Difference between revisions of "NONHSAT135276"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| Line 42: | Line 42: | ||
sequence = <dnaseq>GGGGCTCAGTGTTCTGTTGAGTCTGTTTGAATGTTATCCCTTCAGTAATCCTTAGGGATAGGGAAATGAGTACGTGAGTCAACTTGTGATTTGTGATTCTCTCAGTGTTTAGAGCCTCTTCATGTACTGTACAATGCCGATCCTGGTGCCAGTGCCTGACAGACGTTTCCTGTTTGACCTTTTCTCCTGCAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGACTTTTGAAGAAGTGGTCAAG</dnaseq>| | sequence = <dnaseq>GGGGCTCAGTGTTCTGTTGAGTCTGTTTGAATGTTATCCCTTCAGTAATCCTTAGGGATAGGGAAATGAGTACGTGAGTCAACTTGTGATTTGTGATTCTCTCAGTGTTTAGAGCCTCTTCATGTACTGTACAATGCCGATCCTGGTGCCAGTGCCTGACAGACGTTTCCTGTTTGACCTTTTCTCCTGCAGATGGACACTGACGTCGTTGTCCTCACAACAGGCGTCTTGGTGTTGATAACCATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGCCACGTGGCGGAAGTCTATCTCGTCCATCTCCATGCCAGTGTGTACGCACTCTTTCATCGCCTTTATGGAATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGGAGACTTTTGAAGAAGTGGTCAAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG053674]] |
Revision as of 12:37, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT135276 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
492 nt |
| Genomic location |
chr9-:135797206..135799071 |
| Exon number |
2 |
| Exons |
135797206..135797360,135798735..135799071 |
| Genome context |
|
| Sequence |
000001 GGGGCTCAGT GTTCTGTTGA GTCTGTTTGA ATGTTATCCC TTCAGTAATC CTTAGGGATA GGGAAATGAG TACGTGAGTC 000080
000081 AACTTGTGAT TTGTGATTCT CTCAGTGTTT AGAGCCTCTT CATGTACTGT ACAATGCCGA TCCTGGTGCC AGTGCCTGAC 000160 000161 AGACGTTTCC TGTTTGACCT TTTCTCCTGC AGATGGACAC TGACGTCGTT GTCCTCACAA CAGGCGTCTT GGTGTTGATA 000240 000241 ACCATGCTAC CAATGATTCC ACAGTCTGGG AAACAGCATC TTCTTGATTT CTTTGACATT TTTGGCCGTC TGTCATCATG 000320 000321 GTGCCTGAAG AAACCAGGCC ACGTGGCGGA AGTCTATCTC GTCCATCTCC ATGCCAGTGT GTACGCACTC TTTCATCGCC 000400 000401 TTTATGGAAT GTACCCTTGC AACTTCGTCT CCTTTTTGCG TTCTCATTAC AGTATGAAAG AAAACCTGGA GACTTTTGAA 000480 000481 GAAGTGGTCA AG |
Predicted Small Protein
| Name | NONHSAT135276_smProtein_317:478 |
| Length | 54 |
| Molecular weight | 6061.9713 |
| Aromaticity | 0.0943396226415 |
| Instability index | 71.9150943396 |
| Isoelectric point | 9.49090576172 |
| Runs | 6 |
| Runs residual | 0.0470547630005 |
| Runs probability | 0.0375816993465 |
| Amino acid sequence | MVPEETRPRGGSLSRPSPCQCVRTLSSPLWNVPLQLRLLFAFSLQYERKPGDF |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLHHHHHHHHHHHHHHEELLLLL |
| PRMN | - |
| PiMo | - |
