Difference between revisions of "NONHSAT115666"
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==Annotated Information==
===Transcriptomic Nomeclature===
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Revision as of 12:35, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT115666 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
overlapping(AS),sense |
| Length |
444 nt |
| Genomic location |
chr6-:155579111..155606333 |
| Exon number |
3 |
| Exons |
155579111..155579216,155581407..155581702,155606292..155606333 |
| Genome context |
|
| Sequence |
000001 ATCTTTACGA TTCCAGGACA AGCTTTTGTC CCCAAACCAG AGAATGTACC ATCTTCCATG CCTAGAGATG AAACCGAAGT 000080
000081 ACGTGGAAAG GTCTGTTTAT GAAAACAGGC TGTTGACAGC CCATCCTCCT GTTTTACAAG GATGAGTTGA TTGATCACAC 000160 000161 TATGCCACAT ATCATGCCAC AGAATGATAA TATGTTTGCT TACAACGAAG GTGGACGTGG GCGTGGTGCA CTTCACTCCC 000240 000241 TTGATACAGC CCAAGATAGA GCAGCCATTC AAGCTGGTGG AAAAAGTGGT TCAGAATGTA TTTCAGTTCC GAAGGAAATA 000320 000321 CTGCCATCGA GGGCTCAGAA TGTTATTCCC TGAAGCGCAG CGCTTGGAAA GCACGGGCAG GCTGTTAGAG TTGGCAGACA 000400 000401 TAGACCCTAC TCTTCGGCCC CGCCAGCTCT CCATCTCACA CTTT |
Predicted Small Protein
| Name | NONHSAT115666_smProtein_161:352 |
| Length | 64 |
| Molecular weight | 6704.4842 |
| Aromaticity | 0.031746031746 |
| Instability index | 59.7412698413 |
| Isoelectric point | 6.70330810547 |
| Runs | 11 |
| Runs residual | 0.0296404275996 |
| Runs probability | 0.0387981564452 |
| Amino acid sequence | MPHIMPQNDNMFAYNEGGRGRGALHSLDTAQDRAAIQAGGKSGSECISVPKEILPSRAQN VIP |
| Secondary structure | LLLLLLLLLLLEEELLLLLLEEEELLLLHHHHHHHHHHLLLLLLEEEELLLLLLLLHHHL LLL |
| PRMN | - |
| PiMo | - |
