGTCTCCCGGGGAGGGTTTGGAGCAGTTAGAGGGTCCTGTGAAAGCAGAATGACATGAATCAAAATAAAACCAAACATACAAATGACACATTAAATAGTAGCCATGGGCTACCTTTCCTTTTCTGATTTCTCTGGTTAGAAACTAAATGCAGGAAAGAGATAAGTATCTGGAGACAGTGCTTGAGGTGTGCTTCCCATCAGAGAACCAAGGAATTTTCACTTTTTGGCTTTCTTTCTGGGACTCCCATATCAGGATCAAGAGACGAGTTGGTTCCTATAGTGGTTTCCAGTTTGCTGTGAGTGGTGAGAGTTCAGAGAACTTCGGCAGTGTGCTAGACTTGACTTTGCAGCACAGACACCCTCTTCTCTTCTTGTCTTTCATTTTGCCCCCTCCCATATACCTGGTACTCTCACACATTTCTCTTTCTCCAAACTTGAATAAAAATGACTCTCAGATTTTACATTCATCCTAAGGGAGAAATATTTGCAAAATCAGATGGACTCATGAGATCAGAAACCTGAAATGAAGAAATAAAACTCCATAGGCAGAATTCCAGGAATCATCCCGTTAGTGGGAGGGTTTTGAGTGGTTTTCTCTCCTTCCCTCTCTTTTCTTCTGCCTTTCTTTCATATCAAAAAGTCACAGACCTACTGCTTATTCTCCAGAAATGTACATCTAGTTAATGACACCATCCTACATAAACCAAATGTGAGCAATAATGACAATATAATAGCACCATGTATTCAGCATTTACTGAAACAATGTGCCAAGCAACTTAAATATGTCATCTCATTTAATTCTGAAAATAACAATTCTGTGATGTCAGTAGTAGTTATTTTCCTCAATCAGACAGAATGTGCATCCAAAATGACAAAGTCTCAATTTTTTATTTCAATGAAACCTATGTAATAGTAACTTACTTAATTCACCAGAATCCACAGCATCCAACCTGCCCTGTTCCAGATGTGCAACAACTGGGCTTTGAAAGAGTGTGACTAGAAAATCAAACAAGGCACGTGGACACACAAAGGAGATAAGAGGCTCCAAGAGATCACGTTCCTTTCTTGTGTAATTTCTTTCATCTAATTCTGTCAACATTTACTGGAAACCTCTATCTGGAACACAGATTACCTCAAGTAATCTGCCTGCCTCAGCCTCCCAAAGAACTGGGACTGCAGGCATGAGCCACCACGCCCAGACAATTTATAATCCTAGTGATCATGTTAGAACAACATCTGTTGTCAACCAATCATTGAGTATTTGTTGAGGATATTCTTCGTGCTACATTAAGTGAATGCAGGCAGCATATCAAGTCTCTACCTTTTTCACAACCTAGTTTGGTGAGATAATGTTAGTATAGATTAAGCAATTGTTACTAGTAAAAATCAGTATATTATTAATACTAAGTTGTGTGGCACAGACTAGAACTCTCAGAAAAGAGGCTGCAATCATAAATATGGTGAGAGTCAGAGATCCTTCTGGGCTTTAAAGAAATGCTTAATCATAGACTGTGTACCTATCCCCCTGCTGAACAAGACACATCCTTAGTTTCAAGACAGACTGGGGTTTGGGAATATGGGTAGCTCTGTGCTAATGCATCACCCCACTGAGGAAACAGGGTTTGTATTCTACTTACTGTGGCTTCATTGCATAAATTTTATGCTCATTGGAGAGAATATTTACTCACAATCTAGCCCATCCATTCTTATAAAAGAGACCTCTGAAAGCTAAGAGTCACTTTCCTGAGGGAAATGCAAGACTCTGGGAGAGAGAGGGCACTTTGAGAATGGGAAAATTGCCTGTGAAATCAAATTTAGGCGAAAAGATAGCCCAGCAGCCATATGTAAATCATTCCCTCATGTAGGAACAATGCTGTGCACTTGGTAATTCAATAGAAAACATTAGTCATTTATCATCCTTAATTATCAGTCATCTCTAACTGCATCTGGTTTGCATTTTTTATTAGAAAGGTTTTTTTTTTTTTGAGTTGGACTCAGGCATTTTTTTTCTTCCGTTCCTGATTTCATTTTGTTATTCTTTTTAAAATTCCATCACTAATTCCCATGATGTGAAGAGGTTTCTATTTCATAAGACACAATAAATCAAGCAACGCCTCTGTTGTATGGCTGTATTCAACAATTGGCTCATGAAACTTCTGCAAATTTAACACCATGCTCTTGTGAGCTGGAGTGAGCTGGCATGAGCACACTACTGCCCGTATTTAATGAGGTTGAGATGCCACAGCTTCCAAGGCATGAGGAGGAGGAGGGAATCTGAAGACAGACAAATAGGAATGTTGAAGTGGCTGTATCATGCTAACTGCACACTCATTCCCGACTACATTCCTCTAGAAAGCCCACAAGATATCTTCTTCACTAAGACTTCGATTTTTAAAAATTTTATTTCTTGTTATTTTGTTTTAGTTTAGTAGTACCTTAGGAGGAAGGCAAGGGCTGAAAAACTACCTATTGAGTACTGTGCTCACGACCTGGGTGAAGGAATCATTTGTACTCCAGACCCCAATGACATGCAATCTACCCAAGTAACAAACCTGCACATGTACCTCCAAACCTAAAATAAAAGTTGAAAATGGAAAGAAAAAAAAAAGATTTTGAACTATGCGTTGGTGAAGGGATCACCAGCATCCTTGCAAAGCTCCGTGGTAAGCTAACTATGACCATGGAGGATGTGCCATTGATATGAGGATTCTGATTTCAATAGGGATGGTGTTACAGAGTTAAGTTCATGATCTTTGGCATTGCATACTAGGTCTTTCATACTTGATTCCTGTTCACTTCTTTGTCTTATCTTGATCACTTCCTCTATTCTCTAAGTTTCATTACATCACGTGACTTTAAGTATTTGTATATATTTCTTCCTCTGAAGGCCTGTGGTGATCTTT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:NONHSAG044774]]

Revision as of 12:15, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT114816

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3026 nt

Genomic location

chr6+:126391002..126407973

Exon number

5

Exons

126391002..126391956,126395808..126395914,126398511..126399696,126400408..126401013,126407801..126407973

Genome context

Sequence
000001 TTTTTTTTTT TTTTTTTAGG TTTATTGAAA CAAATGAGAA TCTGTCAGCA GAAATGTCCT TTAAAATCAC CCTTACTTTT 000080
000081 GAAGAGTCAC ATAGAAGAGT TAAGATATGG CTACTTTCCA ACTGGTCTCC CGGGGAGGGT TTGGAGCAGT TAGAGGGTCC 000160
000161 TGTGAAAGCA GAATGACATG AATCAAAATA AAACCAAACA TACAAATGAC ACATTAAATA GTAGCCATGG GCTACCTTTC 000240
000241 CTTTTCTGAT TTCTCTGGTT AGAAACTAAA TGCAGGAAAG AGATAAGTAT CTGGAGACAG TGCTTGAGGT GTGCTTCCCA 000320
000321 TCAGAGAACC AAGGAATTTT CACTTTTTGG CTTTCTTTCT GGGACTCCCA TATCAGGATC AAGAGACGAG TTGGTTCCTA 000400
000401 TAGTGGTTTC CAGTTTGCTG TGAGTGGTGA GAGTTCAGAG AACTTCGGCA GTGTGCTAGA CTTGACTTTG CAGCACAGAC 000480
000481 ACCCTCTTCT CTTCTTGTCT TTCATTTTGC CCCCTCCCAT ATACCTGGTA CTCTCACACA TTTCTCTTTC TCCAAACTTG 000560
000561 AATAAAAATG ACTCTCAGAT TTTACATTCA TCCTAAGGGA GAAATATTTG CAAAATCAGA TGGACTCATG AGATCAGAAA 000640
000641 CCTGAAATGA AGAAATAAAA CTCCATAGGC AGAATTCCAG GAATCATCCC GTTAGTGGGA GGGTTTTGAG TGGTTTTCTC 000720
000721 TCCTTCCCTC TCTTTTCTTC TGCCTTTCTT TCATATCAAA AAGTCACAGA CCTACTGCTT ATTCTCCAGA AATGTACATC 000800
000801 TAGTTAATGA CACCATCCTA CATAAACCAA ATGTGAGCAA TAATGACAAT ATAATAGCAC CATGTATTCA GCATTTACTG 000880
000881 AAACAATGTG CCAAGCAACT TAAATATGTC ATCTCATTTA ATTCTGAAAA TAACAATTCT GTGATGTCAG TAGTAGTTAT 000960
000961 TTTCCTCAAT CAGACAGAAT GTGCATCCAA AATGACAAAG TCTCAATTTT TTATTTCAAT GAAACCTATG TAATAGTAAC 001040
001041 TTACTTAATT CACCAGAATC CACAGCATCC AACCTGCCCT GTTCCAGATG TGCAACAACT GGGCTTTGAA AGAGTGTGAC 001120
001121 TAGAAAATCA AACAAGGCAC GTGGACACAC AAAGGAGATA AGAGGCTCCA AGAGATCACG TTCCTTTCTT GTGTAATTTC 001200
001201 TTTCATCTAA TTCTGTCAAC ATTTACTGGA AACCTCTATC TGGAACACAG ATTACCTCAA GTAATCTGCC TGCCTCAGCC 001280
001281 TCCCAAAGAA CTGGGACTGC AGGCATGAGC CACCACGCCC AGACAATTTA TAATCCTAGT GATCATGTTA GAACAACATC 001360
001361 TGTTGTCAAC CAATCATTGA GTATTTGTTG AGGATATTCT TCGTGCTACA TTAAGTGAAT GCAGGCAGCA TATCAAGTCT 001440
001441 CTACCTTTTT CACAACCTAG TTTGGTGAGA TAATGTTAGT ATAGATTAAG CAATTGTTAC TAGTAAAAAT CAGTATATTA 001520
001521 TTAATACTAA GTTGTGTGGC ACAGACTAGA ACTCTCAGAA AAGAGGCTGC AATCATAAAT ATGGTGAGAG TCAGAGATCC 001600
001601 TTCTGGGCTT TAAAGAAATG CTTAATCATA GACTGTGTAC CTATCCCCCT GCTGAACAAG ACACATCCTT AGTTTCAAGA 001680
001681 CAGACTGGGG TTTGGGAATA TGGGTAGCTC TGTGCTAATG CATCACCCCA CTGAGGAAAC AGGGTTTGTA TTCTACTTAC 001760
001761 TGTGGCTTCA TTGCATAAAT TTTATGCTCA TTGGAGAGAA TATTTACTCA CAATCTAGCC CATCCATTCT TATAAAAGAG 001840
001841 ACCTCTGAAA GCTAAGAGTC ACTTTCCTGA GGGAAATGCA AGACTCTGGG AGAGAGAGGG CACTTTGAGA ATGGGAAAAT 001920
001921 TGCCTGTGAA ATCAAATTTA GGCGAAAAGA TAGCCCAGCA GCCATATGTA AATCATTCCC TCATGTAGGA ACAATGCTGT 002000
002001 GCACTTGGTA ATTCAATAGA AAACATTAGT CATTTATCAT CCTTAATTAT CAGTCATCTC TAACTGCATC TGGTTTGCAT 002080
002081 TTTTTATTAG AAAGGTTTTT TTTTTTTTGA GTTGGACTCA GGCATTTTTT TTCTTCCGTT CCTGATTTCA TTTTGTTATT 002160
002161 CTTTTTAAAA TTCCATCACT AATTCCCATG ATGTGAAGAG GTTTCTATTT CATAAGACAC AATAAATCAA GCAACGCCTC 002240
002241 TGTTGTATGG CTGTATTCAA CAATTGGCTC ATGAAACTTC TGCAAATTTA ACACCATGCT CTTGTGAGCT GGAGTGAGCT 002320
002321 GGCATGAGCA CACTACTGCC CGTATTTAAT GAGGTTGAGA TGCCACAGCT TCCAAGGCAT GAGGAGGAGG AGGGAATCTG 002400
002401 AAGACAGACA AATAGGAATG TTGAAGTGGC TGTATCATGC TAACTGCACA CTCATTCCCG ACTACATTCC TCTAGAAAGC 002480
002481 CCACAAGATA TCTTCTTCAC TAAGACTTCG ATTTTTAAAA ATTTTATTTC TTGTTATTTT GTTTTAGTTT AGTAGTACCT 002560
002561 TAGGAGGAAG GCAAGGGCTG AAAAACTACC TATTGAGTAC TGTGCTCACG ACCTGGGTGA AGGAATCATT TGTACTCCAG 002640
002641 ACCCCAATGA CATGCAATCT ACCCAAGTAA CAAACCTGCA CATGTACCTC CAAACCTAAA ATAAAAGTTG AAAATGGAAA 002720
002721 GAAAAAAAAA AGATTTTGAA CTATGCGTTG GTGAAGGGAT CACCAGCATC CTTGCAAAGC TCCGTGGTAA GCTAACTATG 002800
002801 ACCATGGAGG ATGTGCCATT GATATGAGGA TTCTGATTTC AATAGGGATG GTGTTACAGA GTTAAGTTCA TGATCTTTGG 002880
002881 CATTGCATAC TAGGTCTTTC ATACTTGATT CCTGTTCACT TCTTTGTCTT ATCTTGATCA CTTCCTCTAT TCTCTAAGTT 002960
002961 TCATTACATC ACGTGACTTT AAGTATTTGT ATATATTTCT TCCTCTGAAG GCCTGTGGTG ATCTTT
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