Difference between revisions of "Lnc-SLC39A11-1:25"

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sequence = <dnaseq>CCGGGCTGGACGGTTGGGAAGGAAGGTCGTGGACAACAAAGTAATGAACAAAAATATGTTTCACGCATGAGAAGCTGTCCGAGATGGCAGTGAGGGAGAGGTCATGGCAAACGGTGTTTATGGCATGGAAAAGTGAAGATTCAAAAAAAAACCCAAGGAGAGGCCAAGATAGTGTGGAAAATATCCACCCCCTCCCAGAGACAGCTCATTAGGAAGGTTTTGGAGGGAGACTCGCAGGAGGTCAGGGGCTGCTGTGTTATCTTTGGAGGAAAGGCCATCCCTTCTCTTCCCCTCCGCAGACGTATCCAGTGAGACAACTCTCTCCCCAGCAAGCTTTTCTCAGGGAGCAGGCAGTTTCTTGAAAAAATGAACCAGATGAGGATCCACCCACCTCCAGAAACAAAGACTGTGGCTGTCTCCAAGAATGAAGCACCAGTCTCTTAGTTGGTATCCCCAGGAGACCAAGTGAGTAGGTATTACAAATATAATCAGGGAAAAGAAGCTATTTTAAAAAATCGGTCATTGGGCAGGATGTTCCAAAGGGCAGATGAATGTAACTTCCAAGATGAAGTAACCGGATGTCTGTCAACTCAGAAAACAAGGTCCATGCAGGAGACCTCTCCAGGTACACATATTTCCTGCTACTGAATGGCTTAGACTGGGATTTGCAAGGAACTACGAAGTCCAAGACCTTTGCCTTTCTTTTAGAAGAAGGCACCAGCTGGTTCTCCAATGTTGAAGGTCTTCTCCAGAGATACCTTAAGGTGTGGGGAGATTACAACTTGCTCAAGGTCTCATAGCTAGAAGATGTCAGAGTGATAACTCAAACCATGTCACATGACTCTAAGCCCAAAGCAGCCTCTAGAAGGTTGTTTGATCTTCTGATGGAAGCACAAATCACCATTCCAACATGAAAGATGGAGAAACTTAAGTCTAGAGAGATTTAAAGGACTTGTCAAAGGCAATGAAACAAG</dnaseq>|
 
sequence = <dnaseq>CCGGGCTGGACGGTTGGGAAGGAAGGTCGTGGACAACAAAGTAATGAACAAAAATATGTTTCACGCATGAGAAGCTGTCCGAGATGGCAGTGAGGGAGAGGTCATGGCAAACGGTGTTTATGGCATGGAAAAGTGAAGATTCAAAAAAAAACCCAAGGAGAGGCCAAGATAGTGTGGAAAATATCCACCCCCTCCCAGAGACAGCTCATTAGGAAGGTTTTGGAGGGAGACTCGCAGGAGGTCAGGGGCTGCTGTGTTATCTTTGGAGGAAAGGCCATCCCTTCTCTTCCCCTCCGCAGACGTATCCAGTGAGACAACTCTCTCCCCAGCAAGCTTTTCTCAGGGAGCAGGCAGTTTCTTGAAAAAATGAACCAGATGAGGATCCACCCACCTCCAGAAACAAAGACTGTGGCTGTCTCCAAGAATGAAGCACCAGTCTCTTAGTTGGTATCCCCAGGAGACCAAGTGAGTAGGTATTACAAATATAATCAGGGAAAAGAAGCTATTTTAAAAAATCGGTCATTGGGCAGGATGTTCCAAAGGGCAGATGAATGTAACTTCCAAGATGAAGTAACCGGATGTCTGTCAACTCAGAAAACAAGGTCCATGCAGGAGACCTCTCCAGGTACACATATTTCCTGCTACTGAATGGCTTAGACTGGGATTTGCAAGGAACTACGAAGTCCAAGACCTTTGCCTTTCTTTTAGAAGAAGGCACCAGCTGGTTCTCCAATGTTGAAGGTCTTCTCCAGAGATACCTTAAGGTGTGGGGAGATTACAACTTGCTCAAGGTCTCATAGCTAGAAGATGTCAGAGTGATAACTCAAACCATGTCACATGACTCTAAGCCCAAAGCAGCCTCTAGAAGGTTGTTTGATCTTCTGATGGAAGCACAAATCACCATTCCAACATGAAAGATGGAGAAACTTAAGTCTAGAGAGATTTAAAGGACTTGTCAAAGGCAATGAAACAAG</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-SLC39A11-1]]
+
[[Category:Intergenic]][[Category:lnc-SLC39A11-1]][[Category:NONHSAG022655]]

Revision as of 12:19, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-SLC39A11-1:25

Source

LNCipedia2.1

Same with

NONHSAT055677

Classification

intergenic

Length

974 nt

Genomic location

chr17-:70320575..70338712

Exon number

4

Exons

70320575..70320792,70321934..70322085,70337178..70337315,70338247..70338712

Genome context

Sequence
000001 CCGGGCTGGA CGGTTGGGAA GGAAGGTCGT GGACAACAAA GTAATGAACA AAAATATGTT TCACGCATGA GAAGCTGTCC 000080
000081 GAGATGGCAG TGAGGGAGAG GTCATGGCAA ACGGTGTTTA TGGCATGGAA AAGTGAAGAT TCAAAAAAAA ACCCAAGGAG 000160
000161 AGGCCAAGAT AGTGTGGAAA ATATCCACCC CCTCCCAGAG ACAGCTCATT AGGAAGGTTT TGGAGGGAGA CTCGCAGGAG 000240
000241 GTCAGGGGCT GCTGTGTTAT CTTTGGAGGA AAGGCCATCC CTTCTCTTCC CCTCCGCAGA CGTATCCAGT GAGACAACTC 000320
000321 TCTCCCCAGC AAGCTTTTCT CAGGGAGCAG GCAGTTTCTT GAAAAAATGA ACCAGATGAG GATCCACCCA CCTCCAGAAA 000400
000401 CAAAGACTGT GGCTGTCTCC AAGAATGAAG CACCAGTCTC TTAGTTGGTA TCCCCAGGAG ACCAAGTGAG TAGGTATTAC 000480
000481 AAATATAATC AGGGAAAAGA AGCTATTTTA AAAAATCGGT CATTGGGCAG GATGTTCCAA AGGGCAGATG AATGTAACTT 000560
000561 CCAAGATGAA GTAACCGGAT GTCTGTCAAC TCAGAAAACA AGGTCCATGC AGGAGACCTC TCCAGGTACA CATATTTCCT 000640
000641 GCTACTGAAT GGCTTAGACT GGGATTTGCA AGGAACTACG AAGTCCAAGA CCTTTGCCTT TCTTTTAGAA GAAGGCACCA 000720
000721 GCTGGTTCTC CAATGTTGAA GGTCTTCTCC AGAGATACCT TAAGGTGTGG GGAGATTACA ACTTGCTCAA GGTCTCATAG 000800
000801 CTAGAAGATG TCAGAGTGAT AACTCAAACC ATGTCACATG ACTCTAAGCC CAAAGCAGCC TCTAGAAGGT TGTTTGATCT 000880
000881 TCTGATGGAA GCACAAATCA CCATTCCAAC ATGAAAGATG GAGAAACTTA AGTCTAGAGA GATTTAAAGG ACTTGTCAAA 000960
000961 GGCAATGAAA CAAG
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